Leptinotarsa decemlineata (Colorado potato beetle): 111511983
Help
Entry
111511983 CDS
T07512
Name
(RefSeq) exosome complex exonuclease RRP44
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
ldc
Leptinotarsa decemlineata (Colorado potato beetle)
Pathway
ldc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ldc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111511983
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ldc03019
]
111511983
Messenger RNA biogenesis [BR:
ldc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
111511983
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
OB_Dis3
PIN_4
Rrp44_CSD1
CSD2
Rrp44_S1
OB_RNB
OB_HELZ2
Motif
Other DBs
NCBI-GeneID:
111511983
NCBI-ProteinID:
XP_023023832
LinkDB
All DBs
Position
Unknown
AA seq
957 aa
AA seq
DB search
MFTTKAFIKKTRIGNFLKNVREHYIRDDIYCGIPVCSKCSFINSNLSRNHVNSCSLVNHN
HYLILDTNIILDQMDVLEEPVLGNVIILHTVLKEVKHRSLPIYKRLHSIIENPTRHFYVF
TNDHHKDTYIKQNDGELINDYNDRSIRKACAWYSSHVPEDKFIFLSDDVNNRTIAIEEGI
SSYSINDYVKHLENGTLLEDKLSRKDFHIDSNTKDVFPPHLTNTELLNGVKEGKLYQGTF
RASRDNFLEGFVNVEALDDAVLVQGRSGLNRAVDGDIVVVELFAEQDWISPSEIVLEDEG
VAEENIDEVEIKEQELKKSTHKKKGEIKPTGRVVGIIRRKWRQYCGILQGGMDGVFQLFI
PADKSIPKIRIETRQAEFLRTQKLIVAIDSWPRHSRYPHGHFVRALGKIGDQNTENEVVL
LEHDVPHSQFSEEVLSCLPKLPWIITEEDEKRRVDLRHIDICSVDPPGCTDIDDALHCRP
ITDNKLEVGVHIADVSHFIRPGTALDIEAASRATTVYLVNKRIDMVPELLSSNLCSLRGG
EERFAFSCIWEMDMKANILNTRFHKSIIRSKAAMTYEEAQIIIDDKSKTDSIAESLRYLN
MLAKILKKRRLEKGALVLASPEVKIQMDSETMEPLDVEVKKLFETNSMVEEFMLLANISV
AEKILEDFPECSMLRRHPTPPNSNFDPLVKAGKHLGFDIHTNSGKNLAKSLDEAVRIDNP
YFNTMLRILATRCMLQAVYFASGTLQKEEYFHYGLAVPLYTHFTSPIRRYADIIVHRLLA
VTCGSDSTYPDLLDKQKTSNLCQNLNYRNRMAQYAGRASVAFNTHLFFKGKLQDEEGYIL
YVRKNALQILIPKYGLECTLFLSQKGETSNIFEYNEEDQTQKAGNIILHTFDPVKVRLSL
NCDNVQHEKFVLMLVFPFIEGFSVPPLDELENMQTEDNEKKRKSRTEGNKKKSKRKV
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgttcactactaaagcatttattaagaagactagaataggaaactttttgaagaatgtg
agagaacattatattcgagatgacatatattgtggaattccagtatgttcaaaatgtagt
tttatcaattccaacttatctagaaatcatgttaatagttgttcacttgtgaaccataat
cattacttgatattggacaccaatattattctagatcagatggacgttctagaggagcct
gtacttggaaatgtaatcatactacatactgttttgaaagaagttaaacaccgcagtttg
ccaatttacaaacggctgcacagtatcatagaaaatcccactagacatttttatgtcttt
acaaatgatcaccacaaagatacgtacatcaaacaaaatgatggagaactgatcaatgat
tataatgaccggagtattagaaaagcatgtgcatggtattcgtcacatgttcccgaagat
aaattcatatttttgagtgatgatgtgaataatagaactatagctatagaagaaggaata
tcctcatactcaataaacgactatgtgaagcatttagaaaatggaacattgcttgaagat
aaactatcaagaaaagattttcacatagatagcaacaccaaagatgtttttcctcctcat
ttaaccaatactgaacttttgaatggagtaaaagaaggaaagctgtatcaaggcacattt
cgtgcatccagagataattttttagaaggctttgtgaatgttgaagcactggatgatgca
gttcttgttcaaggacggtcgggtttgaatcgcgccgttgatggtgatatagtggttgta
gaactgtttgcagagcaagattggatatcacccagtgaaatagttcttgaagatgaggga
gtggcagaagaaaatatcgatgaggtggaaataaaagaacaagaattaaaaaaatccacc
cacaaaaagaagggggagataaaacccactggtagagttgttggtataatcaggaggaaa
tggagacaatactgtggtatactacaaggtggtatggatggtgttttccaattatttata
cctgctgataaaagtattccaaaaataagaatagaaacaaggcaggccgaatttctaagg
acacaaaaacttatagtagctatcgattcgtggccaagacattctaggtatccccatggg
cactttgtaagagctctgggtaaaattggtgaccaaaatactgagaatgaagttgtgctg
ttggagcatgatgtacctcatagccagttttcagaagaggtcctcagctgtcttccaaaa
ttaccttggattattacagaagaggatgagaaacgacgtgtggacctcagacatattgac
atttgttcagttgatcctccaggatgtacagatattgatgatgcattgcattgtcgtcct
ataacagacaataaattggaagttggggtccatattgctgacgtatcacatttcattcgg
cctggcactgctctcgatattgaagctgcttctcgagccacaactgtatatttagtgaat
aaaagaatcgatatggtgccagaacttttgagttccaatttgtgttctctcaggggtgga
gaggagcgtttcgcattttcttgtatttgggagatggacatgaaggccaatattttgaat
accaggtttcacaaaagtataattagatctaaggcggccatgacatacgaagaggctcaa
atcattattgacgacaaaagcaagacagatagtatagcagaatctttaagatatctaaat
atgctggccaaaatactaaaaaaaaggcggttagaaaaaggggcattggttttggcatct
ccagaagtcaaaatccaaatggactctgaaaccatggaaccacttgatgtggaagtaaaa
aaattgtttgaaaccaattcaatggttgaagaattcatgttgttggcaaatattagtgtt
gccgagaagatactagaagattttcccgaatgttcgatgctcaggagacaccctactcca
cctaactctaattttgatccattagtgaaagctggaaaacatcttggcttcgacatacat
accaactctggcaaaaatcttgctaagtccttagatgaagctgttaggattgataatccg
tatttcaatacgatgctgcgaattcttgcaacacgatgcatgctccaagctgtctatttt
gccagtggcaccttgcagaaagaggaatacttccattacggcctggctgtgcctctttat
actcacttcacttcacccatcaggagatatgcagacattattgtacataggttattggca
gtgacttgcggatcagattctacttatcctgatttgcttgacaaacaaaaaactagtaat
ttgtgccagaatttgaattatcgaaatcgaatggcccagtatgcaggaagagcttctgtt
gccttcaatactcatcttttcttcaaaggaaaattgcaagacgaagaaggttatatcttg
tatgtaagaaaaaatgctcttcagattttaataccaaaatatggcttggaatgtacattg
tttttgtcacaaaaaggagaaacatctaatatctttgaatacaatgaagaggatcaaact
caaaaagctggcaacataattcttcacacatttgacccagtgaaagtgaggttgagtcta
aattgtgacaacgtccaacatgaaaagtttgttttgatgcttgtttttccatttatcgaa
ggattcagtgttccaccacttgatgaattggagaatatgcaaacagaagacaatgagaag
aaaagaaaatcacgcacagaaggcaataaaaagaagagtaagagaaaggtgtga
DBGET
integrated database retrieval system
