Lactobacillus delbrueckii subsp. bulgaricus ND02: LDBND_0741
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Entry
LDBND_0741 CDS
T01360
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lde
Lactobacillus delbrueckii subsp. bulgaricus ND02
Pathway
lde03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lde00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LDBND_0741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lde03019
]
LDBND_0741
03400 DNA repair and recombination proteins [BR:
lde03400
]
LDBND_0741
Enzymes [BR:
lde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LDBND_0741
Messenger RNA biogenesis [BR:
lde03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LDBND_0741
DNA repair and recombination proteins [BR:
lde03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LDBND_0741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
ADQ60787
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All DBs
Position
750525..752294
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AA seq
589 aa
AA seq
DB search
MLDPQQVLKKYFGYDSFRPGQSEIIEKVFQGKNVLAVMPTGGGKSLCYQIPALMIPGTTV
VISPLISLMKDQVDSLREYGIPAAALNSSTAQEDVNPILRACYEGKIKLLYVTPERMEMD
YFRYQLNFLEVNLVAIDEAHCISQWGHDFRPAYRKLKDGINALHTHPNVLALTATATKAV
REDIGQQLDISEENFVITSFERKNLHFKLVNAPKNSRAYIVNYLKQHRGEAGIIYSNTRK
KVEGLTEFLRRKGFNVAAYHAGMSNEERAQVQDDFQYDRIPLIVATNAFGMGIDKSNVRF
VLHANSAKNLEAYYQEAGRAGRDGLESEAVMLFHPSDLRQFRWFIDNSEADESYRQVQYQ
KLQTISDYANTDECLQQFIVRYFGQDCLPCGKCSNCLNSGDFQDVTAEAQAIIGMVYDLD
GRYGKKIVAQAVTGSKVKKISEIRADECVHYGLLKGKKQADVSSLVDYLVSKGYLQLVGD
RYPLVHVTNRGWDVLDGKARVKRRQEVKSEQLAETGGDQVLFEELRKARRILAQKRGVPP
FVIFSDLSLRDMAARKPQTPEELLQCSGVGDAKLANYGKAMLAVIKKYG
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
ttgcttgatccacagcaggtcttaaagaagtattttggctatgacagtttccggccgggc
caaagtgaaattattgaaaaagttttccagggaaaaaatgtcctggcagtcatgccgacc
gggggcgggaagtcgctttgctaccagatcccggccttgatgattcccggtacgactgtg
gtgatctcacccttgatctccttgatgaaggatcaggttgacagcctgcgcgagtacggg
ataccggccgcggcacttaacagctccacagcccaggaagacgtcaatcccatcttaaga
gcctgctatgaagggaaaatcaagctgctctacgtgacgccggaacggatggagatggac
tatttccgctaccagctcaactttttggaggtcaacctggtcgccatcgatgaagcccac
tgcatttcccagtgggggcatgacttccggccagcctaccggaagctaaaggacgggatc
aatgccctccatacccatcccaatgttctggccctcacagctacggccactaaggcggtc
agagaggacatcggccagcagctggacatttccgaggagaatttcgtcatcaccagtttt
gaaagaaaaaatctccacttcaagctggtcaacgcgccgaaaaacagccgggcctatatc
gtcaactacttgaagcagcaccggggtgaggcgggcattatttattccaacacccggaaa
aaggtggaggggctgaccgaatttttgcgccggaagggctttaacgttgccgcctaccac
gccgggatgtccaatgaggaacgggcccaggtccaagacgacttccagtatgaccggatt
cccttgatcgtggctacgaatgcttttggcatggggatcgacaagagcaatgtccgcttt
gtcctgcatgcaaacagcgccaaaaacctggaggcctattaccaggaagccggccgggcg
ggccgtgacggtctggagagtgaggccgtgatgctttttcaccccagtgatcttcgccag
tttcgctggtttatcgacaattctgaagctgatgagtcctaccggcaggtccagtaccaa
aagctgcagacgatcagcgactatgccaatacagacgagtgcctgcagcaatttatcgtc
cgctactttggccaggactgcctgccctgcggcaagtgcagcaactgcttaaacagcggc
gacttccaggacgtgacggccgaagcccaggctataatcggcatggtctatgacttagac
ggccgctatggcaaaaaaatcgttgcccaggccgtgactgggtccaaagtcaagaagatc
agtgagatcagggctgatgagtgtgtccactacggcctgctcaagggaaaaaagcaggct
gatgtaagcagcctggtcgactacttggtttcaaagggctacctgcagctggtgggggac
cgctatcccttggtccatgtaaccaaccggggctgggacgttttggacggcaaggccaga
gtcaaaaggcgccaggaagtcaaaagcgagcagcttgctgaaacaggcggtgaccaggtc
ctctttgaagagctcagaaaggcccgccggatcctggcccaaaagcggggagtgccgcca
tttgtcatcttttccgacttgtctttgcgggatatggcagccaggaaaccgcaaacgccg
gaagagctgctccagtgcagcggggtcggggatgccaaactggccaactatggaaaggcc
atgctagccgtaatcaaaaaatatggataa
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