Lactobacillus delbrueckii subsp. bulgaricus ND02: LDBND_0759
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Entry
LDBND_0759 CDS
T01360
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit (DnaE)
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lde
Lactobacillus delbrueckii subsp. bulgaricus ND02
Pathway
lde03030
DNA replication
lde03430
Mismatch repair
lde03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lde00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LDBND_0759 (dnaE)
03430 Mismatch repair
LDBND_0759 (dnaE)
03440 Homologous recombination
LDBND_0759 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lde03032
]
LDBND_0759 (dnaE)
03400 DNA repair and recombination proteins [BR:
lde03400
]
LDBND_0759 (dnaE)
Enzymes [BR:
lde01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LDBND_0759 (dnaE)
DNA replication proteins [BR:
lde03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LDBND_0759 (dnaE)
DNA repair and recombination proteins [BR:
lde03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LDBND_0759 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ADQ60804
LinkDB
All DBs
Position
769784..773263
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AA seq
1159 aa
AA seq
DB search
MQTISANTILASPMKTADLVQGAKERGYSAVALTDINVTFGLADFYQEAVKAGIKPLLGL
QGRFKGIELEEAEYDLVFLAQSQKGYQSLMRLSSFLNIASGDLAGPAPSLADLPELSDLT
VIVPAGLTSELRQLNKLRNSGEEYVKKLQAFLPKGLPLYLGVYPAESAAAYDAYVKKLAE
ISALPITVVEDVRYLDPGDQFLCKVLQAIKERRVLDEHELTLMAEGQGSHWLRPAPVLED
ACREMGLEEALANSGKIAASCHAKIPFKEPQLPVFPQATGLSSDQYLEKLAFAGLEKLGL
RQGIYHARLQKELAVIQQMGFADYFLIVGDIVNYCRQRGALVGPGRGSAAGSLVAYALGI
TQIDPLKYDLLFERFLNPARADMPDIDLDFTTSGRKLAFAYVQEKYGAKARFGEGSDLVA
RILALTTMKAKSVLERTGQVFGLTLPAIARLKQAMGAAKTLAEAGQQAEFKALVAASPLT
RLLYQTAARLEGLPEDTGTHAPGLVISEEPLSRQIGLMTGKEAPLWTVEQTKKYVEKYGL
LKIDFLTLDNLELLEGVLAEIQKSSGPLDLTRLPLDDPDTLRLFARGETQQIFQFNSSGM
QEVLRKIQPRTFDDLSVAVALYRPGPIASIPLYVARKNGTSPVQYPDPSLKEVLGPTYGI
LVYQEQVMQTARIFAGFSLAEADVFRNAISKKQAGLLAEEKGKFVAGAVRKGHSRQAAEA
VYALIEPFANYGFNHSHAVAYALLAYWQAFLSVHFPREFYLEKLRASRGKEKGAIIRQAR
KAGVEILGPDINLSQAEARLFEGRIYLGLKDIMGITPAFLDQLLALKRPVTSFPAFLRQL
DTKELKEKQLVPLIEAGLFDQVSPNRASLLVNCGNMLNTARLSQKSLVLQDFLAAKEENV
PMPTAAEKVAMEERAMGFAVTASPLEIAGKALAKRYGAKPFAGLALNETGQVLAQFIKKN
NWRVKRGARAGELGSNAVFSDGQTSEKVTIFTSQYRRFAQILKENAVYLLQVDKKEDQKD
SRGYQLILQDLRLLDLKQLEQAEEVKPVTVKPKDLALERYFDQHYRTKRLGDFQVKERGL
ALAKLLAVRYQEDKRGRKMATLILADSSGRYRCWLFAGELAKLTLNLQVNDYYLLKLEAL
GQRESLDFKIWDMKQVNLR
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
ttgcagacgatttcggccaataccattctggccagcccaatgaaaacggctgacctggtc
cagggggcaaaagagcggggttatagcgccgtggcactgacggacatcaatgtaactttt
ggcctggccgacttttaccaggaagccgtaaaagcagggatcaagccccttttgggcctg
cagggccgctttaagggaatcgaattggaagaagcagaatatgacctggtctttttggct
caaagtcaaaaaggctaccagtccttgatgcgcttgtccagctttttaaatatcgcttct
ggcgaccttgccggcccggcgcctagcctggctgacctgcccgaattgtctgacttgacc
gtgatcgtgccggccgggctgaccagcgaactgcgccagcttaataaactgaggaacagt
ggtgaggaatatgttaaaaagctccaggcctttttgccaaaaggcctgcccttatactta
ggcgtttacccggctgaatccgcggccgcttatgatgcctatgtcaaaaagctggcagaa
atttcagccttgcccatcacggttgttgaggacgtccgctacttagacccgggcgaccag
tttctttgcaaggtcctgcaggccattaaggaaagacgggtcctggatgagcatgaactg
accttgatggcggaggggcaggggtcacattggctgcggcccgcgcctgtcctggaagat
gcctgccgggaaatgggcttagaagaagctttggccaacagcggcaaaatcgcggccagc
tgccatgctaagattccttttaaggagccacagctgccggtctttccgcaagcaacagga
ctttcttccgaccaatatttggaaaagctggcttttgccggcctggaaaaattaggcctt
aggcagggaatttaccacgcccgcttgcaaaaggaactggccgtcatccagcagatgggc
tttgctgactactttttgatcgtcggcgacatcgtcaattactgccggcaaagaggcgcc
ctggtcggcccgggccgggggtcagctgccgggtccttggtagcctatgctttaggcatt
acccaaattgaccccttaaaatacgacctgctctttgagcgcttcttaaaccccgcccgg
gccgacatgcccgacatcgacctggactttaccacgagcggacgaaagctggcttttgct
tacgtgcaggaaaaatacggtgctaaagcccgctttggcgagggctctgacctggtggcc
cggattttggccttgacgaccatgaaggccaaaagcgtccttgagcggaccggccaggtc
tttggcttaaccctgccggctatcgcccgcctcaagcaggccatgggggcagccaaaact
ttggccgaagctggccagcaggctgaatttaaggccctggtcgctgccagtcccttgacc
cgccttctttatcaaaccgccgcaaggctggaagggctgccggaagacacgggcacccac
gctcccggcctggtcatcagtgaagagcccctatccaggcagatcggcttgatgactggg
aaagaagcccctctgtggacggttgagcagaccaaaaagtacgttgaaaagtatggtctc
ttaaagatcgactttctgaccctggataatttggaacttttggaaggcgttttagcagag
attcaaaagtccagcggccccctggatttgacccggctgcccctggatgatccggatacc
ttgcgcctttttgcccgcggggagacccagcagattttccagtttaattccagcgggatg
caggaggtcttaagaaaaatccagccccggacttttgacgacttgtccgtcgccgtggcc
ctttaccggccgggcccgatcgccagcatccccttgtacgtcgcccggaaaaacgggacc
agcccggttcagtatcctgaccccagcttaaaagaagtcctgggaccgacctatggtatt
ttagtctaccaggagcaggtcatgcagacggcccggattttcgcgggcttcagcctggcg
gaggctgacgtcttccggaacgcgatttccaaaaagcaggctggccttttagccgaagaa
aagggcaagtttgtcgctggcgctgtcagaaagggacacagccggcaagccgccgaggca
gtctacgccttaatcgagcctttcgccaactacggcttcaaccactcccacgccgtcgcc
tatgcccttttggcctactggcaggccttcttgtccgtccatttccctagggagttctac
ttggaaaagctccgggccagccggggcaaggaaaaaggggccatcatccgccaggccaga
aaggccggcgttgagatcctggggcccgacatcaacttgagccaggcagaggcccgcttg
tttgaaggccggatctacctgggcttaaaggacattatggggattacgccggcctttttg
gaccagcttctggccctaaaacggccagtaaccagcttcccggcttttttgcggcagctg
gataccaaggagttgaaagaaaagcagctggtccccttgatcgaagccggcctctttgac
caggtcagtcccaaccgggccagtcttttggtcaactgcggcaacatgctcaatactgcc
cgcttgtcgcaaaaaagcctggtcttgcaggactttttagccgccaaggaagaaaacgtg
ccaatgccgacggcagcagaaaaggtggctatggaagaaagagccatgggctttgccgta
acggcatctcccctggaaattgccggcaaggccctggccaagcgttatggggccaagcct
tttgctggtcttgccttaaacgagaccgggcaggtgcttgcccagttcattaagaaaaac
aactggcgggtcaagcggggagcccgggccggtgagttaggcagcaacgccgtctttagc
gacggacagaccagcgagaaggtgaccatttttaccagccagtaccgccgctttgcccaa
attctaaaagaaaacgccgtctacctcctgcaagttgacaaaaaagaagaccaaaaggac
agccggggctaccagctgatcttgcaggatttgcgccttttggacttaaagcagctcgag
caggctgaagaagtcaagccggttaccgtcaagcctaaggacctggctcttgaacgttat
tttgaccagcactaccggaccaagcgcttaggcgacttccaggttaaagaaaggggcctg
gccctggccaagcttttggctgtccgctaccaggaagacaagcggggacggaagatggcg
actttgattctggctgattcttccggccgctacaggtgctggctttttgccggggaactg
gccaaattaactttgaatttacaggtaaatgactactacctgctcaagctggaagcttta
ggccaaagagagagcctggacttcaaaatttgggacatgaagcaggtaaatttgcgctga
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