Leptinotarsa decemlineata (Colorado potato beetle): 111510389
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Entry
111510389 CDS
T07512
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ldc
Leptinotarsa decemlineata (Colorado potato beetle)
Pathway
ldc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ldc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111510389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ldc03041
]
111510389
Enzymes [BR:
ldc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111510389
Spliceosome [BR:
ldc03041
]
Complex A
U2 snRNP components
U2 related factors
111510389
Complex B
111510389
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
CdAMP_rec
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
111510389
NCBI-ProteinID:
XP_023022065
LinkDB
All DBs
Position
Unknown
AA seq
1034 aa
AA seq
DB search
MVRGRDRSRSPERKRRRSRSRSKDRSKPGRYRRSRSREPRRRSRSRSKDRDRRERDRRSH
SRERDRSDRDRSERDRRGGDGKERRGGVGKSSRRRSRSRSKEKPKPDDSGLSFDPTNLDK
EEEQKKLELEMVKRRERIERWRAERKKKEQEAAKKEAQKSASSQNSTISQGTFKKWSLED
DSEDEDKIDKSEKEGEKDKEETEGNGHEEMKEKPDISTPEPKKEIEENIEDEADPLDEFM
KGVQAEVRKISKIDLKKPGEPNEKKGSLVIVTGVAKAKTNTNKGELIEQNQDGLEYSSEE
EQEDLKDTAASLANKQKKELAKIDHNTIIYNSFRKNFYVEVPEIAKMTHEEVEAYREEME
GIRVKGKGCPKPIKTWAQCGVSTKELSILKKLGYEKPTPIQAQAIPAIMSGRDLLGIAKT
GSGKTLAFLLPMFRHILDQPPLEDTDGPIAIIMTPTRELCMQIGKDIKKFTKSLGLHAVC
VYGGTGISEQIAELKRGAEIIVCTPGRMIDMLVANSGKVTNSRRVTYIVLDEADRMFDMG
FEPQVMRIIDTVRPDRQTVMFSATFPRQMEALARKLLQKPIEVQVGGRSVVCKEVEQNVV
IIEEDNKFLKLLELLGIYQELGSIIVFVDKQENADILLKELMRAAYNCLSLHGGIDQFDR
DSTIIDFKSGKVKLLIATSVAARGLDVKHLILVVNYDCPNHYEDYVHRCGRTGRAGNKGF
AYTFITPEQSRYAGDLIKAFELANVPVPENLRTLWETYKTKQESEGKKVHSGGGFSGKGF
KFDESEAAAINEKKKFQKAALGLADSDDEDLEHDIDQQIESMFATKRTVKEIKAPLGLIN
SSSMGNSNTAVDKLELAKRLASKINLTKNTIMDTKFATQQAAESILKGSGSQPPITAKTV
AEQLAAKLNTKLNYQPKDDDDRMDEDSEQTFRKYEEELEINDFPQQARWRVTSKEALAQI
SEYSEAGITVRGTYVPTGKSPPEGERKLYLAIESTSDIAVSKAKAEITRLIKEELLKLQT
AGHHTFNKARYKVV
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgaggccgagacaggagccgaagtccggagcggaaaagaagacgatcccgatct
agaagtaaggatagatctaaacctggcaggtacagaaggagccggtctagagaaccaagg
cggagaagtagatcacgttcaaaggatcgagatagaagagaacgagaccgtaggtcccac
agtcgcgaaagagatcgttctgatagggaccgttctgaaagggatagaagaggaggtgat
ggcaaagaaagacgtggaggtgttggaaagtccagcaggagaagatccaggtcaagatca
aaggagaaaccaaaaccagatgattcggggctgtcatttgatccaactaatttggataag
gaagaagaacagaaaaaactggaattggaaatggtgaagagaagggaaagaatagaacgt
tggagagctgaacgaaaaaagaaggaacaagaagctgctaaaaaagaggcacaaaaatct
gcctctagtcaaaattctacaatatctcaaggtaccttcaaaaagtggtcactagaggat
gattctgaagacgaagataagattgataaatctgaaaaagagggagagaaggataaagaa
gaaactgaaggaaatggacacgaagaaatgaaagagaaacctgatattagtacccctgag
cctaaaaaagaaattgaagaaaatatcgaagacgaagctgatcctttagatgaatttatg
aaaggggttcaagcagaggtacgaaaaatcagtaaaatagacctgaaaaaacctggtgaa
cctaatgaaaaaaaaggatctctagtcattgtaacaggtgtagccaaggctaaaacaaat
actaacaaaggtgaactcattgaacaaaatcaggacggacttgaatattcatctgaagaa
gaacaggaagatttgaaagatacagctgccagtttagctaacaaacaaaaaaaggaacta
gcaaaaatcgatcacaataccattatttacaattcttttaggaaaaatttttatgtggaa
gtgcctgaaattgccaagatgactcacgaggaagtagaggcctacagggaagaaatggaa
ggaatcagggtaaaaggtaaaggttgccctaaacctataaaaacttgggcacaatgtggt
gtttcaacgaaagaacttagcattttgaaaaaacttggttatgaaaaacctactccaatt
caagctcaggctattcctgccataatgtctggaagagaccttctaggaattgcaaaaact
ggaagcggcaagacattagctttccttttgccaatgttcaggcatattttggatcaacct
cctcttgaagatacagatggaccaatagctataataatgacacctacaagggaactatgt
atgcaaattggaaaagacatcaagaagttcacaaaaagtttgggtttacacgcagtatgt
gtttatggcggaactggcatttctgaacaaatcgcagaattgaagagaggtgctgaaata
attgtctgtacgccagggaggatgatagacatgctggtagcaaacagcggaaaggtaaca
aattcaaggcgagtaacatatatagttcttgatgaagcagacagaatgtttgacatggga
tttgaaccacaggtcatgagaattatcgataccgtcaggcctgatcgacaaacggtgatg
ttcagtgctacttttcctcgacagatggaagcgttagccagaaagttgttgcagaaacct
atcgaggttcaagtgggtggcagatcagtagtctgcaaagaagtggagcagaatgttgtt
attatcgaggaagacaataaattcttgaaactcctcgagttattaggtatataccaagaa
ttaggaagcatcattgtatttgtagacaaacaagagaatgctgacatacttctcaaagaa
ctaatgagggccgcctataactgcttgagtttacacggaggcatcgatcagtttgatcga
gattctaccattatcgatttcaagtcagggaaagtgaagctgttgatcgcaacttctgta
gcagctagaggattggacgtcaaacatttgattttagttgtcaattacgattgccctaac
cactatgaagattacgttcacaggtgtggcagaactggaagggcaggaaataagggattt
gcttatacattcatcacccctgaacaatccaggtatgcgggggatcttataaaggctttc
gaattggcaaatgttcctgttcctgagaacttgaggacgttgtgggagacgtataaaacc
aaacaggagtccgaaggtaaaaaagttcacagtggaggcggtttcagtggtaaaggcttc
aaattcgatgaatcagaagcagctgctattaacgaaaagaagaaattccagaaagcagct
ttaggattggctgatagcgatgatgaagacttagaacatgacattgaccaacaaattgaa
agcatgtttgctaccaagagaaccgtgaaagaaattaaggctcctctaggactcatcaac
tcatcatctatgggtaattctaatactgcagttgacaagctggaattggccaaacgtctc
gcatccaagatcaaccttacaaaaaatacaattatggataccaagtttgccacacaacag
gctgcagaatccatcctaaagggtagcggatctcagcctccaatcacagcaaagactgtt
gctgagcaactggccgcgaaacttaatacgaagctcaattatcaaccaaaggatgatgat
gatcgaatggacgaagattccgagcaaaccttcagaaagtacgaggaagaattggaaatc
aatgattttcctcagcaggctaggtggagggtcacctcgaaggaagccttggctcagata
tcagaatattcagaagctggcatcactgttaggggtacttacgtccctactggcaagtca
cctcccgagggagaaagaaaattatatttagcaattgaaagtacatctgacatagcagtt
tctaaagcaaaagctgaaatcacgaggttaatcaaagaggaactactcaagttacaaacc
gcaggacatcatacatttaataaggctagatataaggtcgtgtaa
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