Leptinotarsa decemlineata (Colorado potato beetle): 111515595
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Entry
111515595 CDS
T07512
Name
(RefSeq) CCR4-NOT transcription complex subunit 3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
ldc
Leptinotarsa decemlineata (Colorado potato beetle)
Pathway
ldc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ldc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111515595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ldc03019
]
111515595
Messenger RNA biogenesis [BR:
ldc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111515595
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
111515595
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF5646
CysS_C
Cep57_MT_bd
ZMYND8_CC
Motif
Other DBs
NCBI-GeneID:
111515595
NCBI-ProteinID:
XP_023027576
LinkDB
All DBs
Position
Unknown
AA seq
693 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVMEGVETFDDIWQKVHNAANNNQKEKYEADLKKEIKKLQRLRD
QIKSWIASAEIKDKSILMDNRKLIETTPDDIFHIDFQTDSFESEIEQLLSNKKKKLDKDK
QDRIEELKSKLEKHRFHIRKLETLLRMLDNMSVEVEQIKNIKDDVEYYIESHAEPDFADN
EFIYDEITGMDEVELSGVGLPSSATTDSNDTGGTPTSIISGSSPVSSPPLMNNSNFNHSM
DTTNETDKKVVGKEQPKYLSGLNFDTQNSELLAHLIHTEFSADVPNSFMSQPVKPTPVRA
SVSVTSTTSTSSLMNVSGNSALNYSGNSATSTPSKPTLVSSTPSKLPAPFREASPVQQQA
TTTAPVVPSSNFAAVAASSVAKVTTSGESNPASVISIVSQVQTQNSSNAVTSVHSDPISS
FIRLQNSTNPPQKPFVESHVQSNCISPEPTTNAETLSMEVESTQPVANGADEKISEGMTT
LKSMAQQVIDQAGLQNNSVILESNKSQSQGMSDAHIPPLLGVAPLGAIPLLKEHQTQFQL
MESAFYHMPHLSDSERIRPGWPFEKIERIDVNMGARYLPRTPCPTPAYYIQSPLAHSDSL
EFYQRLATETLFFVFYYMEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKIINEEYE
QGTYIYFDYEKWGQRKKEGFTFEYKYLEDRDLN
NT seq
2080 nt
NT seq
+upstream
nt +downstream
nt
atggcggctacaagaaaattacaaggtgaaatcgatagatgtttaaaaaaagtgatggaa
ggtgttgaaaccttcgatgacatatggcaaaaggttcacaatgctgcgaataataaccag
aaagagaagtatgaagccgatctcaagaaagaaattaagaaactgcagaggttgcgagac
caaataaagagttggattgcatccgctgagatcaaggacaaaagcatacttatggataat
aggaaactcatagagactacccctgatgatatttttcacattgattttcagactgacagt
tttgaatccgaaattgaacagttgctatctaataagaaaaaaaaactcgacaaagacaaa
caggataggatagaggagctgaagtcgaaattagaaaaacataggtttcacatcaggaaa
ttggaaacactattgagaatgttggataatatgtccgtggaagtggaacagataaagaat
ataaaagacgatgttgaatattatatagagagtcacgcagaaccggatttcgccgataac
gaattcatttacgatgagattaccggcatggacgaagtcgaactttcgggagtgggcctt
ccttcgtccgcgacgacggacagtaacgataccggcgggacgccgacgtctatcatatcg
ggttcgtcgcctgtttcatcgccgcccctgatgaacaattcgaattttaaccattccatg
gataccaccaacgagactgataagaaggtcgtggggaaggagcagccgaagtatttgagc
ggtttgaatttcgatactcagaactccgagctcctagctcatctaattcataccgagttc
tctgccgacgttccaaactcctttatgagtcaacccgtgaagccgacgcccgtgcgggca
tctgtgtcggtcacttccacgacgtccacctcctcgctgatgaacgtgagcggcaactcc
gcgctgaactacagcggcaacagcgccacgtcgacgcccagcaaaccgaccctggtgagc
agcacgcccagcaaactgcccgccccgtttagggaagcctcgcccgtccagcagcaggcg
acgacgacagcgccggtggtgccgtcgagcaatttcgctgccgtcgcggcgagttccgtc
gctaaagtgacgacaagcggtgaaagtaaccccgcatctgtgataagtatcgttagtcaa
gtacaaacacaaaattcatctaatgccgttacatccgttcattcagatcctatttcctcg
tttatacgtttacaaaattctacgaaccctcctcagaaacccttcgtcgaatcacatgta
caaagtaattgtataagtcccgaacctaccaccaatgctgaaacgctttctatggaggta
gaatcgactcaacccgtcgcaaatggtgccgacgaaaagatctcagagggtatgacaacc
ctaaaatcgatggcgcaacaagtgatagatcaagcgggtttgcaaaacaactcggtcatt
ctcgagtcgaataagtcgcaaagccaaggaatgtcagacgctcacataccccctttgctc
ggtgtagcgccactgggcgcgataccgctgctgaaagaacaccagacgcagttccagctg
atggaatccgctttctatcacatgccccacctgtccgactctgaaaggatacgaccaggt
tggccttttgagaagatcgaaaggattgacgtaaacatgggtgcaaggtatttaccgaga
actccctgcccaacacccgcctattacatccagagcccgttggcgcattccgacagcctc
gagttttatcagagactcgcgacggaaaccctcttcttcgtcttctactacatggagggc
acgaaggcgcaatatttggccgcgaaggcgctcaagaaacaaagctggaggttccacacg
aagtacatgatgtggtttcagaggcatgaagaacctaagatcataaatgaagaatacgaa
cagggcacgtatatttattttgattatgaaaaatggggacagaggaaaaaggaaggattc
acctttgaatataaatacttagaagatagggaccttaatt
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