Leptinotarsa decemlineata (Colorado potato beetle): 111513941
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Entry
111513941 CDS
T07512
Name
(RefSeq) paired amphipathic helix protein Sin3b
KO
K11644
paired amphipathic helix protein Sin3a
Organism
ldc
Leptinotarsa decemlineata (Colorado potato beetle)
Pathway
ldc04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ldc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
111513941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ldc03036
]
111513941
Chromosome and associated proteins [BR:
ldc03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
111513941
REST complex
111513941
Heterochromatin formation proteins
Other heterochromatin formation proteins
111513941
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Tricorn_C1
Motif
Other DBs
NCBI-GeneID:
111513941
NCBI-ProteinID:
XP_023025930
LinkDB
All DBs
Position
Unknown
AA seq
1343 aa
AA seq
DB search
MKRLRVDETGKESSINEPSVLSGVSTLYRQQQQSLPNVAPALSYSTAPPGTVKVVSEGMQ
SGLYAPPPPVSYAAIATTAPSPQALKPQAMPPPGGGATVLQGGGTAALQESPPGSQRLKV
EDALSYLDLVKYKFGSKPQVYNDFLDIMKEFKSQSIDTPGVIQRVSNLFKGFPELIVGFN
TFLPPGYKIEVQRNDQGYAFQVSVSMPSPTTGAMPQEHRSAMILKGSGTISVSAPSPAAP
PAAPPPPVAPQVPPPQPPPPPPVVHHSPSTYGGNAPSYAALSLSAAQAAVTHALGGHTET
PQNQPVEFNHAINYVNKIKNRFQGQPEKYKKFLEILHTYQKEQRTLKENSSIGSSGMKHL
TEQEVYSQVAKLFENQSDLLAEFGQFLPDATSHINQAPISEHVNSVKKTPVKPYHRGDPI
ERHSVSSHKPSHVTSGGVKRSPTYSNYQHSKDAPPPKKHKMSSTCRDVTLSEAGKYGTLN
DYAFFDKVRKALRSQDAYNNFLRCLTLFNQEIVSKSELIQISTPFIGKFPELLRWFREFL
GQNNETTTEAVPFNVARNERPQGDHALEIDLATAKRLGASYCIIPKAQEGMKCSGRTQLC
KEVLNDQWVSFPTWSEDSTFVSSRKTQYEEYMYRCEDERFELDVVIEVNASTIRVLEGVN
KKLSRMSQDDASKYKLDDCLGGSSPTLHQRAIRRIYGDKAQDIIDGLKRNPAVAVPVVLR
RLKTKEEEWREAQKGFNKIWREQNEKYYLKSLDHQGINFKQTDVKALRSKSLFNEIETIF
DERHEQNDEGTEPVIGPHLVLFYRDRTILDDAANLLIHHVKRQTGIQKGEKRRIKNLLRQ
FLPDLFFHPRQQLSDDEREEDDEKDESEESPNSSPKSDKDNKGKDSSNHGKSPGRCEVSL
DEIKQEIEIKDEEHKVPLHAQTSDPEEVYTLFMANNNWYIFLRLHAILCDRLAKIYERAV
GMAAEEAKFRSCRKESTAVALRLKPKPQIEIEDYYPAFLDMVKNLLDGNMEGNTYEDTLR
EMFGIHAYVAFTLDKVVSYAVRQLQHCVTERTAIACSELFAKEQKRGAAGGPCITAQKRA
HMEMAYQRAGEKAVQEENCFKIYIYKRDCRMTIELLDTEPEDGKKVDDAKKWSVYKECYT
DITSSDRKPRSPVYLNRNLRLYKRRAENNYNRNKRVVRNHQLGNMDDGGGNENFQTLQDA
IERKLNERGPPERNVTDHPGYEVNDETQCKFNMQDSKIMFAVTKDSYLYNISAFHRARKS
HPQVTKQKATRFRQWLKRWACDHVSDTQSKQCTDWLMGRCDGVVPNRTRVLTDNDLSRTP
YVPYNRYRVERLLDDSADEDSPS
NT seq
4032 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtctgcgagtggatgagaccggtaaagaatcgagcatcaacgagccgtcagtc
ctgtccggcgtttccaccctctaccggcagcagcaacagtccctgcccaacgtggctccg
gcgttgtcctactcgaccgccccgcccggcaccgtaaaagtcgtcagcgaaggcatgcag
tcgggcctgtatgccccgccgccgcccgtcagctacgcggccattgcgacgaccgccccc
tccccgcaagcgctcaagccccaggcgatgcctccccctggtggcggcgctaccgtcctt
caaggcggaggcacagccgcccttcaagaatctccgccgggtagccagcgtctgaaagtc
gaggacgcgctatcctatctcgacctcgtcaagtacaagttcggctcgaagccgcaggtc
tacaacgacttcctggacatcatgaaggagttcaagagccagagcatcgacacgccgggc
gttatccaacgcgtctcgaaccttttcaagggtttccctgagctcatcgtcggctttaac
acgttcctgccgcccggctacaagatcgaggtgcagcgtaacgatcagggctatgccttc
caagtgtcggttagcatgccgagcccgacgacgggggcgatgccgcaggagcaccgttcc
gcgatgattctcaagggctcgggcacgatcagcgtgtcggcgccctcgcctgcggctcct
ccagccgcgccaccgccgcccgtcgcgccgcaagtgccgcctccgcaaccgccacccccg
ccgcccgtggttcaccactcgccttcgacgtacggaggcaacgcgccatcgtacgccgcg
ctctcgctgagcgcggcacaggcagcggttacgcacgcgcttggcgggcacaccgagacg
ccgcagaaccagcccgtcgaattcaatcacgccatcaactacgtcaacaagattaagaac
cgtttccaaggccaaccggagaagtacaaaaagttcctcgagattttgcacacctaccag
aaagagcagcgtacccttaaggaaaattcttcaatcggctcgagcggcatgaagcacctc
accgaacaagaggtgtacagtcaggtagcaaagctcttcgaaaaccagagcgacctgctc
gcagaattcgggcagtttttgcccgacgccacgagtcacatcaatcaagcgccgatttcg
gagcacgtcaactcggtgaagaagacgcccgtcaagccttatcatcgcggagaccctata
gaaaggcatagcgtttcttctcacaagcccagccatgttaccagcggtggtgtcaaaaga
tcgccgacttactccaactaccagcatagcaaggacgccccgccccccaagaagcacaaa
atgtcctcgacttgtcgagacgttacccttagtgaagctggcaaatatggaacacttaat
gattatgcattctttgataaggtccgcaaagccctccggagccaggacgcctacaacaac
ttcttgcgctgcctgacgcttttcaaccaggagatcgtctcgaaatcagagctgatccag
attagtactccattcatcggcaagtttcctgagctactgcgctggttccgcgagttcctc
ggtcagaacaacgagacgacgacagaggcggtgccgtttaacgtagcacgcaatgagcgc
cctcagggcgaccacgctctagagatcgacctcgcgaccgccaaacggctcggagctagc
tactgcatcatcccgaaagctcaggaagggatgaagtgctcgggcaggacgcagctctgc
aaggaggtgctcaacgaccagtgggtgtcattcccgacgtggtcagaggatagcacattc
gttagttcacgcaagacccagtacgaggagtacatgtatcggtgcgaggacgaacgcttc
gaactggacgtcgtgatcgaagtgaacgcgtcgacgatccgcgtgctcgaaggcgtcaac
aagaagctgagtcgcatgagccaagacgacgcttcgaagtacaagctcgacgactgcctc
ggcggctcatcgccgacgctgcaccagcgcgccatccgcaggatatacggcgacaaggcg
caggacatcatcgacggcctcaagaggaatccggccgtcgcggtgccggtcgttctgcga
cgcctcaagaccaaagaggaagagtggcgcgaggcgcagaagggtttcaacaagatctgg
agggagcagaacgagaagtactacctgaagagcttggatcaccagggtatcaacttcaag
cagaccgacgtgaaggcgttgcggtcaaagagtctgttcaatgagattgagaccattttc
gatgagaggcacgaacagaacgatgagggaacggaacccgtcatcggaccgcacttggtg
ctgttctatagggaccggacaatcctcgacgacgcagctaacctcctcatccaccacgtt
aagcgtcaaacgggcatacagaagggtgagaagagacgcatcaagaatttgctgaggcag
ttcctaccggatctattcttccatccgaggcagcagctgagtgatgatgaacgagaggaa
gatgacgagaaggacgagagcgaagagagtcccaacagttcgccaaaatccgataaggac
aacaaagggaaagacagttcaaatcatggaaagtcaccaggtagatgtgaagtaagcctg
gacgaaataaaacaagaaatcgaaatcaaggacgaggaacacaaggtgccgctacatgca
caaacatcagatccagaggaggtgtacacgctgttcatggccaacaacaactggtacata
ttcctgaggctgcacgccatcctttgcgatcgtctcgcaaagatctacgagcgggctgtc
gggatggctgccgaagaggcgaagtttcggtcgtgccgcaaagagagcaccgccgtcgcg
ctcagactgaagccgaagccgcagatcgagatcgaagactactaccccgccttcctcgac
atggtcaagaacctcctggacggcaacatggaggggaacacgtacgaggacacgctgcga
gagatgtttgggatacatgcgtacgtagctttcacgctggacaaggtggtatcttacgcg
gtgcgccaacttcagcactgcgtcactgagaggacggccatagcttgttcggagctgttt
gctaaggagcagaagcgaggagctgccggggggccttgcatcactgctcagaagagggcc
cacatggagatggcgtaccagcgagccggcgaaaaggcggtccaggaggagaactgcttt
aagatctacatctacaagcgcgattgccgaatgacgatcgagctgctggacactgagcct
gaggacggcaagaaggtagacgatgctaagaagtggagtgtgtacaaggagtgctatacg
gacattacgagttcggatcgtaagccgagatcccctgtttatctcaacaggaatttgaga
ttgtataagaggcgcgcagaaaacaactacaacagaaacaaaagggtggtaaggaaccac
caactaggaaacatggacgacgggggaggaaacgaaaacttccagactctacaggacgcg
atcgagcgtaaactgaacgaaagggggccccccgagaggaatgtgacggatcacccgggt
tacgaggtgaatgacgagacgcagtgcaaatttaacatgcaggactcgaaaataatgttc
gcagtgacgaaagacagttatctatacaatatcagtgccttccacagagctagaaagtcc
catccgcaagtgacgaagcagaaagccactcggttccggcagtggctgaaacgttgggcg
tgcgatcacgttagtgacactcaatcgaaacagtgcacagactggttgatgggtaggtgc
gacggcgtcgtgccgaacaggacgcgcgtcctgacggacaatgacctctcgaggactccg
tacgttccgtacaacaggtatcgcgtcgaaaggctgctggacgacagcgctgacgaagat
tcgccctcgtga
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