Leptinotarsa decemlineata (Colorado potato beetle): 111514624
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Entry
111514624 CDS
T07512
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
ldc
Leptinotarsa decemlineata (Colorado potato beetle)
Pathway
ldc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ldc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111514624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ldc03041
]
111514624
Spliceosome [BR:
ldc03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
111514624
Complex C
U5 SnRNP specific factors
111514624
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
111514624
NCBI-ProteinID:
XP_023026646
LinkDB
All DBs
Position
Unknown
AA seq
2367 aa
AA seq
DB search
MSLPPYILGPNPWATMMAQQHLAAAHAQAQAAAAQAHAHALQQQIPPPHPKSDVMTEDKL
QEKAQKWHQLQSKRFADKRKLGFVEAQKEDMPPEHIRKIIRDHGDMSSRKYRHDKRVYLG
ALKYMPHAVMKLLENMPMPWEQIRDVKVLYHITGAITFVNEIPWVIEPVYIAQWGTMWIM
MRREKRDRRHFKRMRFPPFDDEEPPLDYADNVLDVEPLEAIQIELDAEEDSAIAKWFYDH
KPLVGSKYVNGPTYRKWNLALPMMATLYRLANQLLTDLVDENYFYLFDTKSFFTAKALNM
AIPGGPKFEPLIKDMNPADEDWNEFNDINKIIIRQPIRTEYRIAFPYLYNNMPHFVHLSW
YHTPNVVYIKTEDPDLPAFYFDPLINPISHRHAVKSLEPLPDDDEEFILPETVHPFMQET
PLYTDNTANGIALLWAPRPFNMRSGRCRRAIDVPLVKSWYMEHCPPGQPVKVRVSYQKLL
KYYVLNALKHRPPKPQKKRYLFRSFKSTKFFQTTTLDWVEAGLQVCRQGYNMLNLLIHRK
NLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLIIDSHVQYRLNNVDA
FQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGIWA
PGWRVWLFFMRGITPLLERWLGNLLSRQFEGRHSKGVAKTVTKQRVESHFDLELRASVMH
DIVDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPIPIENMILRYVKMKADWWT
NTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYISPEEAVAIYT
TTVHWLESRRFAPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREELGLIEQAY
DNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLIPVYDVEPLEKITDAYLDQYLWYEAD
KRRLFPPWIKPADSEPPPLLVYKWCQGINNLQDVWDVNEGECNVLLESKFEKLYEKIDLT
LLNRLLRLIVDHNIADYMTAKNNVFINYKDMNHTNSYGIIRGLQFASFVTQYYGLVLDLL
VLGLQRASEMAGPPQMPNDFLTFQDVQSETCHPIRLYCRYVDRIHMFFRFSAEEAKDLIQ
RYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPRSVTTIQWE
SSFVSVYSKDNPNLLFNMSGFECRILPKCRTQHDEFTHRDGVWNLQHEGSKERTAQCFLR
VDDESLSRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQELLDLLVKC
ENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWSKQTDVGIT
HFRSGISHDEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEANAQNNRLTLEDLEDS
WDRGIPRINTLFQRDRHTLAYDKGWRIRTEFKQYQVLKQNPFWWTHQRHDGKLWNLNNYR
TDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPN
RRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKVHESIVM
DLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADVLLFSAYKWNVSRPSLLADTKDT
MDNTTTQKYWIDVQLRWGDYDSHDVERYARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNL
HSAYGNWFPGCKPLIQQAMAKIMKANPALYVLRERIRKALQLYSSEPTEPYLSSQNYGEL
FSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQK
RLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQL
PFQACLKIEKFGDLILKATEPQMVLFNLYDDWLKSISSYTAFSRLILILRALHVNTERTK
VILKPDKTTITEPHHIWPTLSDDEWIKVEVQLKDLILADYGKKNNVNVASLTQSEIRDII
LGMEISAPSAQRQQIAEIEKQTKEQSQLTATTTRTVNKHGDEIITSTTSNYETATFSSKT
EWRVRAISATNLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFVTISDLRAQICAFLYGV
SPPDNPQVKELRCLVLPPQWGTHQTVHVPNMPPKHQFLEDMEPLGWIHTQPNELPQLSPQ
DITTHAKLMSDNPAWDGEKTVIITCSFTPGSCSLTAYKLTPSGYEWGRQNTDKGNNPKGY
LPSHYEKVQMLLSDRFLGFFMAPSQGSWNYNFMGVRHDPSMNYDLKLANPKEFYHEVHRP
AHFLNFSSLEDGDGAGADGEDAFAYIQ
NT seq
7104 nt
NT seq
+upstream
nt +downstream
nt
atgtctttacctccatatatattggggccaaacccctgggccacaatgatggcccaacaa
cacctggcggcggctcatgctcaagcacaagcagccgctgctcaggctcatgcacacgct
ttgcaacagcaaataccaccaccacatccaaagtctgatgttatgactgaagacaaacta
caagaaaaagcccaaaaatggcatcaacttcaatcaaaaaggtttgcggacaaaagaaag
ttgggatttgttgaagcacagaaggaagacatgcccccagaacacataaggaagattata
agagatcacggagatatgagtagtcgcaaatacagacatgataagcgagtctatctaggg
gctctaaaatacatgccacatgctgtaatgaaactacttgagaatatgcctatgccatgg
gagcaaattagagatgttaaagttttataccatattactggtgccattacctttgtcaat
gaaataccttgggttattgaaccagtgtacattgcgcaatggggaaccatgtggattatg
atgagaagggaaaagagagatcgtagacatttcaagagaatgcgttttcctccttttgat
gatgaagaacccccgctcgactatgctgataacgttttagatgtcgagccacttgaggct
attcaaattgaactggatgcagaagaagattctgctattgcaaaatggttttatgatcat
aaacctctagtagggtcgaagtatgtaaacggacccacttatagaaaatggaaccttgct
cttccaatgatggccactttatatcgtttagctaaccagttgctgacagatcttgttgat
gaaaattatttttatttatttgacacaaagagcttttttacagcaaaggcattgaatatg
gctattcctggaggtcctaaatttgaaccactaataaaagacatgaatcctgcggatgaa
gactggaatgaatttaatgatatcaacaaaatcattataaggcagcctattcgtacggag
tacaggatagctttcccatatttgtacaataatatgccccattttgttcatctatcttgg
tatcatactccaaatgtggtttacataaaaactgaagatcccgatttacctgctttttac
tttgatcctttaattaatcctatttcgcaccgtcatgcagttaagagcttggaacctcta
cccgatgatgatgaggaatttattcttcctgagactgtccatccatttatgcaagaaact
cccttgtatactgataacacagctaatggaatagctctcttgtgggctcctcgaccattc
aacatgagatcgggtcggtgcagaagggccatcgatgtccctcttgtcaaatcctggtac
atggaacactgtccaccaggtcaacctgttaaagtgagagtcagctaccaaaaactgctc
aagtattacgtgctgaatgccctcaaacaccgtccacccaaaccacagaagaagaggtac
ttgtttagatctttcaagtcgacaaagtttttccagaccaccaccctagattgggtggaa
gctggcttgcaggtttgtagacagggttacaatatgcttaacctgctgattcacaggaag
aatctcaattacctccatttagattacaattttaatttgaaaccagtgaagaccctgacc
acaaaggagagaaagaagtctagattcggaaatgctttccacttatgtagggagatattg
cgcttgaccaaactgataatagattcccacgtacagtatagattaaacaatgtggatgcc
tttcaattggctgatggattgcagtacattttcgctcatgtaggacaattgacaggaatg
tacagatacaaatataaactcatgagacaaatacgtatgtgcaaggacttgaagcatctg
atatattacagattcaatacgggtccagttggaaaaggaccgggttgtggaatttgggct
ccaggttggagagtatggctgttctttatgagaggaattactcctctcctggaaagatgg
ttgggtaacttgctctcacgtcagttcgaagggcgtcattcgaagggtgttgctaaaaca
gttaccaaacagagagtagagtcacactttgatcttgaactgagagcatctgtcatgcac
gatatcgttgatatgatgccagaaggaattaaacaaaacaaggcgagaacaattctacaa
catttgtcagaagcgtggcgatgctggaaagctaacatcccctggaaagttccagggttg
ccaatacccattgaaaacatgattcttagatatgtcaagatgaaagccgattggtggaca
aatacagcccattataatcgagagcggatacgcaggggagcaacggttgacaaaactgtt
tgcaaaaagaatcttggtcgactgaccaggctgtatctcaaagctgaacaggaacgacag
cacaattacttgaaagacggaccctatatttctcctgaagaagctgtggctatttataca
acaacagttcactggctagagtcgagaagatttgcaccaatcccgttccctccactatca
tacaagcatgacacaaaattattaatcctggctcttgaaaggttgaaggaggcctatagt
gttaagtctcgactaaatcagagccagagagaggagttaggactcatagagcaggcttac
gataatcctcacgaggctctctctagaatcaagcgtcatttgctaacacaaagggctttc
aaagaagttggtatagaatttatggatctttacagtcatctcatacctgtatatgatgtg
gaacctttggaaaaaatcactgatgcttatttggatcagtacctctggtatgaagcagac
aagagaagactgtttcctccatggatcaaacctgcagattctgagccgcctccgctatta
gtgtataagtggtgccagggcataaacaacctccaagatgtttgggatgtcaatgaagga
gagtgtaatgtcctattagaatccaaatttgagaaactttacgaaaagatagatttgact
ttgttgaacaggctgctgcgtctgattgtcgaccacaacattgccgattacatgacagcc
aagaacaatgtttttatcaactataaagatatgaaccacaccaacagttatggtatcatt
cgtgggttgcaattcgcatcatttgttactcaatattatggacttgttttggatttgttg
gtacttggcttgcagagagccagtgagatggcaggaccaccacaaatgccaaacgatttt
ttgacattccaagatgtgcaatcagagacttgtcatccgatcagactgtattgtagatat
gtggatagaattcacatgtttttcagattttcagcagaagaggccaaggatttgatacaa
agatatttgactgagcatccagacccaaataacgaaaacattgttggctacaataataaa
aaatgttggccaagagatgccaggatgcgattgatgaagcatgatgtaaatctcggaaga
gcagtattctgggacattaagaaccggttaccaaggtcagtgaccaccattcagtgggaa
agcagttttgtcagcgtctattccaaggataaccctaacttacttttcaatatgtctggc
tttgaatgtcgtatcttaccaaagtgtcgtacacaacatgatgaattcactcacagagat
ggtgtgtggaatttgcaacatgaaggcagcaaagaaagaactgctcaatgctttttgaga
gtggatgatgaatctttgagtcgttttcataatagggttcgccaaatcttgatggcatct
ggatccacaacatttactaagattgtcaacaagtggaacacagccttgattggtttgatg
acttacttccgagaagctgttgtcaacacccaagaacttcttgatctccttgtcaaatgt
gagaacaaaatccaaactcgtatcaagattggtctaaactccaagatgcctagcagattt
cctccagtagtcttctataccccaaaagaactgggagggcttggtatgctgtcaatgggt
catgttctcatcccccaatctgacctcaggtggtcaaaacagactgatgtgggtatcact
catttccgatctggtataagccacgacgaggaccagcttattccgaatttgtaccgttac
atccagccctgggaatctgagtttattgactctcagagagtttgggctgaatatgctctg
aaacgacaggaggcaaatgcgcaaaataataggctcactcttgaggatttggaagattcc
tgggatagaggaataccaagaataaacactctgttccagagggacaggcacaccttggct
tatgataagggttggagaattaggacagagttcaaacagtatcaagtactgaaacaaaat
cctttctggtggactcatcaaagacacgatggtaaattatggaatctaaacaattacaga
actgatatgattcaagcccttgggggtgtagagggcatattggaacatactttgttcaaa
ggaacatattttcctacatgggaaggtcttttctgggaaaaggcatcagggttcgaagag
tcaatgaaatacaaaaaattaacaaatgctcaaagatctggtttgaatcaaatccccaac
cgtcgattcaccttgtggtggtctcctaccataaacagagcaaatgtatatgttggtttc
caggtgcagcttgacttgacgggtattttcatgcatggtaaaattcccacattgaaaata
tcattgattcaaatcttcagggctcacttgtggcaaaaagttcacgaatcaatagtaatg
gatttgtgtcaggtattcgatcaagagttagatgctttggagatagaaactgtacaaaag
gaaaccattcatcccaggaaatcttacaaaatgaactcgtcctgtgctgatgttctcttg
ttctctgcttataaatggaatgtttccaggccatcgttgttggcagatacaaaagacact
atggataataccactactcagaaatattggatagatgtgcaacttagatggggtgattat
gattctcatgatgttgaacgatacgcaagggcaaagtttttggattacactacagataat
atgtctatatatccttcaccaactggagtactcattgctattgatttagcatacaatctt
catagcgcctatggtaactggttccctggatgcaaaccattaattcaacaagccatggcc
aagatcatgaaagccaatcctgcgttatatgttttaagagaacgtatccgaaaagcttta
cagctgtactctagtgagccaacggaaccatatctgtccagtcaaaactatggagaactg
ttctccaatcaaattatttggtttgtggacgacaccaacgtatacagggtcacaattcat
aaaacatttgaaggaaatttaacaacgaaacccattaacggagccatattcattttcaat
cctaggacaggacagctgtttttgaaaatcatccatacttctgtttgggcggggcagaaa
cgtttgggacagttagccaagtggaagactgcagaagaagttgctgctcttattcgttct
ttgcctgttgaagaacaacccaaacaaattatagtaactagaaagggtatgttggatccc
ttagaagtgcacttgctggatttccccaacattgtcatcaaaggatcagaacttcagctg
cctttccaggcttgcctgaaaatcgagaagtttggtgatcttattctaaaagctacagag
ccacagatggttctgttcaacttgtatgatgattggttgaagtcgatttcatcatatacg
gccttctccagattgattctcatactgagagcattgcatgtcaatacagaaagaaccaaa
gttatattgaaaccagataagaccaccataacagaaccacatcatatttggcctacatta
tcagacgatgaatggatcaaagtggaggtgcaactcaaagatctcatactcgctgactat
ggaaagaaaaataacgtcaacgtcgcttctcttacccagtcagaaattagggatattatc
ctaggaatggaaataagtgcgccgtctgctcaaagacagcagatagcagaaattgagaag
caaacgaaagaacaatctcaacttaccgctaccactactcgaacagttaacaaacatggt
gacgaaattattacaagcacaactagtaactatgaaacagcgacattcagttcgaagaca
gaatggagagtaagagccatatctgccacaaatctgcatcttagaacgaatcacatctac
gtgagctccgatgatataaaagagacaggatatacatacatcttgcccaagaacgtcctc
aaaaagtttgtcactatatcagatttgagagcacaaatttgtgccttcttgtatggggtg
agccctcctgacaacccacaagtgaaggaactccgttgtctggttcttcctccacagtgg
ggtacccaccagacagttcacgttccaaatatgccgccgaaacaccagtttcttgaagac
atggaacctcttggatggatacatacccagccgaacgaactcccccaactgtctccccaa
gatatcacaacacacgcgaagttgatgtcggacaatcctgcctgggatggagagaaaacg
gttattatcacttgttcgttcactccaggatcttgttctcttacagcttacaagttaacg
ccttctgggtatgagtggggtcggcagaataccgacaaaggaaataatcccaaggggtac
ctacctagccattatgaaaaagtgcagatgttgctgtcagataggttccttgggtttttc
atggctccatcacagggatcttggaattacaactttatgggtgttcggcacgatcctagt
atgaactatgacctgaaactagcgaatcccaaagagttttatcacgaggttcacagaccg
gctcatttcctcaatttttcttcattggaggatggcgacggtgctggagcagatggggag
gatgcgtttgcttatattcaataa
DBGET
integrated database retrieval system
