Leptinotarsa decemlineata (Colorado potato beetle): 111509058
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Entry
111509058 CDS
T07512
Name
(RefSeq) TFIIH basal transcription factor complex helicase XPD subunit
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
ldc
Leptinotarsa decemlineata (Colorado potato beetle)
Pathway
ldc03022
Basal transcription factors
ldc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ldc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111509058
09124 Replication and repair
03420 Nucleotide excision repair
111509058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ldc03021
]
111509058
03036 Chromosome and associated proteins [BR:
ldc03036
]
111509058
03400 DNA repair and recombination proteins [BR:
ldc03400
]
111509058
Enzymes [BR:
ldc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
111509058
Transcription machinery [BR:
ldc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111509058
Chromosome and associated proteins [BR:
ldc03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
111509058
DNA repair and recombination proteins [BR:
ldc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111509058
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
DEAD
nSTAND3
AAA_11
SLFN-g3_helicase
UvrD-helicase
NAMPT_N
PhoH
Exog_C
Motif
Other DBs
NCBI-GeneID:
111509058
NCBI-ProteinID:
XP_023020502
LinkDB
All DBs
Position
Unknown
AA seq
759 aa
AA seq
DB search
MRLSVDGLIVYFPYDYIYPEQYSYMCELKKALDAKGHCLLEMPSGTGKTVTLLALIVAYM
RENPHEVRKLIYCSRTVPEIEKVMEELKKLLLYYEKLDGQYPNFSGLVLSSRKNLCIHPQ
VSSEREGKIVDGKCHSLTASYIRERHSHDDSTPICQFYEGFSLDGKESTLPHGVYSLEDL
KQFGRDRNWCPYFLARFAITYANIVVYSYHYLLDPKIADVVSKELAKEAIVVFDEAHNID
NVCIDSMSVKIHKRTIEKASANIQLLEKTVAEMREDDHKKLQEEYQRLVQGLRDASLARE
TDVILSNPVLPEEILQEAVPGNIRNAEHFISFLKCFVEYIKTRLRVQHVVQESPIGFLKD
VQAKVCIERKPLRFCAERLASLLRTLEISDLTDFSPIILITHLATLVSTYTKGFTIIIEP
FDDKTPTVSNPIFYFSCLDCSIAIKPVFDRFQTVVITSGTLSPLDMYPKILNFHPVIMTS
FTMTLARPCLLPMIVSKGNDQVAISSKFETRDDNAVIRNYGQLLVEVAANVPDGIVCFFT
SYMYLESVVASWYDQGVIDSLQRYKLLFIETQDSAETSFALMYYIKACESGRGAVLLSVA
RGKVSEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLDYLRDQFQIRENDFLTFDALRHA
SQCVGRAIRGKTDYGIMIFADKRFSRADKRTKLPKWIQEHLKDSYCNLSTEEAIQLAKRW
LRQMAQPFTREDQLGVSLLTLEQLQELEAKKRDEQSKAD
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaggctgagcgtagacggcctaattgtatatttcccttatgactacatttatcccgag
caatactcgtatatgtgtgagttaaaaaaagctctagatgccaagggccactgtttattg
gaaatgccttcagggacaggaaagacagtcacactattggctcttatagtggcttatatg
agggaaaatcctcacgaagtgaggaaactcatttactgttcgagaactgtacctgaaatc
gagaaagtcatggaggaattgaagaaacttttactctattatgaaaaactagacggtcag
tatcctaatttctccggacttgttctgtcgtcgcgaaagaatctttgcatacatccccaa
gtcagttcggagagggaaggaaaaatcgtggatggaaaatgccattctctgactgcgagt
tatattagagaaagacacagccatgatgacagtactcctatatgtcagttctacgaagga
ttttctttggacgggaaggaatctactttaccccatggcgtatacagtttggaagacttg
aaacagttcggtagagacaggaattggtgtccatatttcctagcacgatttgccattaca
tacgccaatatcgttgtctacagctaccactacctcttggatccaaagatagctgatgtg
gtgtctaaggaattggccaaggaggctatcgtagtgtttgacgaagctcataacatagac
aacgtctgcattgattctatgagtgttaaaattcataaaagaactattgaaaaagcttct
gcaaatatccagctgttggaaaaaacagttgctgaaatgagggaagacgaccacaaaaaa
ctccaggaggaatatcagaggctagttcaaggactgagagatgcaagcttagccagagaa
actgatgtaatactttccaatcctgttctacctgaagaaattctccaagaagctgttccc
ggtaacataaggaatgcagagcacttcataagttttctgaaatgttttgtagagtatata
aaaacacggttaagggtgcaacatgtggtgcaagaatccccaatagggtttttgaaggat
gtgcaggccaaagtgtgtatagagcgtaagccgctgaggttttgtgctgagagactggct
tcattgctgagaacacttgaaatttcagatctgaccgactttagtcctattattctcata
acacacctggctactttggtatccacttacaccaaggggttcaccataataatagagcct
ttcgatgataaaacccccaccgtttccaatcccattttttatttcagctgcttggactgc
tcgatagcaatcaaacctgtgttcgataggtttcagacagtagtgataacttctgggaca
ctgtcacccttagatatgtacccaaaaatcctcaacttccatccagtcatcatgacttcc
tttaccatgaccctggcaaggccttgtctacttcctatgatcgtctcgaaaggcaacgat
caagtagctatatcttccaaattcgaaaccagagacgataacgctgtgatacgtaactac
ggtcaacttctcgttgaagtagcagccaacgtaccagatggaatagtttgttttttcact
tcctacatgtaccttgagtctgttgtggcaagttggtatgatcaaggggtcatcgatagt
ttacagaggtataagctgctcttcatagaaacccaggattcagcagaaactagttttgcc
ttgatgtactacatcaaagcctgcgagtcagggcgaggcgcagttctgttatctgtagct
agaggcaaagtatcagagggggtagatttcgatcatcatctaggcagagccgttttgatg
tttggtattccttacgtttacacccagtcgaggatattgaaggctagattagactattta
cgagatcaattccagattcgtgagaacgactttttaaccttcgatgctttgagacatgct
tcgcaatgcgtagggagagccatcagagggaaaactgactatggtatcatgatttttgca
gataaacggttttctagggcagacaagagaaccaaattgcccaaatggatccaagaacat
ttgaaggactcttactgtaacttatccacagaagaagccatacaattggcaaagagatgg
ctcagacaaatggctcagccttttacgagggaggaccagttgggggtttctttgctcaca
ctggaacagctccaagaattggaagcaaagaaaagagatgaacaatctaaagcagactag
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integrated database retrieval system
