Leptinotarsa decemlineata (Colorado potato beetle): 111518277
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Entry
111518277 CDS
T07512
Name
(RefSeq) probable ATP-dependent RNA helicase DDX55 homolog
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ldc
Leptinotarsa decemlineata (Colorado potato beetle)
Brite
KEGG Orthology (KO) [BR:
ldc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ldc03009
]
111518277
Enzymes [BR:
ldc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111518277
Ribosome biogenesis [BR:
ldc03009
]
Eukaryotic type
Pre-60S particles
Helicases
111518277
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
TSC22
Motif
Other DBs
NCBI-GeneID:
111518277
NCBI-ProteinID:
XP_023030455
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MSKSWKELNICFHEEVENGIKSLNFPKATPIQTFTIPQLLNKKDVAAEAVTGSGKTLAFL
IPIVEILKRREVEEIWKKHQVGALVISPTRELALQTKFVLDALLKHVKNLTQILLVGGNS
VEDDVNNFKTNGGNIIICTPGRFEDLLTHKYDINLASSLKSLEILILDEADRLLDLGFQK
TINIILSYLPRQRRTGLFSATQTKEVEDLIRAGLRNPVLVSVSAKATQSTPDLLNNYYIV
TKNDGKLCTIISFLKKNKVQKAMLFLPTCAAVDYWSNVFPRIMPSNLDLPVLAIHGKMKA
KRKSIMETYRTADKALLLCTDIMARGIDIPEVDWVLQWDPPVSASSFVHRVGRTARQGQQ
GSALVLLLENEEAYVPFIETNQRVKLEPIEDLATTEEIEELRDKIRNLQRKDRAIMEKGT
QAFVSHIRAYSKHECSLLLKVKELPLGAVAATYGLLQLPKMPEMKNRDLSDFPEISNLNI
DTVPYKDRIREKVRLQKMEQYKETGSWPGYKQKFIKKSSEPWSVAKQKKDERKERKQKRK
QIKQTKLANNEPLKKKRKGISEEDLEELKRDIMLLKKLKKKKISNEDYEKEIGLL
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagtcgtggaaagaattgaatatttgttttcacgaagaagtagaaaatggtatc
aaatcattgaattttccaaaagctactccaattcagacattcaccataccacaactgctt
aacaaaaaagatgttgctgcagaagctgtgacaggttctggaaagactctggcgttttta
atacccattgtagaaattctgaagcgaagagaagttgaagaaatatggaaaaaacatcaa
gtaggagctctcgtaatatctccaacaagagaattggccttgcaaacaaaatttgtttta
gatgcattgttgaaacacgttaaaaatttgactcaaattctgctggtaggtggcaacagt
gtagaagatgatgtaaataacttcaaaaccaatggcggaaatattataatttgtactcca
ggcagatttgaggatttactcacacacaaatatgatatcaacttagcaagttccttgaaa
agtttggaaatcctaatattagatgaagcagatagacttcttgatttaggtttccaaaag
actataaatataatactaagttatttaccgaggcaaagacgtacaggattattttctgct
acacaaacaaaagaagtggaagatctgataagggctggtttacgtaatccagttttggtc
agtgtttctgcgaaagctacccaaagtacacctgatttgttgaacaattattatattgtg
acaaaaaatgatggcaaattgtgcacgataatatcattcttgaagaaaaataaagtgcaa
aaggctatgttatttctaccgacttgtgccgctgttgattactggtctaatgtcttccct
cgcattatgcccagcaacttggatttacctgttctagccatacacggtaaaatgaaagct
aaacgtaaaagtataatggaaacttacagaaccgcagataaagccctattactgtgtact
gatataatggctagaggaatagacattccagaagtggattgggtgctacagtgggaccca
ccggttagtgctagttcttttgtacatagggtaggtagaactgcccgtcaaggtcagcaa
ggatcggcactagttctcttacttgaaaatgaggaagcctatgtaccttttattgaaacc
aatcagcgtgttaaactcgaaccaattgaagaccttgccacaactgaagagattgaagag
ctgagggataaaattagaaatcttcagagaaaagatagagctataatggaaaagggtaca
caagcctttgtgtcacatatcagagcatattcaaaacatgaatgttccttattacttaaa
gtaaaggagctacctttgggtgcagtggcagctacgtatgggttattacaattacctaaa
atgccggaaatgaaaaatagagatctaagtgactttcctgaaatatctaacttaaacatt
gacactgtgccttataaagacagaatcagggagaaggttagactacaaaaaatggaacag
tataaggaaacaggctcatggccaggatataaacagaaatttataaaaaagtcttctgaa
ccgtggtctgtagcaaaacagaaaaaagatgagagaaaagaaaggaaacagaaaagaaaa
caaataaaacaaacaaaattggccaacaacgaaccattaaagaaaaaacggaaaggaata
agtgaagaagatctggaggaactgaaacgtgatataatgttattgaagaaattgaagaaa
aagaaaatttccaatgaagactatgaaaaagaaatcggtttactgtaa
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