Lactobacillus delbrueckii subsp. bulgaricus ND02: LDBND_0331
Help
Entry
LDBND_0331 CDS
T01360
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
lde
Lactobacillus delbrueckii subsp. bulgaricus ND02
Pathway
lde03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lde00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LDBND_0331 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lde03021
]
LDBND_0331 (rpoB)
03400 DNA repair and recombination proteins [BR:
lde03400
]
LDBND_0331 (rpoB)
Enzymes [BR:
lde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LDBND_0331 (rpoB)
Transcription machinery [BR:
lde03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LDBND_0331 (rpoB)
DNA repair and recombination proteins [BR:
lde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LDBND_0331 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
CLU_N
Motif
Other DBs
NCBI-ProteinID:
ADQ60382
LinkDB
All DBs
Position
343095..346757
Genome browser
AA seq
1220 aa
AA seq
DB search
MFSLLNGHVVNYGQHRTRRSFSRIKEILPLPNLTDVQTESYKWFLDEGVKEVFDDILPIS
DASGRLTLEYVDYKLQEPKYTVDESRKHDATYSAPMHVTLKLTNHETGEIKTQDVFFGDL
PLMTKSGSFIVNGAERVIVSQLVRSPGVYYSGEFDKNGRQIFGTTVIPNRGAWLEFETDA
KNISYVRVDRTRKLPLSVLVRALGFGSDSEIKEIFGDSDTLDLTLDKDVHKNPADSRVAE
ALKDIYDRLRPGEPKTTDSSRSLLVSRFFDPRRYDLAAVGRYKVNKKLSLKNRLLGYTLA
ETLADPDTGEVLAAKGTVVNNEVMDVLKDYLDRDDFKTVTYTPSDEGVIPEPVTVQEIKV
FSREIPDREIKLISNGHIAEDVKCITPADIIASVNYFLELQEGVGNIDDIDHLGNRRIRR
VGELLQNQMRIGLARMERVVRERMSIQDAATVTPQQLINIRPIVGSIKEFFGSSQLSQFM
DQNNPLGELTHKRRMSALGPGGLSRDRAGYEVRDVHYTHYGRLCPIETPEGPNIGLINSM
ATYAIINKYGFLETPYRRVSWATHKVTDKIDYLTADEEDNYIIAGANTPLNEDGSFVDDV
ILCRHREDNVEVSPDRIDYIDVIPKQVVSVTSACIPFLENDDSNRALMGANHQRQAVPLI
NPHGPLVATGMEYRAAHDSGDALLAEADGEVEYVDANEIRVRREDQTLDTYTLEKYRRSN
ATKNYNQTPNVKRGDKVVDGQVIANGPSMADGELALGQNPVIAFTTWNMYNFEDAIMLSE
RLVKEDVYTSIHIEDYDSEARDTKLGPEEITREIPNVGEDALKDLDENGIIRIGAEVHDG
DILVGKVTPKGITELSAEERLLHAIFGEKAREVRDTSLRVPHGGGGVVQDVQVFTREAGD
ELAPGVNTLVRVYIVQKRKIQVGDKMSGRHGNKGTVALIAPVEDMPYLPDGTPVDICLNP
MGVPSRMNIGQLLEIHLGRAARALGIHVATPVFDGASEDDVWDFVREAGVDSDGKTVLYD
GRTGEPFHNRVSVGVMYYLKLTHMVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEME
VWALEAYGAAYTLQEILTYKSDDVVGRVKAYEAIVKGERITKPGVPESFRVLVKELQSLG
LDLRVLDSDENEVELRDMDEDSNEHVNIDALSRLAEAQEKKKLAEEEAEIAAEGSAEEDA
AEADADANEAETADDDKASK
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgttttccttgctaaatggacacgtagtaaattacggacaacaccggacaagacgcagc
ttctcacggattaaggaaatcctgccgctgccaaacttgaccgacgtacagactgaatca
tacaagtggttccttgacgaaggcgttaaggaagttttcgacgacattctgccaatcagc
gacgcttctggccgcctgactctggaatacgtcgactacaagctgcaagaacctaagtat
actgtcgatgaatcacgcaagcacgacgcgacttactccgctccaatgcacgtgactctg
aagctgaccaaccacgaaactggcgaaatcaagacccaagacgtcttcttcggcgacttg
ccgctgatgaccaagtccggctccttcatcgttaacggggcggaaagagttatcgtttcc
cagctggttagatcacctggtgtctactacagtggcgaattcgacaagaacggccggcaa
atcttcggcacgactgtcatccctaaccgtggggcttggctggaattcgaaactgacgcc
aagaacatttcctacgtccgggttgaccggacccggaagcttcctttatctgtcctggtc
cgggccctgggctttggctctgacagcgaaatcaaggaaatcttcggcgacagcgacact
ttggacctgactttggacaaggatgttcacaagaacccagcagacagccgggtagcagaa
gccttgaaggacatctacgaccgcctgcgtccaggtgaaccaaagactaccgactcatcc
cggagcctcctggtttcccgcttctttgacccacgccgttacgacctggctgctgttggc
cgctacaaggtcaacaagaagctgagcttgaagaaccggcttttgggctacactttggct
gaaaccctggctgaccctgacactggagaagttctggctgccaaggggacggttgtcaac
aacgaagtcatggacgttctgaaggactacctggaccgcgacgacttcaagactgttacc
tacaccccatctgatgaaggtgtaatcccagaacctgtaactgttcaggaaatcaaggtc
ttctcccgtgaaattcctgaccgggaaatcaagctgatctccaacggccacattgctgaa
gacgttaagtgcatcactccagccgacatcatcgcttctgtcaactacttcctggaactc
caagaaggcgtcggcaacatcgacgacatcgaccacttgggtaaccgtcgcatccgccgg
gttggcgaattgctgcaaaaccagatgcggatcggtttggcccggatggaacgggttgtc
cgcgaacgtatgtcaattcaagacgcggctacggttactccgcagcaattgatcaacatc
cggccaatcgttggttcaatcaaggaattcttcggttcatcccagctttcccaattcatg
gaccaaaacaacccgctgggtgaattgacccacaagcggcgtatgtccgccttggggcct
ggtggtctgtcccgtgaccgggccggctacgaagtccgggacgttcactacacccactac
ggccgtctgtgcccaatcgaaacgccagaaggccctaacatcggtttgatcaactccatg
gccacttacgccatcatcaacaagtacggcttcctggaaaccccataccggcgcgtttcc
tgggcaacccacaaggttaccgacaagatcgactacttgactgccgatgaagaagacaac
tacatcatcgccggggccaatactcctctgaacgaagacggctccttcgttgatgacgtg
atcctttgccggcaccgggaagacaacgtcgaagtaagtccagaccggatcgactacata
gacgttattccaaagcaggttgtttccgtaacttccgcatgtattccattcctggaaaac
gacgactccaaccgggccttgatgggggccaaccaccaacgtcaggctgttcctttgatc
aacccgcacggtccgcttgtggctactggtatggaataccgggcagctcacgactccggt
gacgccttgctggctgaagcagacggtgaagttgaatacgtggacgcaaacgaaatccgc
gtccgccgcgaagaccagacactggacacttacacccttgaaaagtaccgccggtcaaac
gcgactaagaactacaaccagacgccaaacgtcaagcgcggcgacaaggttgttgacggc
caggtaattgccaacggtccgtcaatggctgatggcgaacttgccctgggtcaaaacccg
gttatcgccttcaccacttggaacatgtacaacttcgaagacgccatcatgctgagcgaa
cgcctggttaaggaagacgtctacacttcaatccacattgaagactacgactcagaagcc
cgtgacaccaagctggggccggaagaaattacccgggaaatccctaacgttggtgaagac
gctttgaaggacctggacgaaaacgggatcatccggatcggtgccgaagttcacgacggc
gacatcctggtcggcaaggttacccctaaggggataactgaactgagcgctgaagaaaga
ctgctgcacgccatctttggtgaaaaggcccgtgaagtccgtgatacttcattgagggta
cctcacggcggtggcggtgtggttcaagacgttcaagtcttcacccgtgaagccggcgac
gaactggcaccaggtgttaacaccctggttcgggtttacatcgtacagaagagaaagatc
caagtcggggacaagatgtccggtcgtcacggtaacaagggtacggttgccctgattgct
ccagttgaagacatgccttacctgccagacggtactccagtcgacatctgcttgaaccca
atgggtgtgccatcacgtatgaacatcgggcagctgcttgaaatccacttgggccgggca
gcccgggccttgggtatccacgtggctactccggtattcgacggggccagcgaagacgac
gtttgggactttgtccgcgaagccggtgttgactcagacggtaagactgtcctttacgac
ggccggaccggtgaaccattccacaaccgggtttcagtcggggttatgtactacctgaag
ctgactcacatggttgacgacaagatccacgcgcggtcaatcgggccttactcacttgtt
acccaacagcctttgggtggtaaggcgcaattcggtggccagcgttttggtgaaatggaa
gtctgggctttggaagcctacggtgcagcctacaccctgcaagaaatcctgacctacaag
tctgacgacgttgtcggccgtgtcaaggcctatgaagcaatcgtcaagggcgaaagaatt
actaagccaggcgtgcctgaatcattccgcgttttggtcaaggaactgcaatcattgggt
ctggacctgcgcgttttggacagcgacgaaaacgaagttgaactgcgcgacatggacgaa
gactcaaatgaacatgtaaacatcgatgctttatctcgccttgcggaagcgcaagaaaag
aagaagttggccgaagaagaggccgaaattgccgcggaaggcagcgcggaagaagacgca
gctgaagcagatgctgatgcaaatgaagctgaaactgctgacgacgacaaggcttcaaag
taa
DBGET
integrated database retrieval system
