Leptosomus discolor (cuckoo roller): 104340402
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Entry
104340402 CDS
T08399
Symbol
DDX46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ldi
Leptosomus discolor (cuckoo roller)
Pathway
ldi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104340402 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ldi03041
]
104340402 (DDX46)
Enzymes [BR:
ldi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104340402 (DDX46)
Spliceosome [BR:
ldi03041
]
Complex A
U2 snRNP components
U2 related factors
104340402 (DDX46)
Complex B
104340402 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
104340402
NCBI-ProteinID:
XP_009955211
LinkDB
All DBs
Position
Unknown
AA seq
1037 aa
AA seq
DB search
HYRKRSASRGRSGSRSRSRSPSDKRGKRGEDRRSRSRDRERRRERSRSRDKRRSRSRDRK
RQRRSRSRERERSRERRRSRSRERRRSRSRSRGRRSRSSSPSKNRKTENRSRSKEKTEGV
EVSKEKKKDDKEEEKDKDATTNTVATENFDQNKLEEEMRKRKERVEKWREEQRKKAMENI
GELKKEIEEMKQGKKWSLEDDDDDEEETAEGEKEGNEVEDEELDPLDAYMEEVKEEVKKF
NMRSVKGGGGSEKKSGPTVTKVVTVVTTKKAAVESEKKKGELMENDQDAMEYSSEEEEVD
LQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTQEEVNVYRLELEGITV
KGKGCPKPIKTWVQCGISMKILTALKKHGYEKPTPIQTQAIPAIMNGRDLIGIAKTGSGK
TIAFLLPMFRHIMDQRALEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGG
TGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGFEPQ
VMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQHVIVIEE
ENKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCLSLHGGIDQYDRDSII
NDFKNGICKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTF
ITEDQARYAGDIIKALELSGNPIPTDLEKLWADFKDQQKAEGKLIKKSSGFSGKGFKFDE
TEQALANERKKLQKAALGLQDSDDEDTAVDIDEQIESMFNSKKRVKDMAAPGTSNAPTPS
AGNAEKLEIAKRLALRINAQKNLGAEAQVLVPFHFKDVMQQATNAILRGGTIQAPTVSAK
TIAEQLAEKINAKLNYVPIEKQEEEKQDGGQNESFKRYEEELEINDFPQTARWKVTSKEA
LQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELI
RLQNSYQPTNKGRYKVL
NT seq
3115 nt
NT seq
+upstream
nt +downstream
nt
gcattaccggaagcgctccgcatctcgcggacgctctggcagccgttcgcgaagtcgttc
tccctctgacaaaagagggaagcggggagaagacagacgctcgaggagcagagatcgaga
acgtcgacgcgagaggtcgcgcagcagggacaagaggaggtctcgatcgcgtgacagaaa
gcgccaaaggcgttcaaggagtagagaaagggaacggagccgagagagaagaagatcccg
gagccgagagaggaggcgctctagaagcagaagcagaggcaggcggtctcgatcctccag
tccaagcaagaacaggaaaacagaaaacagatcaagatctaaagaaaagacagaaggtgt
ggaagtttccaaagaaaagaaaaaagatgacaaagaagaagagaaggataaagatgctac
cacgaatactgtggccactgagaattttgatcagaacaaactagaagaagaaatgagaaa
acgaaaagaaagagtggagaaatggagggaagaacaacgcaagaaggctatggaaaacat
aggagaactgaaaaaagaaattgaagagatgaaacaggggaaaaaatggagtttagaaga
tgatgatgatgatgaagaggaaactgcagaaggagaaaaagaaggcaatgaggttgaaga
tgaagagttagatcctttggatgcttatatggaagaagtaaaagaagaggtcaagaagtt
caatatgagaagtgtgaaaggtggaggtgggagtgagaagaaatctggaccaactgttac
caaagtagtaaccgtggtgacaaccaaaaaggcagctgtagagtcagaaaagaagaaagg
ggagctcatggagaatgaccaagatgcaatggagtattcctcagaagaggaggaagttga
tcttcagactgccctgactggctatcagaccaagcagagaaagctgctagaaccagtgga
tcatggaaagatagaatatgaacctttcaggaaaaacttctatgttgaagtaccagaact
agctaaaatgactcaagaagaggtgaatgtgtacaggctggagttggagggaattacagt
caagggaaaaggctgccccaaaccaataaaaacctgggtacagtgtggtatttccatgaa
gattctcactgccctcaaaaaacatggctatgaaaagcccactcccattcaaacccaggc
tatcccagcaatcatgaatggacgtgacctgattggcattgctaagacaggaagcggaaa
aactatcgcgtttctgttgcccatgttcaggcacattatggatcagagagcgttagaaga
aggagaaggtcccatagctgtcattatgacacctactcgcgagttggctttgcagattac
caaggagtgtaagaaattctcaaagacacttgggcttcgagttgtctgtgtttatggagg
cacaggaatcagcgaacagatagctgaactcaaaagaggtgctgaaattattgtttgcac
acctggacgtatgattgacatgttagcagctaacaatggtcgggtgacaaacctccgcag
agtcacatatgttgtactggatgaagcagacagaatgtttgacatgggttttgaacctca
ggttatgcgcattgtagacaacgtcaggcctgaccgtcagactgtcatgttctctgctac
tttccccagagctatggaggctttagctcggagaatcctcagtaaacctatagaagtgca
ggtcggaggcaggagtgttgtctgttctgatgtggagcaacatgttattgtcatagaaga
ggagaacaagtttttgaagttactggagctactgggacactatcaggagaaaggatcagt
tatcatatttgtagataaacaagagcacgctgatgggttgctgaaggatctaatgagagc
ctcttacccttgcttgtctcttcatggaggcattgatcagtatgacagggacagcataat
taatgatttcaagaatggaatttgcaaacttctggtggccacatctgtagcagccagggg
cttggatgtaaaacagctgatgctggtggtcaattacagctgtcccaaccattatgaaga
ttatgtgcaccgagcaggccgaactggacgagccggcaataaagggtatgcatatacatt
cattactgaggatcaggcacggtatgctggtgatatcattaaggctttggaattgtctgg
gaatccaattcctactgatttggagaagctctgggctgacttcaaagaccagcagaaggc
tgagggaaagttgattaaaaaaagcagtggattctctggcaaaggttttaaatttgatga
gacagaacaggctttggctaatgaaagaaagaagctacagaaagcagctcttggcttgca
agattcagatgatgaagatacagctgttgatatcgatgaacaaattgaaagcatgttcaa
ttcaaagaaaagagtaaaagacatggcagcaccaggaacatcaaatgctcctacaccatc
agctgggaatgcagaaaaattggaaattgctaaaagattggctttgagaatcaacgccca
gaagaatcttggagcagaggcacaagtattggtccccttccacttcaaggatgtgatgca
gcaggctacaaacgccatcctgagaggaggcacgattcaagctcctactgtatctgccaa
gaccattgcagagcaactggctgaaaaaatcaacgctaagctcaattatgtacccataga
gaagcaggaggaagagaaacaggacggaggacagaatgaatcctttaagagatacgaaga
agaattagagatcaatgacttcccacagactgccagatggaaagtgacctccaaagaagc
gctacagagaatcagtgaatattctgaagctgctattacaatcagaggaacttatttccc
tccaggcaaagaacccaaggaaggagaacgaaagatttacttggctatagaaagtgccaa
tgaactggctgtacagaaggcaaaggcagaaatcacacgacttataaaagaggagctcat
cagattgcaaaattcataccaaccaaccaacaaaggaagatacaaagttttatga
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