Leptinotarsa decemlineata (Colorado potato beetle): 111513286
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Entry
111513286 CDS
T07512
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
ldc
Leptinotarsa decemlineata (Colorado potato beetle)
Brite
KEGG Orthology (KO) [BR:
ldc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ldc03021
]
111513286
03036 Chromosome and associated proteins [BR:
ldc03036
]
111513286
Transcription machinery [BR:
ldc03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
111513286
Chromosome and associated proteins [BR:
ldc03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
111513286
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
Tex_central_region
S1
HHH_9
Tex_YqgF
HHH_3
Tex_N
S1_RRP5
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
111513286
NCBI-ProteinID:
XP_023025243
LinkDB
All DBs
Position
Unknown
AA seq
1807 aa
AA seq
DB search
MADFIDREAEESSEEEDLEPRDRKKAKKAKAVDSSDEEEEDDEDRLREELKDLIDDNPIE
ESDAESDASGSSRSQKRKKSDEEDLDDRLEDEDYDLLEENLGVKVVRRKFKRLRRFDDNE
SEGEEEQNADQDRDQIAMDIFSEDDDERRSERSHRAPEPEAFGDEEDEGEYSDADDFIVD
DEGRPIAEKKRKKKPIFSDAALQEAQETFGVDFDYDEFSKYDQDEYDESEEDEEDEYEED
DEGERRRRSKKAAKKKPTKKSIFEVYEPSELKRGFFTDLDNEIRNTDIPERMQLRDVPVT
SVPDDSSELDDEAEWIYKQAFCKPSVSNMDANLSPEARDKMKKGPQTIVKIRKALDFIRN
QQLEVPFIAFYRKEYVQPELNINDLWKVYRFDAKWCQLKTRKENMLRLFEKMRSYQLDIL
MKDPDAPIPDNVRVMKDSDIEQLKNVQTPEELNDVHNHFILYYAADLPAMHAAWRIKDKE
EKKRAKREARMKLIAESEEGADIPEEVEEVEDDEPEPETLKYANRSGSYSLCVKAGLDGL
TKKFGLTPEHFAENLRDNYQRHEVDQEHVEPLEIAKEFISPKFSTVEEVLQAAKYMVALQ
IAREPLVRKCVRETFYERAKMNVVPTKKGQKEIDESHNCYSMKYVKNKPVRDLTGDQFLK
LCLAEEEHLLTISINETIEGNTSGSYIDEVKQLYIKDEFSKNVQDWNALRMECVERALTK
SVFPDLKAELKRVLLSEAKECVLRACCRKLYNWIKIAPYTITFSEEDEDDWDTSKGIRTM
GLAYVPDYTVSAFACIAAPDGEITDYLRLPHMLKRKNSYRNEEKLLKESDLQAVKNFIYT
KKPHVIAIGGESREALMIAEDLRGVINELVESDQFPQIKVEIVDNELAQVYANSNKGQAD
FRDYPELLRQAVSVARKMQDPLVEYSQLFNADQEILSLRFSPLQESLPKEELLEALCLEF
VNRTNEVGVDVNLAVQQAHKSNLVQFICGLGPRKGQALLRVLKQTNQRLENRTQLVTSCH
MGPKVFINCSGFIKIDTSSLGDSTEAYVEILDGSRVHPETYEWARKMAVDALEYDDDEGA
NPAGALEEILEAPERLKDLDLDAFAEELERQGFGNKSITLYDIRAELNCRYKDLRQPFRS
ANPEELFDILTKQTPETFYIGKMVTASVIGIARRKPKPDQLDQANPVRNDETGLWQCPFC
LKNDFPELSDVWNHFDAGSCLGQATGVRLRLDNGVLGYIYIKNISDKPVSNPEERVKVGQ
LIHCRIQKIDVERFSVDCTSKSSDLLDKNHEWRPPRDPYYDQEQEDKDKGIEAERKKDLQ
RKTYVKRIIVHPAFHNISYAETEKCMANMDQGEVIIRPSSKGFDHLTITWKVADGIYQHI
DVKEEGKANPFSLGKSLLIGKEEFEDLDEIIARHITPMASYARDLLYFRYHKDFEGGQKD
KAEEYLIEEKKKNSSKIHYVISAAKNFPGKFLLSYLPRNKVIHEYVTVTPEGFRYRQQMF
DSLNSLFKWFKEHFRDPPPGGLTPGTPRSSGRTPYGSGTPSFNMNTEAIQRVAQNLPSHM
MQTLSAVANQTPHYPHTPGGAYGAANYINTPYTPSGQTPYMTPYQTPHTQQTPRYGHQTP
SQVSGAAPHLAGTFLHPSAVTPSQRTPSYRNLPVQSPMISQSPVPSPGSSQSSFSSSHSQ
HNRGNYGDRMRFQPPESPRSFASNNRVPYPDNPRFGSGGTESMDWQKAAEAWAARSRSTP
RSEGRNTPRSMGQRTPRYNDNIANDLERSRMKNVGKSPRSARSTPRTNTSPHSMSLGDAT
PLYDESI
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atggcagactttatagatagagaagctgaagagagcagtgaggaggaagacttagaacca
cgcgaccgcaagaaagcaaagaaagctaaagctgttgacagttctgacgaggaggaagaa
gatgatgaagaccgtttacgtgaagaactaaaagatcttattgatgacaatcccattgaa
gagagtgatgcggaatctgatgcatctggtagtagtagaagtcaaaagcgaaagaaatca
gatgaagaagatttagacgatcgtttggaagatgaagattatgacttacttgaagagaat
ttgggtgtcaaagttgtgagacgtaaattcaaacgtctacgtcgttttgatgataatgag
agtgaaggagaagaggaacaaaatgctgatcaagatcgagatcaaattgccatggatata
ttctcagaagatgatgatgaacgaagatcggagcgtagccatagggcccctgaacctgaa
gcatttggagatgaagaagatgaaggagaatactctgatgccgacgacttcattgtggac
gatgagggtaggcctatagccgagaagaaaaggaaaaaaaagcccattttcagcgatgcg
gctcttcaagaagcccaggaaacttttggtgttgactttgattatgatgaattttccaaa
tatgaccaagatgagtatgatgagtctgaagaagatgaggaagacgagtatgaggaagac
gacgaaggagaaagaaggaggagatctaagaaagctgctaagaagaagcctactaaaaaa
tcaatattcgaagtctacgaacctagtgaactcaaaaggggcttctttactgaccttgac
aatgaaatccgaaacacggatattccagaaagaatgcaactacgagacgtcccagttacg
tctgttcctgacgactcttctgaactcgacgatgaggccgaatggatctacaaacaagcg
ttttgtaaaccgtcagtgtctaatatggacgcgaacttatctcctgaagctcgagataaa
atgaaaaaagggccgcaaacaatcgtcaagatcaggaaggcgttggatttcatcagaaat
cagcagctggaagttccttttatcgctttctacaggaaggagtatgttcaaccggaactg
aatatcaatgatctttggaaagtttatagatttgatgcaaagtggtgtcaactgaaaaca
cgtaaagaaaacatgctgagactattcgagaaaatgagatcatatcagttggacatacta
atgaaagatcccgacgctcccatacctgataacgtgcgagttatgaaagattcagatata
gagcagttgaagaatgtgcagacccctgaagaactcaatgacgtgcacaatcatttcatt
ctttattatgctgccgacttgcctgccatgcatgcggcttggaggatcaaggataaagaa
gagaaaaaacgggccaaaagggaagccaggatgaagctcattgctgaaagcgaggaagga
gcagacattcctgaagaggtagaagaagttgaggatgatgagccggaacctgagactttg
aagtatgcaaatagatctggcagttactcactgtgtgtaaaggcgggattggacggttta
acgaagaaatttggtttaacacctgaacattttgcggaaaatctgcgagacaattatcag
aggcacgaagtagatcaagaacacgtggaaccgcttgaaattgcgaaagaattcatatct
cccaaattctcgacagttgaagaagtcctccaagcggccaagtatatggttgctctgcaa
attgctagagagcctttggttcgaaagtgtgtgagagaaactttttacgaaagggcaaaa
atgaatgtcgtaccaactaagaaaggtcagaaggaaattgacgagtcccacaactgttac
agcatgaaatatgtcaagaacaaacctgttagagacttgaccggcgatcagttcctgaaa
ctttgccttgcagaagaagaacatctgctgaccatttccataaatgaaacgattgaaggt
aataccagtggatcatacattgatgaagttaagcaactgtatatcaaggacgaattcagc
aagaacgtacaagattggaatgctctcagaatggaatgtgtagagagagctttaacaaaa
agtgttttcccagatttgaaagcagaactaaagagagtgctgctatccgaagcgaaggaa
tgtgtactgagagcttgttgtagaaaattatacaattggataaagattgctccatacaca
ataacattttccgaagaagacgaggatgactgggacacttccaaaggaatcagaactatg
ggccttgcctatgttccggattataccgtgtcagctttcgcttgtattgctgctccagac
ggagaaataaccgattatttgaggctcccccatatgctaaaaaggaaaaatagttacagg
aatgaagagaagttgctgaaggagtccgacttgcaagcagttaagaactttatctacacc
aaaaaacctcacgtgatcgccatcggcggagaatctagggaggcactgatgatcgccgag
gacctccgtggggttataaatgagttggtggaatcagaccagttcccccagataaaggtt
gagattgtggacaatgagctggcgcaggtgtatgccaactctaataagggacaagcagat
ttcagagactacccagaacttctgaggcaggctgtatcagtggccaggaaaatgcaagat
cctctcgttgagtactcccagcttttcaatgcggatcaggaaattttaagtttaaggttc
agtccactacaggaatctctcccaaaagaagaattgctcgaagctttatgtttggaattt
gtcaacagaacaaacgaagtgggcgtagatgtcaatctggccgttcaacaagcccacaaa
agtaatctggttcaattcatctgcggtctcggaccgcgtaaaggccaagctttattgcga
gttttgaaacaaaccaatcagcgactggaaaatagaacgcagcttgttacatcgtgccac
atgggtccgaaggttttcataaactgttcaggattcataaagatagacacgagtagtttg
ggagacagtacggaggcttacgtggaaatactggatgggtctcgcgttcatccagaaaca
tacgaatgggccaggaaaatggcagtggacgccttagaatatgatgatgatgagggagcg
aaccccgccggagccttggaggagatccttgaggcgcctgaaaggttaaaagatttggat
cttgatgcttttgcagaggagttagagaggcaagggtttggtaataagagcatcaccctg
tatgacataagggcggaattgaactgcagatacaaagatttgaggcaaccgtttcgttca
gctaatcctgaggagttgttcgatatactcacgaagcagactcccgaaactttctatata
ggtaaaatggtcacggcttcagttatcggtatcgctagaagaaaacccaaaccggatcaa
ctagatcaagcgaatcctgtcagaaatgatgaaactggcctctggcaatgtcctttctgt
ttgaagaatgattttcctgagttgtctgatgtgtggaatcattttgatgctggctcttgt
ctaggacaagcgactggtgtaaggttaaggcttgataacggtgtattaggttatatttat
ataaaaaatatcagtgacaaaccagtatcgaatcccgaagaaagagttaaagtaggccaa
ctcattcattgcagaatacaaaagattgatgtagaacggttcagcgttgactgtacttca
aaatccagtgatcttttggataaaaaccatgaatggaggccccctcgagatccttattac
gatcaagaacaagaagataaagacaaaggcatagaagcggagagaaaaaaagacttacaa
cgtaaaacgtacgtgaagcgaatcatagttcatcccgccttccacaatatttcctatgct
gaaacagaaaaatgcatggccaatatggatcaaggggaagtcattataaggccttcaagt
aaaggcttcgaccatttgacaataacgtggaaagtggcagatggtatttaccagcatatc
gatgtcaaggaagagggtaaagcaaatccattttcattgggaaaatcactgttgattggt
aaggaggagtttgaagatttggatgaaataatagccaggcacatcactccaatggcttca
tacgcaagggacttgctttactttaggtatcacaaagactttgaaggtgggcaaaaagat
aaagcggaggagtacttgatcgaggagaagaagaaaaattcttctaaaattcactatgtc
atcagcgctgctaaaaacttccctggcaaatttttgctctcttatctcccacgaaacaaa
gtcattcacgaatatgtaacggtaactccagagggattccgatacagacagcaaatgttt
gactcgctaaattctctgttcaaatggttcaaagaacacttcagggatccacctcccgga
ggacttactccaggtactccgcggtcttctggtcgcacgccatatggtagcggaactcca
tcatttaatatgaatactgaagcaattcaacgagttgctcaaaatcttccgagccacatg
atgcaaactttgtcggctgtagccaaccaaactcctcattatcctcacactcctggggga
gcctacggtgctgccaattatatcaatacaccttacactccgagcgggcagactccgtac
atgaccccataccaaaccccccatacccagcagacgcctcggtatggccaccaaacccct
tctcaggtatcaggcgcagcccctcacctagcaggaactttcttacaccctagcgcggtg
acgccttcacagcgtacgcccagctacagaaacctaccagtacaatctccgatgatttcg
cagagtccagtgcctagtccgggatcatcgcaaagctctttcagcagcagtcacagccag
cataatcgaggaaattacggggataggatgcggttccagcctccggagtctccgaggagt
tttgccagtaataatagagttccttatcctgataacccaagattcgggtcaggaggaacc
gaatcgatggactggcagaaggcggctgaagcttgggctgcgaggtccagatccacacca
agaagcgagggtcgaaatactccacgatctatgggtcagaggactccgagatataatgat
aacattgccaacgatctggagcgctccaggatgaaaaatgttggcaaaagccccaggtcg
gccagatccactcctcggacaaacacttctcctcattctatgtcgttgggtgacgccact
cctctttatgatgaaagtatctaa
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integrated database retrieval system
