Leptinotarsa decemlineata (Colorado potato beetle): 111511258
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Entry
111511258 CDS
T07512
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ldc
Leptinotarsa decemlineata (Colorado potato beetle)
Pathway
ldc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ldc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111511258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ldc03019
]
111511258
03012 Translation factors [BR:
ldc03012
]
111511258
Enzymes [BR:
ldc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111511258
Messenger RNA biogenesis [BR:
ldc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
111511258
Translation factors [BR:
ldc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
111511258
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
OB_NTP_bind
HA2_N
DEAD
HA2_C
Cas3-like_C_2
ResIII
RVT_1
PfNDH2_hel_ins
Motif
Other DBs
NCBI-GeneID:
111511258
NCBI-ProteinID:
XP_023023039
LinkDB
All DBs
Position
Unknown
AA seq
800 aa
AA seq
DB search
MCVKYDNCQSQPYGNDNGVPQGSILGLLIISYVPEHVNTNQIILYADDTTCCRRGKTTQV
AQFILDDYIEKNKGSACKIVCTQPRRISAISVAERVAEERAEKLGESVGFQIRLEKKLPR
DTGSIVFCTTGVVLKQMESDPSLSTVSHIILDEIHERSIPSDFLITVLKEVIKKRNDLKI
ILMSATLNAEAFSKYYNNCPHINIPGFTYPVAEYFLEDVLQKTKSKLFQQFEPSTSRWDY
KKRVQKNRGPLSVEEQEFKEYIVPYARNLEREKKYDALVCEQLKNPDSEILNLDLVYELL
VYIVEKEEKHGSVLIFCPGLSQISGLIKKIENSSKFPPSRYIIFPLHSQMPSIDQKEIFN
PAPQGKRKIIVSTNIAETSITIDDVVYVIDCGKIKTADFDIELKTETLKIRWVSVANADQ
RRGRAGRVQPGVCFHLYSRARHMILEKYLKPEILCKRLEGTILTAKILQLGKIEEFFSKL
MVSPDAESLSIALALLKRLNALDSVENLTPLGYHLARLPVAPQMGKMILLGAIFSCLDPI
LSVAVSLDFKDAFQIPLGKEQEADKKRSELADDTMSDHIVLHKALETFEYESDPSRFCWE
YFLSPYTLKLLKKMKEQFMGYLKDLDFVSNLNPKNAENNQNSKNMSLVKAVICAGLYPNV
AILKVSKKGIIKPYMTSMQTGQSCKFHPKSVLSRTRSFSFPLVVYYKKMKSTCDFIYDAT
MVHPLPILFFGDRYIHSEANGKHIVSVNNMVRFTADSERTVSIIRDLRDRLFWFLEHKIT
HPGSVNWTSSSDELNVLKLV
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgtgaaatatgataactgtcaatcacaaccatacggtaacgataatggagtccct
cagggatccatcttgggacttctaatcattagttatgtgccagaacatgtaaatacaaac
caaataattctatatgcagacgacacaacatgctgcagaagaggcaaaacaacacaagtt
gctcagtttattttggatgattatatcgagaagaacaaagggtctgcctgtaaaatagta
tgtacgcaaccaagaaggataagtgctatatctgtggcagaacgggttgcagaagaacgg
gctgaaaaactaggagagagtgttggcttccaaattaggcttgaaaagaaattacccaga
gacactggatcgatagtattttgtacaacgggagttgttctcaaacaaatggaatctgat
ccctctttgagcacagtgtcccacatcatacttgatgaaattcatgaacgcagcattccc
tcagactttttgataactgttttgaaggaggttattaagaaaaggaacgatcttaagatc
attctaatgagtgcaacattaaatgcagaagctttttcgaaatattataataactgccct
cacatcaatattcctggattcacatatcctgtggcagaatactttttagaagatgtcttg
caaaaaactaaaagcaaattattccaacagtttgaaccttctacatcgaggtgggattac
aaaaagcgtgtgcaaaaaaataggggtccgctaagtgtagaagagcaagaattcaaagaa
tatatcgtgccgtatgccagaaacctggaaagagagaagaagtatgatgcacttgtgtgt
gaacagttgaaaaatccagatagcgaaatcctcaatttggatttagtttacgagttatta
gtctatatagttgagaaggaagagaaacacggatcggtactgattttctgtcccggatta
tcgcaaatatcgggcctcataaagaaaattgaaaactcttcaaagtttccaccttcccga
tacatcatatttccgttgcactcgcagatgccatctatagaccagaaagaaattttcaat
ccagctccgcaaggcaagagaaaaataattgtgtcaactaacatcgcagagacatccatt
acaatagacgatgtcgtgtacgtcattgactgtggcaaaatcaagactgctgatttcgac
atagaactgaaaacggaaactttgaaaataagatgggtgagcgttgctaatgcagatcag
agaagagggcgtgccggaagggtacagcctggagtgtgttttcatctgtatagcagggca
cggcatatgattttggaaaagtacctgaagcctgaaattctttgtaaaaggctcgaaggg
actattttaacagctaaaatcttacaacttggtaaaatcgaagaatttttttccaaattg
atggtcagcccagatgcggaatcattgagtattgcgctagccctcctcaaacgtttaaat
gctttggacagtgttgaaaatttaaccccgcttggttaccatttagccaggttgcccgtt
gctccacaaatgggaaaaatgatattgttgggagccatattcagttgcttggatcctata
ctatcggttgctgtgtctttggatttcaaggacgcatttcaaattccactcggaaaagag
caagaggctgacaagaaaaggtctgaacttgcagatgacaccatgagcgatcatattgtt
ttacataaggcattagaaacgtttgaatacgaaagtgatccgagccggttttgttgggaa
tattttttaagtccgtacaccctcaagctgctgaaaaaaatgaaggaacaatttatggga
tacttgaaggatttagattttgtttccaatctgaatccgaagaatgctgaaaacaaccag
aattctaaaaacatgagtttggttaaggctgtgatctgtgctgggctatatcccaatgtt
gcaatactaaaggtttctaaaaagggaataatcaagccgtacatgacttcaatgcaaaca
ggacaatcgtgcaaatttcatccaaaatcagttttgagccgtacgaggagtttttcattt
cctctagtggtgtactacaaaaaaatgaaatcgacgtgcgacttcatttacgacgccacg
atggtacatccattacccattttatttttcggtgatcggtacatccattccgaggcaaat
gggaagcacattgtcagtgtcaacaatatggttagatttacggcggactccgaaagaacg
gtctctatcatcagagatctgagggataggctgttctggttcttggaacacaagatcact
catcctggcagtgtcaattggacaagttcatctgatgaactgaatgtattaaagttagta
taa
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