Lactobacillus delbrueckii subsp. bulgaricus ND02: LDBND_1273
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Entry
LDBND_1273 CDS
T01360
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lde
Lactobacillus delbrueckii subsp. bulgaricus ND02
Brite
KEGG Orthology (KO) [BR:
lde00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lde03016
]
LDBND_1273
Enzymes [BR:
lde01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LDBND_1273
Transfer RNA biogenesis [BR:
lde03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LDBND_1273
Prokaryotic type
LDBND_1273
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ADQ61308
LinkDB
All DBs
Position
complement(1309818..1310714)
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AA seq
298 aa
AA seq
DB search
MFNGIIVIDKAAGMTSGDVVYKLRRLLKQKKIGHAGTLDPEVTGVLPIALGQATKLIELM
HERPKAYVGEGMLGLATDSYDLEGKILAERALSQPVSDQAIKAAMEKFTGEIVQQPPIYS
AVRVNGKRLYEYAREGIPVERPKRTVQVFRYDLTAPSQFDPEKGRQTFTYEVECSKGTYV
RSLVNDLGEELGLPAVMTKLRRTASSGYKLQDAVTLEELADNLNHAEDYIQPIDSFFADY
QQVDLDAALWQQVKNGAWIKLPLDADKVALRYNKTVKAIYRAKGQGLYCPDLMLLSNE
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatggaattatcgtaatcgacaaggcagcagggatgactagcggggatgtggtt
tataagctgcgccgactcttaaagcaaaaaaagatcggccatgccggaaccctggacccg
gaagtcaccggagttttgccaattgctttgggtcaggcaaccaaactgatcgagctgatg
catgagcggccaaaggcttatgttggtgaagggatgctgggcctggccacggactcttat
gacctggaggggaagattttggcggaaagagccttgtctcagccagtcagtgaccaggcc
atcaaagcagcaatggaaaagtttaccggggaaatcgtccagcagccgccgatttattct
gccgtcagggtaaatggcaagcggctctacgaatacgccagagaagggatcccagttgag
cggcccaagcggactgtccaggttttccgctacgacttgacggcgccaagtcagttcgac
ccagagaagggccggcagacttttacttatgaagttgaatgctctaaggggacctatgtc
cgcagcctggttaacgacttaggcgaagaactgggcctgccggcagtgatgaccaaactg
cggcggacggccagttctggttacaagctccaagacgcggttactttggaagaactggcg
gataatttgaaccacgctgaagattatattcagccaatcgacagctttttcgctgactac
cagcaagttgatttagatgccgccttatggcagcaggttaaaaacggggcctggatcaaa
ctccctcttgatgcagacaaggtcgctttgcggtataataaaacagttaaagcgatttac
cgggccaagggacaaggtctctactgcccggacttaatgcttttaagtaatgagtaa
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