Leptinotarsa decemlineata (Colorado potato beetle): 111515963
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Entry
111515963 CDS
T07512
Name
(RefSeq) probable ATP-dependent RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
ldc
Leptinotarsa decemlineata (Colorado potato beetle)
Brite
KEGG Orthology (KO) [BR:
ldc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ldc03041
]
111515963
Enzymes [BR:
ldc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111515963
Spliceosome [BR:
ldc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111515963
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DDE_Tnp_1_7
DEAD
R3H
nSTAND3
ATPase
ResIII
AAA_19
Ank_2
Ank_4
PhoH
Treslin_N
AAA_22
Motif
Other DBs
NCBI-GeneID:
111515963
NCBI-ProteinID:
XP_023027924
LinkDB
All DBs
Position
Unknown
AA seq
769 aa
AA seq
DB search
MEGKSREQNSNFRYNHHSKTSRSTHRKFDPKCQEATPEMLRIEIDNIFKEFLDNPDANEY
IFSANLNNLQRKYIHNKAQKLNIISKSFGKEPDRKLHLKKRGKQLSNQSFLLTPSPNSQK
FLRDFVQAPAPSYQEMENNVRTLYRDKIVGKLINSPAEIPRQLMISENIEHIRSNLPIFE
KKHTIIETIRNNRVVIISSETGSGKTTQVPQFIMEDMAEMRQPCKIICTQPRRISTITAA
ERVSFERSDKVGGSVGYHIKLEQKYGLQTNLIYCTTGVFLRNLMSGHDGLKNITHIILDE
VHERDKLSDFLLICLKQAVSKYTNLKIILMSATVDVNKFLDYFGEGRVLTIPGRLYIIET
MFLENILVLTKYMSQKMKAFLKKEKDKKSVALYSVESEVAGKEENLLVDDALEEYMNFSE
NYDYRIHYEEATAQLSMYYLSEGVSVDYQHSENGRTALMIAAFLADKEFISRLCNMGVLC
LAGVKRAQHLNTDELWNTDSTAPEFFAAVLSEHRFHTLIQAIRFDDKTTREERAKDDNLA
PGRYLFDSFVEKCIQNYSVGEYLTIPAKYGIKIYAAVAARTFYTHNLEVYAGKQPNGPYQ
LANDAASVVKRLLKHCSGSGRNVTVDNYFTSIPLAKDLLEHHKITLVRTLRKNKREIPPI
FFNTKIRKEKISMFAYGQNSNRCMLISYIPKRHKNVLMLSTFHDDDEIDLDTGDQQKPAV
ITFYNLTKGAVDVVDTMKTEYCVTRVSNINTILLLVEHWGHKFPNNLYR
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcaaaagcagagaacaaaactctaatttcagatataaccatcactctaaaact
tcaagaagtacacatcgaaaatttgatcccaaatgtcaagaagcaaccccagaaatgctt
cgaatagaaatagacaatatttttaaagagttcttggataatccagatgctaacgaatat
atattttctgcaaatctcaacaacttgcagaggaagtatatccacaataaagctcaaaaa
ctgaatattatttccaaatctttcgggaaagagccagatagaaagttacatttgaaaaag
agaggtaaacagttgtctaatcaatcatttcttctcacaccaagtccaaattcacaaaag
tttttacgcgattttgtacaagctcctgcaccttcatatcaagaaatggaaaataatgtt
agaacattatatagggataagatcgttggtaagttaatcaactcacctgctgagatccct
cgtcagctgatgatttctgaaaatattgagcatatcagatcaaatcttccaatttttgag
aaaaaacatacaatcatagaaactatcaggaataaccgagtagtgattatttcttctgaa
acgggttcaggaaaaacaacacaagttccacaattcattatggaagacatggcagaaatg
agacagccatgtaaaattatttgcactcaacctagaaggatatcaacaataacagctgct
gaacgagtgtcttttgagagaagtgataaagttggtggttctgtaggatatcatattaaa
ctggaacagaaatacggtttgcagactaatttgatatattgtaccacaggggtatttttg
aggaacttgatgagtgggcatgatggattgaaaaatataactcatatcatcttagatgaa
gttcacgagagggataaattgtctgattttcttttaatatgtttaaaacaagctgtcagc
aaatacactaaccttaaaattattttgatgtctgcaacagttgatgttaacaaatttttg
gattactttggagaaggaagagtgcttactattcctggacgtctgtatataattgaaacc
atgtttctagagaatattcttgttttaaccaaatacatgtcacagaagatgaaagcattt
ctaaaaaaagaaaaagacaaaaaatcagttgctttgtattctgtagaatctgaagttgcc
ggtaaagaagaaaatttactagtagatgatgcacttgaggaatatatgaattttagtgaa
aactatgattaccgaattcactatgaggaagcgactgctcaattaagcatgtattatttg
tctgagggagtatctgttgattatcaacactctgaaaatggtagaacagctttgatgatt
gctgcatttcttgccgataaagaattcattagcagattgtgcaacatgggggtactttgt
ttagcaggagttaaacgagctcaacatttgaatacagatgaattgtggaatactgatagt
accgccccagagttttttgcagcggttttatctgagcatcgttttcatactcttatccag
gcaattcgatttgatgacaaaactacgagagaagaaagagcaaaagatgataatttggca
cctggccgttacttgttcgattcatttgtggaaaaatgtatccaaaattacagtgttggt
gaatatttaaccataccggcaaaatacggtattaagatttatgcggctgtagctgctcga
acgttctacacacataatctggaagtttatgctggaaaacaaccaaatgggccttaccag
ttagccaacgatgcagcaagtgttgtcaaacgacttttgaaacattgtagtggaagcggc
agaaacgttacagttgataattacttcacatcaatccctctagcaaaagatcttctagaa
catcataaaattactttggtgagaaccctaaggaagaataaaagggaaattccacccata
tttttcaatactaaaattcgtaaggaaaaaattagtatgttcgcttatggacaaaattca
aaccgctgtatgctgatatcctatataccaaagcgccataaaaatgttttgatgttatca
accttccatgatgacgatgaaattgatttggatacaggagatcaacaaaaacctgcggta
attaccttctataatcttactaagggggctgtcgacgtagttgatacaatgaaaacggaa
tattgtgttacgagggtcagtaacattaacactattttgctccttgttgaacattggggg
cataaattcccaaataatttataccgctaa
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