Leptosomus discolor (cuckoo roller): 104340277
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Entry
104340277 CDS
T08399
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
ldi
Leptosomus discolor (cuckoo roller)
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ldi03021
]
104340277 (CHD1)
03036 Chromosome and associated proteins [BR:
ldi03036
]
104340277 (CHD1)
Transcription machinery [BR:
ldi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
104340277 (CHD1)
Chromosome and associated proteins [BR:
ldi03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
104340277 (CHD1)
SLIK complex
104340277 (CHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Motif
Other DBs
NCBI-GeneID:
104340277
NCBI-ProteinID:
XP_009955947
LinkDB
All DBs
Position
Unknown
AA seq
1060 aa
AA seq
DB search
MMELKKCCNHCYLIKPPDDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFS
QMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGI
NLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMV
LDHLVIQRMDTTGKTVLHTGSTPSSSTPFNKEELSAILKFGAEELFKEPEGEEQEPQEMD
IDEILKRAETRENEPGPLTVGDELLSQFKVANFSNMDEDDIELEPEKNSRNWEEIIPEVQ
RRRIEEEERQKELEEIYMLPRMRNCAKQISFNGSEGRRSRSRRYSGSDSDSISERKRPKK
RGRPRTIPRENIKGFSDAEIRRFIKSYKKFGGPLERLDAVARDAELVDKSETDLRRLGEL
VHNGCIKALKDNSSGQERAGGRLGKVKGPTFRISGVQVNAKLVISHEEELAPLHKSIPSD
PEERKRYVIPCHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLTQKILPD
DPDKKPQAKQLQTRADYLIKLLNKDLARKEAQRLAGGGNSKRRKTRTKKNKVIKAVKIKE
EVKSDSSPQPSEKSDEDDDEDNKDEIVSVKHPHKKIKAEKENEEKPEPDIGIKKEAEEKR
ETKEKENKRDLKREKKEKEDKKELKEKDIKEKRENKVKESTQKEKEVKEEKVNEIKSENK
EKTKRIPLLDTPVHITATSEPVPISEESEELDQKTFSVCKERMRPVKAALKQLDRPEKGL
SEREQLEHTRQCLIKIGDHITECLKEYTNPEQIKQWRKNLWIFVSKFTEFDARKLHKLYK
HAIKKRQESQQHNDQNTSSSVNTHVTRNPDVERLKENTNHDDSSRDSYSSDRHLSQYHDH
PKDRHQGDAYKKSDSRKRPYSAFSNGKDHRDWDHYKQDSRYYSDSKHRKLDDYRSRDHRS
NPEGSLKDSRAHSDHRSHSDHRIHSDHRSTSEYSHHKSSRDYRYLSDWQMDHRASGSGPR
SPLDQRSPYGSRSPLGHRSPFEHSSDHKSTPEHTWSSRKT
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atgatggaactcaagaagtgttgtaaccattgctacctcattaaaccaccagatgataat
gaattctataataaacaggaggccttacagcatttaatacgtagcagtggaaaactaatc
cttcttgacaagctactgatccgtctgcgagaacgtggcaacagagttctgattttctca
cagatggtgaggatgctggacatcctggcagaatatctgaagtatcgtcagtttcccttt
cagagactggatggatcaataaaaggggaattaaggaaacaagcactggatcattttaat
gcagaaggatcagaggacttctgctttttactgtctaccagagctggtgggttaggtatc
aacttggcatctgctgacactgtagttatatttgattctgactggaatccacagaacgat
ctacaagcacaggctagagcgcataggattggacagaagaaacaggttaatatttatcgg
ctagtcacaaaaggatcagtagaagaagatattcttgaaagagccaagaaaaagatggtg
ttagatcatttagtaattcagagaatggacactacagggaaaaccgtgctgcatacaggc
tctactccttcaagctcaacaccttttaataaggaggagttatcagcgattttgaagttt
ggtgctgaggaactttttaaagagcctgaaggggaagaacaggagccccaggaaatggat
atagatgaaatcttgaagagggctgaaactcgagaaaatgagccaggtcccttaactgta
ggagatgagttgctttcgcagttcaaggtggccaacttttccaatatggatgaagatgat
attgagttggaaccagaaaaaaattcaagaaattgggaagaaatcattccggaagtccag
cgtcgaagaatagaagaagaggaaagacagaaagaacttgaagaaatatacatgctccca
aggatgagaaactgtgcaaaacagatcagctttaatggaagtgaagggaggcgcagtagg
agcagaagatactctgggtctgatagtgactccatctcagaaagaaaacggccaaaaaaa
cgtggaagaccacgaactattcctcgagaaaatattaaaggatttagtgatgcagagatc
aggcggtttatcaagagttacaagaaatttggtggccctcttgaaaggttggatgctgta
gctagagatgctgagctagttgataaatcagagacagatcttagacgtttgggagaactt
gtacataatggatgcattaaagctttaaaggacaattcatctggacaagaaagagcagga
ggtagacttgggaaagttaaaggcccaacattccgaatctcaggagtgcaggtgaatgca
aagctagtcatctcccatgaagaagagttggcaccattgcacaaatctattccttcagat
ccagaagagagaaaaagatatgtcatcccgtgccacaccaaggctgctcattttgatata
gattggggtaaggaagatgattccaatctattaataggcatatatgaatatggttatggc
agctgggaaatgataaaaatggatcctgatctcagtttgacacagaagattttacctgat
gatccagataagaaaccccaggcgaagcagctacagacccgtgcagactacctcattaaa
ttactgaataaagaccttgcaagaaaggaagcacaaaggcttgctggtggaggcaattca
aagaggaggaaaacaagaactaagaagaataaggtgataaaggctgtaaaaataaaagaa
gaagtaaaaagtgattcttcaccacagccctcggaaaaatctgatgaagatgatgatgag
gataacaaggatgagattgtttcagtgaaacatccacataaaaaaattaaagcagaaaaa
gaaaatgaagaaaagcctgagccagatattggtataaagaaggaagctgaagaaaaaaga
gagacaaaagaaaaggaaaataagagggatttgaaaagggagaaaaaagaaaaagaggat
aagaaagaattaaaagaaaaagatattaaagaaaagagagaaaacaaagtaaaagaatcc
acacagaaagaaaaagaagtaaaggaagagaaggtaaatgaaatcaagtctgaaaataaa
gaaaaaactaaaagaattccattgttggatactccagttcatattactgcaactagtgaa
ccagttcctatatcagaagaatctgaagaactggatcagaagactttcagtgtgtgcaaa
gaaagaatgaggcctgttaaagcagcattgaaacagcttgatcgaccagagaaaggcctt
tctgaaagagagcagctggaacatactaggcagtgtctaatcaaaattggggatcacatt
actgaatgtctaaaggagtacacaaatcctgaacaaattaaacagtggagaaaaaatttg
tggatttttgtctctaagtttacagaatttgatgccagaaagctgcacaaactgtataaa
catgcaatcaaaaaacgccaagagtctcagcaacacaatgaccagaatactagcagcagt
gtgaatacacatgtaactagaaatccagatgtggaaagactgaaggagaatacaaaccat
gatgacagtagcagggacagttactcttctgatagacatttgtcacaataccacgatcat
cctaaagacaggcatcagggagatgcttacaagaaaagtgactctaggaaaaggccctat
tcagccttcagcaatggaaaagatcacagagactgggatcactacaaacaggacagtaga
tactacagtgatagtaaacacagaaagttagatgactacaggagcagagaccacaggtca
aacccggaaggaagtttaaaagacagccgagctcattcagatcaccgttcccattccgac
cacaggatacattcagatcaccgttccacttcagagtacagccatcataaatcttctaga
gattatagatacctctcagactggcaaatggaccacagagcttcgggtagtggcccaagg
tcaccattagatcagaggtctccttatggttcaagatctcccctaggacacagatctcca
tttgaacactcatcagatcacaaaagtacacctgaacatacatggagtagccggaaaaca
taa
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