Leptosomus discolor (cuckoo roller): 104340363
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Entry
104340363 CDS
T08399
Symbol
DROSHA
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
ldi
Leptosomus discolor (cuckoo roller)
Pathway
ldi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104340363 (DROSHA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ldi03019
]
104340363 (DROSHA)
03009 Ribosome biogenesis [BR:
ldi03009
]
104340363 (DROSHA)
03036 Chromosome and associated proteins [BR:
ldi03036
]
104340363 (DROSHA)
Enzymes [BR:
ldi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
104340363 (DROSHA)
Messenger RNA biogenesis [BR:
ldi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
104340363 (DROSHA)
Ribosome biogenesis [BR:
ldi03009
]
Eukaryotic type
90S particles
RNase
104340363 (DROSHA)
Prokaryotic type
rRNA processing factors
104340363 (DROSHA)
Chromosome and associated proteins [BR:
ldi03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
104340363 (DROSHA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
RM44_endonuclase
5_3_exonuc
Motif
Other DBs
NCBI-GeneID:
104340363
NCBI-ProteinID:
XP_009960131
LinkDB
All DBs
Position
Unknown
AA seq
1017 aa
AA seq
DB search
MSFHSGRGCPRAQGGPGARTSTQTYRPQNLRQLHPQQSSVQYQYDQQTAPSTTYSNPPTT
GYMPPRPDFVPYPPPVPPSTQNPVSQCPMRPPFPNHQMRQSFPVPPCFPPAPPPVPNPSN
TPVPGNPAGQSTFPYMMPPPAVPHPPPPPVIPQQVGYQPVYSTGYSQPSFPPPNFNSYQH
SSGSFQSTTTNSSSSSSHFRHTGQYQGEKSQSDRRSPDRSKHYDEHRHREHGHIHGDRHR
STNHGDRRDRGRSPDRRRQESSRHRTDYDRGRISPHHRSYERNRERERERHRHRDSRRSP
SLDRSYKKDYKRAGSRSPSRERKRPRWEEDRERWSENQSSSKEKNYTTIKDKESEENASE
KNEEEDEELLKPVWVRCTHSESYYSNDPMDQVGDSTVVGTSKLRDLYEKFDEELGKRQAK
AKAARPPWEPPKTKLDEDLETSSDSDCDSEDDSSCSSSSDSDVFDVIAEIKRKKAHPDRL
HEELWYNDPGQMNDGPLCKCSAKARRTGIRHGIYPGEEPIKPCRPMTNNAGRLYHYRITV
SPPTNFLTDRPTVIEYDDHEYIFEGFSMFAHAPLTNIPLCKVIRFNIDYTIHFIEEMMPE
NFCVRGLELFSSYLFKDILELYDWNLKGPSLENDSICCPRFHFMPRFVRFLPDGGKEVLS
MHQILLYLLRCNKALVPEEEIANMLQWEELEWQKYAEECKGMIVTSPGMKPSSVRIDQLD
REQFNPDVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLRHLLANSPKVKQADKQKL
SQREEALQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAMMLPVLTHHVRYHQCLMH
LDKLIGYTFRDRCLLQLAMTHPSHHLNFGMNPDHARNSLSNCGIRQPKYGDRKVHHMHMR
KKGINTLINIMSRLGQDDPAPSRINHNERLEFLGDAVVEFLTSVHLYYLFPTLEEGGLAT
YRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMANCFEALIGKACVFV
NT seq
3050 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccattcggggcgaggatgtccccgtgctcaggggggaccaggagcaagaact
tcaacacagacctaccgccctcagaatctacggcagcttcacccacagcagtcctctgta
caataccagtatgaccagcaaactgccccttcaacaacctattcaaaccctccaactact
ggttacatgcctcccaggccagactttgtgccctatcctcctccagtgcctccctccacg
caaaatcccgtcagccagtgtcccatgaggccaccatttccaaaccaccagatgaggcag
agcttcccagtgcctccatgcttccctcctgctcctccgccagtgccaaaccctagcaac
actcccgtgcctggaaatcctgctgggcaaagcacctttccttacatgatgcctcctccc
gcagtaccgcatcctcctccaccaccagtcataccacagcaagtcggttaccagcctgtg
tactccacagggtattcacagccatcgttcccaccacctaacttcaatagctatcagcac
agctctggttcctttcagagcaccaccaccaacagcagtagcagcagcagccattttcgg
cacacgggtcagtaccagggagagaagtcgcaaagtgatcgacggtctccagacaggagc
aagcactacgatgagcatcgacatcgtgaacatggtcacatccatggggacaggcatcgg
tccactaaccatggggatcgtcgggatcgaggccggagtccagataggaggaggcaggaa
agcagtcggcaccggacagattatgacagaggaaggatctcgccccatcacagaagttac
gagcgtaacagggaacgggagagggagaggcatagacaccgtgacagcaggagatcacca
tcactagacagatcatacaaaaaagattacaagagagcaggaagccggtctccaagcaga
gagagaaagagaccccgatgggaggaggacagagaaaggtggtctgagaaccagagctcc
agcaaagagaaaaattataccactatcaaagacaaagaatcagaggagaatgcatctgaa
aaaaatgaagaggaagatgaggaattacttaagccagtctgggttcgctgtacccattct
gaaagctactattccaatgaccctatggatcaagtgggggactctactgtggtaggaaca
agcaagctcagagatctgtatgaaaagtttgatgaggagttaggaaagcgacaggcaaag
gccaaagcagccaggccaccatgggagccaccaaagaccaagctggatgaagatttagag
acctccagtgactcagactgtgactctgaagatgacagcagctgctctagcagttcagat
tcggatgtttttgacgtcattgcagaaatcaagcgtaaaaaagcacaccctgatcgtctc
catgaagaactgtggtacaatgatccgggacagatgaatgatggacctttgtgcaagtgc
agtgctaaagcccgacgaacaggaataagacatggcatttatcctggcgaagagcccatt
aaaccatgtcgccccatgaccaacaatgctggaagactataccactatcgaattactgtg
tcgcctcccacaaacttcttaacagaccgacctactgttattgagtatgatgaccatgaa
tatatctttgaagggttctcaatgtttgcacatgccccattaacaaacattcctctatgt
aaagtaatcagatttaacattgactatacaattcatttcattgaggagatgatgcctgag
aatttttgtgtgagaggtcttgagctcttctcttcatatctattcaaagatattttggag
ctttatgactggaatcttaaaggtccttcacttgaaaatgattctatttgctgccccagg
tttcacttcatgccgcgatttgtgaggtttcttccagatggaggaaaagaagtactctca
atgcatcagattcttctctacttgttacgatgcaataaagctctggtgcctgaagaggag
attgccaacatgcttcagtgggaagaactggaatggcagaaatatgcagaagaatgcaaa
gggatgattgttaccagccccggcatgaaacccagctcagttcgtattgatcaactggac
cgcgaacagttcaatcctgatgtaattactttccccattatcgtccactttgggatacga
cctgctcaactcagttatgctggagatcctcagtaccaaaagctgtggaagagttatgtg
aagttgcgtcacctcctggctaatagtcccaaagtcaaacaggctgataaacagaaatta
tcacaaagagaggaagctctgcagaaaattcgtcagaagaacacgatgagacgtgaagtg
actgttgagttgagcagccagggattctggaaaacagggatacgctctgacgtctgccag
cacgcaatgatgcttcctgtcctcactcaccatgtccgctaccatcagtgtctgatgcat
ttggacaaattgataggctacacttttcgagataggtgcttgctgcagcttgccatgact
catccaagccatcatttaaattttggaatgaatccggatcatgccagaaattccttatcc
aactgtgggattcgacagccaaagtatggagatagaaaagttcaccatatgcacatgagg
aaaaaaggaataaacaccctgataaatattatgtcccgtttgggacaggatgatccagct
ccttccaggattaaccacaacgagcgtttagaatttctgggagatgctgtggtggagttc
ttgacaagtgtccacttgtactacctgtttcccactctggaggaaggaggtttagctacg
taccgcactgccatcgttcagaaccagcacctggccatgttggctaagaagctggaacta
gatcgatttatgctttatgctcatggtccagacctttgcagggaatcagatctccgccat
gccatggccaactgcttcgaagccctaataggtaaagcatgtgtatttgt
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integrated database retrieval system
