Leptinotarsa decemlineata (Colorado potato beetle): 111517083
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Entry
111517083 CDS
T07512
Name
(RefSeq) pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
ldc
Leptinotarsa decemlineata (Colorado potato beetle)
Pathway
ldc03040
Spliceosome
ldc04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ldc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111517083
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111517083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ldc03041
]
111517083
04121 Ubiquitin system [BR:
ldc04121
]
111517083
03400 DNA repair and recombination proteins [BR:
ldc03400
]
111517083
Enzymes [BR:
ldc01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
111517083
Spliceosome [BR:
ldc03041
]
Complex B
Other components
Prp19 complex
111517083
Complex C
Prp19-CDC5 complex
111517083
Ubiquitin system [BR:
ldc04121
]
Ubiquitin ligases (E3)
U-box type E3
111517083
DNA repair and recombination proteins [BR:
ldc03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
111517083
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Prp19
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_WDR19_1st
NBCH_WD40
Beta-prop_Vps41
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_IFT122_1st
eIF2A
Beta-prop_DCAF4
Beta-prop_Nup120_160
WD40_like
U-box
Beta-prop_WDR35_TULP_N
PAS_11
Ge1_WD40
Cytochrom_D1
WDR54
PUMA_CC
zf-Nse
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
111517083
NCBI-ProteinID:
XP_023028900
LinkDB
All DBs
Position
Unknown
AA seq
502 aa
AA seq
DB search
MALYCSISNEVPEHPVVSPASGAIFEKRIIEKYIQDNGVDPISGKELSIDDLVEIKIPPI
VKPKPPSATSIPATLKLLQDEWDAIMLYSFTQRQQLQTARQELSHALYQHDAACRTISRL
NKEVTAAREALATLKPQAGITTVPQPAVAAEAGGVANQPTEQAGMSMEVIEKLQEKATVL
TQERKKRGRTVPEELTTQEQLRSFKTVASLTGLHSASIPGILALDVHSSDTSKVLTGGND
KNATVFNKDTEQMVAILKGHTKKVTKVIYHPDEDLVLTASPDSTIRVWNVPTSQTTLLLR
AHDGPVTGLSLHPTGDYVLSTSEDQHWAFSDIRTGRLLTKVTDNTNVPLTTAQLHPDGLI
FGTGTGDSQVKIWDLKEQSNVANFTGHSGAITTISFSENGYYLATAADDACVKLWDLRKL
RNFKTLQLDEGYQIKDLCFDQSGTYLAVAGSDVRVYLCKQWQELKVFNDHTAMATGVRFG
KHARFIASTSMDRTLKLYSLEK
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggcgttatattgttccatttccaatgaagtgccggagcacccagtggtatctcctgca
tcaggagccatattcgagaaaagaattattgagaaatacattcaagacaatggcgtagac
cctattagtggaaaagaactcagtatcgatgatctagttgaaatcaaaatacctccgata
gtgaaaccaaaaccgcctagcgctactagtattcctgcgacgctaaagttattacaggat
gaatgggatgccataatgttgtacagttttacacaaaggcagcagcttcaaactgcccga
caagaactcagccatgctttatatcaacacgatgccgcttgcagaacaatttctaggtta
aacaaagaagtcactgcagctagagaagctttggctactttgaaaccccaagctggtatt
acgactgtacctcagccggctgttgctgcagaagctggcggagtggcgaatcaaccaact
gaacaagcaggaatgagcatggaagtgatagagaaactgcaggagaaagcgacagttctg
actcaggaacggaaaaagcggggcagaaccgttcccgaagagttgacaactcaagaacaa
ttgagatctttcaaaacggtggcttcgttaacaggtttgcattcggccagtattccggga
attttagctttggatgttcacagttcagataccagtaaagtactcactggaggtaatgat
aaaaacgctacggtattcaacaaggacacagagcagatggttgctattttgaagggccat
acaaaaaaagtcacgaaagtaatttatcatcccgatgaagatcttgttctcacagcttct
cctgactcaacaatacgtgtttggaatgtgcctacttcacagaccactttgctgttaagg
gcgcatgatggacccgtcacaggcctgtcgctgcatccaactggagattacgttttgtct
acctctgaggatcaacattgggcattttcggacataagaacaggacgtttattgaccaaa
gttacagataatacaaacgttcctctcacaacagcccaactacatcctgacggtcttatt
ttcggtactggaactggagattcccaagtgaaaatttgggatttgaaagagcaaagcaac
gtagctaacttcacaggacattctggggcgatcaccaccatatcgttttctgaaaatggt
tattatcttgccactgcagcagatgatgcttgcgtaaaactgtgggatttgcgtaaattg
aggaatttcaaaaccttgcagcttgacgaagggtatcaaatcaaagacttatgtttcgat
cagagcggaacatatttggcagtggccggatctgatgtgagggtttatctctgtaaacag
tggcaggagctcaaagttttcaatgaccacacagcaatggcgacaggtgtgcggtttggt
aagcacgctagattcatcgcatcgacttctatggatagaacattgaaattgtatagttta
gagaaataa
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