Lactobacillus delbrueckii subsp. bulgaricus ND02: LDBND_0895
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Entry
LDBND_0895 CDS
T01360
Symbol
addB
Name
(GenBank) ATP-dependent helicase/deoxyribonuclease subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
lde
Lactobacillus delbrueckii subsp. bulgaricus ND02
Brite
KEGG Orthology (KO) [BR:
lde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lde03400
]
LDBND_0895 (addB)
Enzymes [BR:
lde01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LDBND_0895 (addB)
DNA repair and recombination proteins [BR:
lde03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LDBND_0895 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Stn1_C
Motif
Other DBs
NCBI-ProteinID:
ADQ60938
LinkDB
All DBs
Position
918055..921594
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AA seq
1179 aa
AA seq
DB search
MIKIITGRQSDPLQTEIIGRAARNYLAQPGKDTFIIVPNHIKFNTEVAAIGKVAQLQGRE
ETSVKNLHVLSFSRLAWFFFKKADLLMPESLDDAAATMILEQIIDKRRDELLLFKNSHAN
SGMIKQVYSTILQVHTGQLDLGNLLERAADPAVALDLDNETRDKLHDLDLIYQDFLEIVS
EKHFATKDELNIQLNQLLASRPDLVSQASFYVTDFSHFSIQEKMTMQLLAAFASEMTFAF
KTADGSVIEPAAGEYDYVVQKTIKDLTGYFSAHDFAWEREKIASPVSPARDLNQAWQGQG
QPDLDNLQLVKADSRYAEAYFVARTIYDEVALKGCQYRDFLVLAPNLQEYETYLAPILRQ
NQIPFFDDLQQQMKYHPLVLLLENLGKLLQQAGDTPALLSIMKTRLLIPDWYLEGDAEAG
EAAYLRDVDQLENFALAHGIKYSLWQKPLKDFTKAQVIALDQEQYQKWLDRLDKLRDFFV
SKISRLARQLKSEKDSMTAVKLFFDFLVKNGVSARLEAWRLKASESGDLQQAQQPEQCWN
LLLSLLKDYLLVNPENFAWADFFKMLTAAFSQANFATIPASLDAVTLSEYGMVQTSGYKQ
VFIIGAANGSLPQINDQPNFLTTENLASLADFFDQEAYLEDSQQLRNLDQEYQFGNALAL
ASDRVYISYPVINSNNDLLDPSIYYKRLLKLVNGREYRQRDLPDTAEKDRTEFARQLLLF
LTSPRASLGYLAYAEENSAQSPLVAKLVELSRQYEEEKAEEITEGMAYDNNPQDISEDLA
ERLYGKDLLSSVSQLESYYQNSFEYFLNYGLRLRPRAENELNAIQSGNYFHRTFELLLKE
MQKKNIEIDKLSELDLELLLKQVRSKILQEPLYQQFLRDPFNEYLFKAFDKTTSKVAQSY
RRKQQENKMRATYGELAFGPAEKLAGLVLPLKKFAGQRKISLRGKIDRVDLFNGDQHVLG
QLIDYKSSDHSFNLARFASGVDLQMIAYLDVLEKNQDLLAGGRQFDLLGAFYQYVTRKLN
SINSSSTGALFDSKLQLKENLLGGEDKLKLSGVFISEPAWYQEVDKALEKKASSPVYRGL
KLNKSGGFGKKDNFFSQDEMQELLEYVEALIEDAASEILSGKIALNPFRQGNNTGLAFSD
YKDIFYFDQQLPTNSYRDLPSLKKADLLALVEKRLRQRR
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaattataaccggcagacagtccgatcccctgcaaactgagatcatcggccgg
gctgcccgcaattatctggcccagcccggcaaagatacctttattattgttccaaaccat
atcaagtttaacacagaagttgccgcaataggcaaagtcgcccaacttcaagggcgggaa
gagaccagcgtcaagaacctgcacgtcctgtccttctcccgtctggcctggtttttcttt
aaaaaggccgacctgctcatgcctgaaagcctggatgacgctgccgcgaccatgattttg
gagcagatcatcgacaagcgcagagatgaactgctgcttttcaaaaattcccacgccaat
tccggcatgattaagcaggtctacagcacgatcctgcaggttcataccggacagctggac
ctgggcaatcttttggagcgggcagccgacccggcggtggccttggacctggataatgag
accagggacaagctgcacgacctggacttgatctaccaggactttttagaaatcgtcagt
gaaaagcacttcgccaccaaggatgaactgaacatccagctgaaccagcttttggccagc
cggccggacctggtcagccaggccagcttctacgtgactgatttctcccatttttccatt
caggaaaaaatgaccatgcagctgctggcagcttttgccagcgagatgaccttcgccttc
aagacggctgacggcagcgtaattgagccggccgccggggaatacgactatgtggttcaa
aagacgatcaaggacttgaccggctacttttccgcccatgactttgcctgggagagagaa
aaaatcgccagtccagtcagtccggccagggacttgaaccaggcctggcagggacagggc
cagccggatttagataacctccagctggttaaagcagattcccgctacgctgaagcatat
ttcgtggcccggaccatctatgatgaggtggctttaaagggctgccagtaccgagacttt
ttggtcctggccccgaatttgcaggagtatgaaacttacctggctccgattttgcggcaa
aaccagattcccttctttgacgacctgcagcagcagatgaagtaccaccccttggtgctt
ttgctggaaaatttgggcaagctcctccagcaggcaggagacacgccagctcttttgagc
atcatgaagacccgcctcttgatccctgactggtatttagaaggggatgcagaagccggg
gaagccgcgtatttgcgcgacgtcgaccagctggaaaactttgccctggcccacggaatc
aagtacagcctttggcaaaagccactcaaggactttaccaaagcccaggtcatcgcccta
gaccaagaacagtaccaaaagtggctggaccgcttggacaagctgcgggacttctttgtc
agcaagatctcccggcttgcccgccagctgaagagtgaaaaagacagtatgaccgccgtc
aagctcttttttgacttcttggtcaaaaacggggtcagcgcccgcctggaagcctggcgc
ttaaaggccagcgagagcggagacctgcagcaggcccagcagccggagcagtgctggaat
ctgcttttgtctttgctcaaagactacctcttggtcaacccggaaaactttgcctgggct
gacttctttaagatgctgacggcagccttttcccaggccaatttcgcgacgattccggcc
agcctggacgccgtcaccttgtcagaatacgggatggtgcagaccagcggctacaagcag
gtcttcatcatcggagcagccaatggcagcctgccgcaaatcaacgaccagcccaacttt
ttgactacggaaaacctggccagcctggcagacttttttgaccaggaggcctacctggaa
gacagtcagcagctgcgcaacctggaccaggaataccaatttggcaatgccctggccctg
gcctctgaccgggtctacatctcctatccggtgatcaattccaataatgacttgctggat
ccttccatttactacaagcgcctgctgaagctggttaacggccgggaataccggcaaagg
gacctgccagataccgctgaaaaagaccggactgaatttgcccgccagcttttgctcttt
ttgaccagtccaagggccagcttaggctacctggcctatgctgaggaaaattccgcccaa
agcccgctggtggccaagctggtcgaactcagccggcagtatgaggaagaaaaggctgag
gaaatcacggaagggatggcctatgacaataacccgcaagacatctcagaagacctggct
gagcgcctgtacggcaaggacctgttgtcttcagtctcccagctggaaagctactaccag
aattcttttgaatacttccttaactatggcctccgcctgcggccccgggcagaaaatgag
ctgaatgccatccagtccggtaactacttccaccggacctttgagcttttgctcaaggaa
atgcaaaagaaaaatatcgaaattgacaagctcagcgagctggacttggagcttttgctc
aagcaagtcagaagcaagatcctgcaagaaccactctaccagcagttcttgcgtgatcct
ttcaatgaatatcttttcaaggcctttgacaagacgaccagtaaggtggcccaaagctac
cggcgcaagcagcaggaaaacaagatgcgggctacttacggggaactggcctttggcccg
gctgaaaagctggccggcctggtcttgcctttgaagaagtttgccggccagcggaagatc
agcctccggggcaaaatcgaccgggtcgacctctttaatggggaccagcacgttttaggc
cagctgatcgactacaagtcttccgaccacagcttcaacctggcccgttttgccagcggg
gtggacctgcagatgatcgcctatttggacgttctggagaagaaccaggacctcctggcc
ggcgggcggcagtttgacctcctgggggccttttaccaatatgtcacccggaagctgaat
tccatcaactcctcatcaactggcgccttgtttgacagcaagctgcagctgaaagagaac
cttttgggcggagaagacaagttgaaattgtccggggtctttatcagtgagccagcctgg
taccaggaagtcgacaaagcccttgagaaaaaggcaagcagtccggtttaccggggcctc
aaactgaacaagagcggcggctttggcaaaaaagacaacttcttcagccaagatgagatg
caggagctgctggaatacgtcgaagccttgattgaggacgcggccagcgagattttaagt
gggaagattgccttgaatcctttccggcaaggcaacaataccggcctggcatttagcgac
tacaaggatatcttctactttgaccagcagctaccaactaactcttaccgagacctgcca
agccttaaaaaggcagatctgctggctttggtagaaaagcggctgcggcagaggagataa
DBGET
integrated database retrieval system
