Leptinotarsa decemlineata (Colorado potato beetle): 111510082
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Entry
111510082 CDS
T07512
Name
(RefSeq) ATP-dependent RNA helicase WM6-like
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
ldc
Leptinotarsa decemlineata (Colorado potato beetle)
Pathway
ldc03013
Nucleocytoplasmic transport
ldc03015
mRNA surveillance pathway
ldc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ldc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111510082
09122 Translation
03013 Nucleocytoplasmic transport
111510082
03015 mRNA surveillance pathway
111510082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ldc03019
]
111510082
03041 Spliceosome [BR:
ldc03041
]
111510082
Enzymes [BR:
ldc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111510082
Messenger RNA biogenesis [BR:
ldc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111510082
Spliceosome [BR:
ldc03041
]
Complex C
Other components
EJC/TREX
111510082
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
111510082
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
ZNHIT3_C
Ned1_M
Motif
Other DBs
NCBI-GeneID:
111510082
NCBI-ProteinID:
XP_023021710
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MANVDTLLDYEDEVNTDQTTAEPTTNEVQEEGAKGAYVSIHSSGFRDFLLKSEILRAVVD
CGFEHPSEVQHECIPQAVIGMDILCQAKSGMGKTAVFVLATLQQLEPADNVVNVLVMCHT
RELAVQIGNEYKRFSKYMSSVEVGVFFGGMPIANDEEILRNKCPHIVVGTPGRILALVKS
KKLVLKNLKHFILDECDKMLELLDMRRDVQEIYRSTPHTKQVMMFSATLGRDIRQVCKKF
MQEPLEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKAAKRCVA
LEQLLTEENFPAIGIHRGMNQKERLSRYEQFKDFRKRILVATNLFGRGMDIERVNIAFNY
DMPENSDTYLHRVARAGRFGSKGLAITFVSGEGDVKILKKVQERFDVAITELPDEIDLSY
YIEGR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgtagatactcttttggactacgaagatgaagtgaataccgatcagactacc
gctgagcccacaactaatgaagtacaggaggaaggggccaaaggagcttacgtatccata
cacagttcaggctttagagattttttattgaaatcggaaattctaagagctgttgttgac
tgcggttttgaacacccttcagaagttcagcacgaatgtattcctcaggcagtcattggt
atggacattttatgtcaagccaaatcgggtatgggcaaaacggcagtgtttgttctggca
acactgcaacaactggaaccagcagataatgttgttaacgttttggtgatgtgccacact
cgcgaactggccgtccaaatcggcaatgagtacaagaggtttagtaaatacatgtccagt
gtcgaggtgggcgtctttttcggaggtatgcctattgctaacgacgaagaaatattgaga
aacaaatgtccgcacattgttgtaggtacgcctggacgtattctggcgctcgttaagtca
aagaagctagtccttaagaacctgaaacatttcatccttgacgagtgtgataaaatgttg
gaactattggatatgaggcgagacgtccaggaaatatacagaagcacccctcacaccaag
caagttatgatgttcagtgccacactcggccgtgacattaggcaagtgtgcaagaaattc
atgcaagagccactggaggtatatgtagatgatgaagccaaactgacgttgcatggatta
caacagcattacgttaaactcaaagaaaatgaaaagaataaaaaattatttgagttactc
gatgttctcgaattcaatcaggtggtaatttttgtgaaggccgctaaaaggtgtgtagct
ttggaacagttgctgactgaagagaatttcccagccatcggaattcacagaggaatgaac
cagaaagagaggctgtctcggtatgagcagttcaaagatttccggaagagaatattggta
gctacgaatctctttgggcgtggcatggacattgaaagggtcaacattgccttcaactat
gatatgccagaaaactccgatacctacttacacagagtggctagagcaggccggtttggt
tcaaaaggtttggccatcactttcgtttctggagagggggatgtcaagattttgaaaaag
gtccaagagagatttgatgttgctattacagagttacctgatgaaattgatctcagctac
tacattgagggtcgataa
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