Leptinotarsa decemlineata (Colorado potato beetle): 111509987
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Entry
111509987 CDS
T07512
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
ldc
Leptinotarsa decemlineata (Colorado potato beetle)
Pathway
ldc03018
RNA degradation
ldc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ldc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111509987
09123 Folding, sorting and degradation
03018 RNA degradation
111509987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ldc03019
]
111509987
03041 Spliceosome [BR:
ldc03041
]
111509987
Messenger RNA biogenesis [BR:
ldc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111509987
mRNA degradation factors
5'-3' decay
Lsm complex
111509987
Spliceosome [BR:
ldc03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
111509987
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
111509987
NCBI-ProteinID:
XP_023021618
LinkDB
All DBs
Position
Unknown
AA seq
136 aa
AA seq
DB search
MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEVIDMVKEDTIVKNKGRGDMRGGRGGANQRTRPAARGNFGGRGSKPG
GPGGRNPPFQKQKPKQ
NT seq
411 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctctgtcactgctgcgaacggcccaaaatcatcctatgctagttgaactgaaa
aatggtgaaacctacaatggacacttagtcagttgcgacaattggatgaatataaatctt
cgagaagttatttgcacttcacgggatggagataaattttggaggatgccagagtgctat
attcgtggaagtacaataaaatatcttcgaatccctgatgaagtcatcgacatggtgaaa
gaagatactatcgttaaaaacaaaggcaggggagatatgagaggtggaagaggtggagca
aatcaaagaaccaggccagcagctagaggtaacttcggaggtcgaggtagtaagcctggt
ggtcccggtggaagaaatcccccttttcagaaacaaaaacctaaacaataa
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