Leptinotarsa decemlineata (Colorado potato beetle): 111513878
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Entry
111513878 CDS
T07512
Name
(RefSeq) CCR4-NOT transcription complex subunit 10
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
ldc
Leptinotarsa decemlineata (Colorado potato beetle)
Pathway
ldc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ldc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111513878
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ldc03019
]
111513878
Messenger RNA biogenesis [BR:
ldc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111513878
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_10
TPR_12
TPR_2
TPR_1
TPR_14
TPR_16
TPR_MalT
Motif
Other DBs
NCBI-GeneID:
111513878
NCBI-ProteinID:
XP_023025866
LinkDB
All DBs
Position
Unknown
AA seq
664 aa
AA seq
DB search
MAEKEQEKGPEIVSDQEKEIAQNALEEFKKKNYSACLQLLNKLESRSNDLKVVHNKAIVE
YCKSDLKKTEQLQKSLTSICNQFQVKVDKLDDIDHCIIQYNQAVILYHQRQYTAAQRIMD
RVYKFIEPMDEYLAKQVSLLAIEIQLSLRQPDKALTLISYLENNLIYGGSIPLKGLDKNG
KERKITLPPPKPLSEEFEKKLLKYKIRCYLMNHSLSISSKEVQVLLKDKSNIDAMYLAAN
TEYLKGNYMDAVKILTSIPSECLCYSDCGESSTLMFYNNMGVLHHAMGKPNLACYYFQTA
LKGDISNSQSGSKKDDNEKPLYTLGSSKYHELMYNLGIALLHAGRPTQAFECLIVAVRRY
HRNSRLWMRLAECCVMVHKETNEIDFEKQKNLIAEVVGSKEKQKIILVSNLSKDKKYSTE
SQSYAVPVPSLEFALLCLRNATLLIPSDTATPPVPLFLIPGVTPPAPPPSPSLSPSNPLS
LDGIAVLRNSILVTSAYVSLCLGDYIMSLEHAKELLEQPRISSIHKLLAHLYAAESLVLL
DKISEALEHLNPESIKDISFELPEDKEKPENITLKTNPPAKWFPNTLQSAQAVMQYNIAV
AKTIRGQLDQAATMLRQIWQQKSATCQVPTHIIMLFIYIELQLGHTDVAKNLLRQYHQQQ
RISG
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaaggaacaagaaaaaggaccagaaattgtgtctgaccaagaaaaggaaatc
gcacaaaatgctctagaggaatttaagaaaaaaaactatagtgcctgcttacaactgctg
aacaagttggaaagcaggagcaacgatttgaaagttgtacacaataaagcaattgtcgag
tattgtaagagcgacctgaagaaaacggagcaattacagaagtctctcacctcaatttgt
aatcagtttcaagtaaaagttgacaaattggatgatattgaccactgcattatacaatac
aaccaagctgtaatactctatcaccagagacaatatacagccgcccaaagaattatggat
agagtatataagttcatcgagccgatggacgaatatctggcaaagcaggtcagtctctta
gctatagaaatacaactcagccttcgacaacctgacaaagctttaaccctcataagttat
ttggagaataacttgatctatggaggttccattcctctaaaaggtttggataaaaatgga
aaggagagaaagataacacttccccctccaaaacctttgtctgaagaatttgaaaaaaaa
ctattgaaatataagatcagatgctatttgatgaatcattcattaagtatttcctccaaa
gaagttcaggtgttgctcaaagataaatcgaatattgacgcaatgtaccttgcagccaat
accgaatatctgaaagggaactatatggatgccgtgaaaattttgacgtcaataccaagc
gaatgtttatgttacagcgattgtggtgagtcttcgacactgatgttttacaacaacatg
ggcgtcttacaccacgcgatgggaaaaccgaatttggcctgttattatttccaaacggcc
ctcaaaggagatatcagtaattcgcaaagtggttcaaaaaaggacgacaatgagaaacct
ttatatactttaggaagctcgaaatatcatgaattgatgtacaaccttggaatcgctctg
ttacatgctggacgaccaactcaagcattcgaatgtctcattgttgcagtgagacgatat
cacaggaattcaaggttatggatgaggttggcggagtgctgcgtaatggtacacaaggag
acaaatgaaattgatttcgagaaacaaaagaatctgattgccgaagttgtggggagcaaa
gagaaacaaaagattattttggtatctaatttatcaaaagacaagaagtacagcactgag
agccaatcttatgccgtcccagtgccttctttagagttcgctttactctgtttgaggaac
gccactctcctcataccctcggacaccgctactcctccagttcctttgtttttgattccc
ggggtcaccccaccggcgccccctcctagccctagtttgtctccctcgaatcctctttcg
ctggacggtatcgctgtgttgaggaacagcatattagtaacaagtgcctacgtttcgtta
tgtcttggggattacattatgtcgttggagcatgccaaggaacttttggaacaaccgagg
atatcgagcattcataaactgttggcacatttgtacgccgctgaatctctggtactactt
gataaaatatcagaagccttggaacacctcaatccagaaagtattaaagatatatccttc
gaacttccagaagacaaagagaaacctgaaaatattacattgaaaactaacccaccggca
aaatggtttcccaatacccttcaaagtgcccaagcagtgatgcagtacaacatagcagtg
gcgaaaacaatacggggtcaactagatcaggcggctactatgctcaggcaaatctggcaa
caaaaaagtgcaacgtgccaagttcccactcacattatcatgttgttcatttatatagaa
cttcagcttggacataccgatgttgcaaaaaatctattgaggcagtaccatcagcaacag
aggataagtggatga
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