Leptosomus discolor (cuckoo roller): 104340100
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Entry
104340100 CDS
T08399
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
ldi
Leptosomus discolor (cuckoo roller)
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ldi03041
]
104340100 (DDX1)
03016 Transfer RNA biogenesis [BR:
ldi03016
]
104340100 (DDX1)
Enzymes [BR:
ldi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104340100 (DDX1)
Spliceosome [BR:
ldi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104340100 (DDX1)
Transfer RNA biogenesis [BR:
ldi03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
104340100 (DDX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
SPRY
ResIII
CMS1
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
104340100
NCBI-ProteinID:
XP_009945497
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPVIQIVYE
TLKDQMEGKKGKATIKTGGAVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWHGCRATR
GVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFDSYGEEF
TMHDTIGCYLDIDKGQIKFSKNGKDLGLAFEIPPHIRNQALFAACVLKNAELKFNFGEED
FKFPPKDGYIGLCKAPDGSVVKSQHSGNAQVVQTQNLPNAPKALIVEPSRELAEQTLNNV
KQFKKYVDNPKLRELLIIGGVAARDQLSILEQGVDIVVGTPGRLDDLVSTGKLNLSQVRF
LVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSEKIMHFP
TWVDLKGEDSVPETVHHVVVPVNPKADKLWERLGKNHIR
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtcatgcctgagatagctcaagcggtggaggagatggactggctccttcctacg
gatatccaagcagaatccatcccactgatcctgggaggtggtgatgtacttatggctgct
gaaacggggagtggaaaaactggggcttttagcattccagttatccagattgtttatgaa
acgctgaaggaccagatggaaggcaagaaagggaaagcaactattaaaaccgggggggca
gtgctcaataaatggcaaatgaacccgtatgatagaggatcagcttttgcaattggatca
gacggtttgtgttgtcaaagcagagaagtaaaagaatggcatggatgcagagcaactaga
ggtgtgactaaagggaaatactactacgaagtttcctgtcatgaccaaggcttgtgcaga
gttggttggtcaactatgcaggcttcactggatttgggtactgataaatttggctttggc
tttggtggtactggtaagaaatctcacaacaagcaatttgacagctatggtgaggaattc
actatgcatgatacaattgggtgttacctagacatagataaaggacaaataaaattttcc
aaaaatgggaaggaccttggcctggcgtttgaaatcccaccgcacataaggaaccaagca
ctgtttgcagcttgtgtactgaagaatgctgaattgaaattcaattttggtgaagaagat
ttcaagtttccaccaaaagatggctatattggtctttgcaaggctcccgatggtagtgtt
gtaaaatcacagcactcgggaaatgcccaagtggttcaaacacagaaccttccaaatgct
ccaaaagcattgattgtagaaccatcaagggagctggcagaacaaaccttgaacaatgta
aagcagttcaaaaaatatgtcgataatcccaaattaagggagctgttgattattggtggt
gttgctgcaagagatcaactctctatactggaacaaggagtggatattgtcgttggaact
cctggaagactggatgacctggtctcgacgggaaagcttaatttatctcaagttagattc
ctggttctggatgaagctgatggccttctcctccaaggttattcagatttcataaacagg
atccacagtcaaattcctcagataacttcagatggaaagagacttcaggtgattgtgtgc
tctgcaacactacattcttttgatgtgaaaaaactatctgaaaagatcatgcattttcct
acctgggttgatttgaaaggagaagattctgtccctgaaactgtacaccatgtagttgtg
cctgtaaacccaaaagctgacaaactctgggaaaggcttggcaagaatcatatcaga
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