Leptosomus discolor (cuckoo roller): 104340386
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Entry
104340386 CDS
T08399
Symbol
DDX27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
ldi
Leptosomus discolor (cuckoo roller)
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ldi03041
]
104340386 (DDX27)
03009 Ribosome biogenesis [BR:
ldi03009
]
104340386 (DDX27)
Enzymes [BR:
ldi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104340386 (DDX27)
Spliceosome [BR:
ldi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104340386 (DDX27)
Ribosome biogenesis [BR:
ldi03009
]
Eukaryotic type
Pre-60S particles
Helicases
104340386 (DDX27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
PRK
AAA_22
FerA
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
104340386
NCBI-ProteinID:
XP_009954411
LinkDB
All DBs
Position
Unknown
AA seq
757 aa
AA seq
DB search
MLQGLGLVGTIAEGDVGPEDPESGGSEDDEELCQALGPRRRGPTGGDFSSAFVFGEVEAG
GEGAWAAALQQLRGKRAATTLDEKIEKVRQKRKIQEREAKQAKVRGEDMETEDNQTKKRD
CEDFGRDEEEDVESQCSLDDETIFTKADTVKVKERRRSKKGEMETESFFEDASQYDDHLS
FQDMNLSRPLLKAITVLGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFILPVLER
LIYKPRQAPITRVLVLVPTRELGIQVHSVTKQLAQFSSVTTCLAVGGLDVKTQEAALRSG
PDILIATPGRLIDHLHNCPSFHLSSVEVLILDEADRMLDEYFEEQMKEIIRLCSNHRQTM
LFSATMTEEVKDLASVSLKNPMRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVSALLT
RTFPDHVMLFTQTKKQAHRMHILLGLMGLRVGELHGNLSQAQRLEALRRFKDEQIDILVA
TDVAARGLDIEGVKTVINFTMPNTTKHYVHRVGRTARAGRAGRSVSLVGEEERKMLKDIV
KTAKTAVKARILPQDVILKFREKIESLEKDVYAVLCLEREEREMQQSEAQINRAKKQLET
GKQETVGERLERSWFQTREERKKEKLAKALQEFDLALRGKKKRKKFMQERQKKVQMTPEE
RSQFEILKSQMYAERLAKRSRRAKRARVLPEEEPAAVPAGPKRKKKLSVFDEELTNTSRK
ALKQYRAGPSFEDRKRLGMAQHRKGGNFKSKSRYKRK
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagggcttgggcctggtgggcacgatcgcagagggggacgtggggcccgaggac
ccggagtctgggggctctgaggacgatgaggagctgtgccaggcgctgggccccagacgg
cggggccccacgggcggcgacttcagttccgccttcgtcttcggcgaggtggaggccggc
ggagaaggcgcctgggcggcagcattgcaacagctccgcggcaagagagcagctacgacg
ctggatgagaagattgagaaagtgagacagaaaagaaagatccaggaaagagaagctaaa
caagcaaaggtgagaggtgaagatatggagactgaggataatcaaaccaaaaagagggac
tgtgaggattttggaagggatgaagaggaagatgtggagtctcagtgttcattggatgat
gaaactatcttcacaaaagcagatacagtcaaagtgaaggaacggaggagatcaaaaaag
ggagaaatggaaacagagagcttttttgaagatgcctcccaatatgatgatcacttgtca
ttccaagacatgaatctctcacgacctttgctaaaggcaatcacagttcttggcttcaag
caaccaaccccaattcagaaggcttgtatcccagtaggtcttctggggaaggatatttgt
gcttgtgctgccactgggacaggtaaaacagctgccttcatcttgcctgtccttgaacgc
ctgatttacaaacctcgtcaggctccaataacacgggtattggttctagtgccaacacga
gaactgggtattcaggtgcactctgtcacaaaacagctggcacagttcagcagcgtcaca
acttgccttgctgtaggtggcctagatgtgaagactcaggaagcagctctgcgctctggg
ccagacattcttattgccactcctgggcgactgatcgatcatctccacaactgcccttct
ttccacctgagcagtgttgaggtgctgattttggatgaagcagacaggatgctggatgaa
tactttgaggaacagatgaaagaaataatcagattgtgctccaaccaccgtcagacaatg
cttttctctgccacaatgacagaagaggtgaaagatttagcttctgtttccctgaaaaat
cccatgcgaatttttgtgaacagcaacacagatgttgcccctttcctgcgtcaggaattt
atccggatcagacccaaccgagagggggaccgtgaggccattgtatcagctctactgaca
cgaaccttcccagatcacgtgatgcttttcactcagactaagaagcaagctcaccgtatg
cacatcctacttgggctgatgggtctgcgtgttggggagcttcatgggaacctctctcag
gcacagcgactggaagcactcaggcgctttaaggatgagcagattgatattctggtagct
acggatgtggctgcacggggacttgatattgaaggtgttaaaacagtaatcaattttacc
atgcccaacaccactaaacactatgttcatcgagtgggtcggacagcaagagcaggcagg
gctggtcgttcagtttcacttgtgggtgaggaagagcgcaagatgctgaaggatattgtg
aagactgccaaaacagcagtgaaagccagaattctcccccaagatgtcatactaaaattt
cgagagaagattgagagtctagagaaggatgtgtatgcagttctgtgcttggagcgtgag
gaacgtgagatgcagcaatcagaggcccagatcaatagggcaaagaagcaactggagaca
ggaaaacaggagactgtgggtgagcggttggagcggagctggttccagacccgtgaggag
aggaagaaagagaaattggctaaagccctgcaggagtttgacctagcattgcgaggcaaa
aagaaaaggaagaaatttatgcaggagagacagaaaaaagtccaaatgacgccagaggag
cggtcacagtttgaaatcttgaaatctcaaatgtatgctgagcggctggcaaaaaggagt
cgccgagcaaagcgagccagagtcttgccagaagaggaaccagcagcagtaccagcaggc
cccaagcggaagaaaaaactgtccgtgtttgatgaagagcttaccaacacaagcaggaag
gctctgaagcagtaccgtgccggcccatcgtttgaagatcgaaaacgcttgggtatggcc
cagcataggaaaggaggaaacttcaaatccaagtccaggtacaagagaaagtaa
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integrated database retrieval system
