Leptinotarsa decemlineata (Colorado potato beetle): 111516591
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Entry
111516591 CDS
T07512
Name
(RefSeq) probable histone-binding protein Caf1
KO
K10752
histone-binding protein RBBP4
Organism
ldc
Leptinotarsa decemlineata (Colorado potato beetle)
Pathway
ldc03082
ATP-dependent chromatin remodeling
ldc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ldc00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111516591
03083 Polycomb repressive complex
111516591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ldc03036
]
111516591
Chromosome and associated proteins [BR:
ldc03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
111516591
Histone modification proteins
HAT complexes
HATB complex
111516591
HDAC complexes
Sin3A-HDAC complex
111516591
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
111516591
PRC2.2
111516591
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
111516591
Heterochromatin formation proteins
Other heterochromatin formation proteins
111516591
Chromatin remodeling factors
NuRD complex
111516591
NuRF complex
111516591
NuRF complex (fruit fly)
111516591
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
EIF3I
WD40_WDHD1_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
Beta-prop_WDR19_1st
WD40_RFWD3
ANAPC4_WD40
eIF2A
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
MIOS_WD40
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
111516591
NCBI-ProteinID:
XP_023028508
LinkDB
All DBs
Position
Unknown
AA seq
428 aa
AA seq
DB search
MGDKGDAETFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDG
KDHSIHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKIEIE
IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPSGECHPDLRLRGHQK
EGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKTVFTGHTAVVEDVAWHLL
HESLFGSVADDQKLMIWDTRCNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTV
ALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSAED
AEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPEQQA
SDIEATAS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgggggataaaggggatgcagaaacatttgatgatgctgtggaagaaagagtcattaat
gaagaatacaaaatatggaaaaaaaataccccctttctgtatgatttggttatgacacat
gctttggagtggccctctcttactgcccaatggcttcctgatgttactagaccagatggt
aaagatcattccatacatcggttgattttgggaactcatacttctgatgaacaaaatcac
cttttgattgcaagtgttcaattacctaacgaggatgctcagtttgatgcctcacactat
gataatgaaaaaggagaatttggaggattcggatcagtctctggtaaaatcgaaattgag
ataaaaatcaaccacgagggggaagtgaacagagcaagatacatgcctcaaaatccttgt
gttattgccacaaagaccccatctagtgatgtattggtatttgattacacgaaacaccct
agtaaacctgatccaagtggagaatgccaccccgacctccgtttacgtggtcaccagaag
gaaggatatggtctctcttggaatcccaatttgaatggatatcttttgtccgccagtgat
gaccatacaatttgcttgtgggatatcaatgctacacctaaggaacaccgagttattgat
gcaaagaccgtgttcacgggacatactgccgtcgtggaagacgtagcctggcaccttcta
cacgaaagtctctttggatcggtagctgatgaccagaaactcatgatttgggatacccgt
tgcaataacaccagcaaaccgtcacacaccgtcgatgcacacactgctgaagtcaattgt
ctcagtttcaatccctattccgaattcatccttgctactggaagcgctgataagacagta
gctttgtgggacctcaggaatttgaagctgaagttgcatagtttcgagtcgcacaaggac
gaaatattccaagttcaatggtctccccataacgaaaccatcctagcatcgtctggtact
gacaggcggttgcatgtttgggatttgagcaagatcggggaagaacagagcgccgaggat
gcggaagatggtcctcccgaacttctcttcattcacggaggacatacagccaaaatatca
gacttcagttggaatcccaacgagccctgggttatttgctccgtatcggaagataatatt
atgcaagtgtggcagatggcagagaatatttacaatgatgaagaacctgaacaacaagct
tcagatatcgaagccactgcaagttga
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integrated database retrieval system
