Leptosomus discolor (cuckoo roller): 104340365
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Entry
104340365 CDS
T08399
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ldi
Leptosomus discolor (cuckoo roller)
Pathway
ldi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104340365 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ldi03041
]
104340365 (DDX5)
03009 Ribosome biogenesis [BR:
ldi03009
]
104340365 (DDX5)
Enzymes [BR:
ldi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104340365 (DDX5)
Spliceosome [BR:
ldi03041
]
Complex A
U1 snRNP components
U1 related factors
104340365 (DDX5)
Complex B
104340365 (DDX5)
Ribosome biogenesis [BR:
ldi03009
]
Eukaryotic type
Pre-60S particles
Helicases
104340365 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
104340365
NCBI-ProteinID:
XP_009959611
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
FGAPRFGGSRGGPLSGKKFGNPGEKLTKKKWNLDELPKFEKNFYQEHPDVVRRTVQEVEQ
YRSSKEVTVRGHNCPKPIINFYEANFPANVMEVIQRQNFTEPTAIQAQGWPVALSGLDMV
GVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYSRACR
LKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLEAGKTNLRRCTYLVLDEADRMLD
MGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANHNILQ
IVDVCHDVEKDDKLIRLMEEIMSEKENKTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDK
SQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPNSSEDYIHRIGRTARS
TKTGTAYTFFTPNNIKQVNDLISVLREANQAINPKLLQLIEDRGSGRSRGDRRDRYSAGK
RGGFSSFRERENFERNYGALGKRDFGAKTQNGAYSAQSFSNGTPFGNGFAAAGMQAGFRA
GNPAGAYQNGYEQQYGSNIANMHNGMNQQQYAYPATGAAPMIGYPMPTSYSQ
NT seq
1780 nt
NT seq
+upstream
nt +downstream
nt
gtttggagccccccgcttcggaggaagtagaggtggacctctctctgggaagaaatttgg
aaaccctggggaaaaacttacaaaaaagaaatggaatttagatgagctgccgaaatttga
gaagaacttctatcaagaacatcctgatgtagttagacgtactgtgcaagaagttgaaca
gtacagatcaagcaaagaagtcacagttaggggccataactgtccaaaaccaattataaa
cttctatgaagctaactttcctgcaaatgttatggaagtaattcagaggcagaacttcac
tgaaccaactgctattcaagcacaaggttggcctgttgcattgagtggattggacatggt
tggagtggcacagactggatcagggaaaacgctgtcttacttgttgcctgctattgtgca
tataaatcatcagccattcctggagcgaggagatggacccatttgtcttgtgctggcacc
aactcgtgaactggctcaacaagtgcagcaggtagctgctgaatacagcagagcgtgccg
tttgaagtctacgtgtatttatggaggtgctccgaagggaccacagattcgtgacttaga
aagaggtgtggaaatctgcattgcaacacctggaagacttattgacttcttagaagctgg
aaaaaccaatctcaggaggtgtacttacctcgtcctcgatgaggctgacaggatgcttga
catgggatttgaacctcagatcagaaaaattgtggatcagataagacctgacaggcaaac
tctgatgtggagtgccacatggcctaaggaagtaaggcagctggctgaagacttcttgaa
agaatatgtacacatcaacatcggtgcattagaactaagtgcaaaccacaacattcttca
gattgtggatgtgtgtcatgatgtagagaaagatgacaagcttattcgtttgatggaaga
aataatgagtgagaaggaaaataaaacaattgtttttgtggaaaccaaaagacggtgtga
tgatcttaccagaaaaatgaggagagatgggtggccagcgatgggtattcatggtgataa
aagtcagcaggagagggactgggtcctaaatgagttcaaacatggaaaagcaccaatcct
gattgctacagatgttgcatccagaggtctagatgtggaagatgtgaaatttgtcatcaa
ttatgactaccctaactcctcagaggactatatccaccgaattggacgaactgcccgcag
taccaaaacaggcacagcatacacattctttactcctaacaatattaagcaagtaaatga
cctcatctctgtgcttcgggaggctaatcaagccatcaaccccaaattgcttcagttgat
tgaagacagaggttcaggtcgttcccgaggtgatcgacgtgacagatattctgcgggcaa
aaggggtggatttagtagttttagagagagggagaactttgagagaaactatggtgcgct
aggcaagagagacttcggagcaaaaactcaaaacggggcctacagtgcccaaagtttcag
taatggaactccttttgggaatggctttgcagctgcaggcatgcaggctggcttcagggc
tggtaaccctgccggagcttaccagaacggctatgagcagcagtatgggagtaacattgc
aaatatgcacaatggcatgaaccagcagcagtatgcgtatcctgccactggtgctgctcc
tatgataggttacccgatgccgacaagttattctcaataa
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integrated database retrieval system
