Leptosomus discolor (cuckoo roller): 104340910
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Entry
104340910 CDS
T08399
Symbol
DDX18
Name
(RefSeq) ATP-dependent RNA helicase DDX18
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
ldi
Leptosomus discolor (cuckoo roller)
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ldi03041
]
104340910 (DDX18)
03009 Ribosome biogenesis [BR:
ldi03009
]
104340910 (DDX18)
Enzymes [BR:
ldi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
104340910 (DDX18)
Spliceosome [BR:
ldi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
104340910 (DDX18)
Ribosome biogenesis [BR:
ldi03009
]
Eukaryotic type
90S particles
Helicases
104340910 (DDX18)
Pre-60S particles
104340910 (DDX18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
AAA_30
Motif
Other DBs
NCBI-GeneID:
104340910
NCBI-ProteinID:
XP_009949759
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MRRLSFRPCGRGLVGRTVGSAMCRSGVRLNKRWRSSAFLFSYSGSTETKKVKTEEDEPVE
VEDEDKQDSGEKEVEEEGEEDEVPSLPLGVTGAFEDNSFASLAGIVSENTLKGINDMGFT
HMTEIQHKSIKPLLEGRDILAAAKTGSGKTLAFLIPAVELIYKLKFMPRNGTGVIILSPT
RELAMQTYGVLKEVMNHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGRLLDHMQNTP
GFMYKNLQCLVIDEADRILEVGFEEEMKQIIKLLPKRRQTMLFSATQTRKVEDLAKISLK
KEPLYVGVDDNKETATVDGLEQGYVVCPSEKRFLLLFTFLKKNRKKKLMVFFSSCMSVKY
HYELLNYIDLPVLAIHGKQKQTKRTTTFFQFCNAESGILLCTDVAARGLDIPEVDWIVQY
DPPDDPKEYIHRVGRTARGINGRGHALLILRPEELGFLRYLKQARVPLSEFEFSWSKVAD
IQSQLEKLIEKNYFLHKSAQEAYKAYIRAYDSHSLKQIYDVNNLDLPKVSLSFGFKVPPF
VDLNVNSNHGRRLQKRGGGGGFGYQKSKNVHKAKIFKHISKKSDSRQFSR
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgactttcgtttcggccctgtgggaggggacttgtcgggcggactgtgggaagt
gccatgtgtcggtccggtgtacgcttgaataagcgctggaggtcttcagcattcctgttc
tcttattccggttctacagaaactaaaaaagtgaaaactgaagaagatgaacctgtggag
gtagaagatgaagataagcaggattctggagagaaagaagtggaagaggagggggaggag
gatgaagtgcccagtttaccgctaggtgtaacaggtgcttttgaagacaattcttttgct
tccctggctggtattgtcagtgagaatacactgaaaggcataaatgacatggggtttacg
cacatgactgaaattcagcataaaagtattaagccgcttctggaaggcagggatatttta
gcagctgcgaaaacaggcagcggcaaaacacttgcgtttcttattcctgcagtagagctc
atctacaagctgaaattcatgcctagaaatggaacgggtgttattattctatctcctact
cgagagcttgctatgcaaacctacggggttcttaaagaagttatgaatcatcacgttcac
acctatggtctgataatggggggcagtaacagatcagcagaagcacagaagcttggaaat
ggaatcaacatcattgtagcaacaccaggaagactgctggatcatatgcagaacacccca
ggtttcatgtataagaacttgcagtgtttggtaattgatgaggcagatcgtatcttggag
gttggatttgaagaagaaatgaaacagatcataaaacttctaccaaaacgcagacagacg
atgcttttttctgctacgcaaaccagaaaggttgaagatctggcaaagatctccctgaag
aaagagccgctgtacgttggggttgatgataacaaggagacagcaacagtagatggtctt
gagcaggggtatgtagtgtgtccatctgaaaaaagattccttttactcttcacattcctc
aagaagaaccggaagaagaaactaatggtatttttttcttcgtgtatgtcagtgaagtac
cactatgaattactcaactacattgatctgcctgttttggccattcatggcaagcagaaa
caaaccaaacgtactacaacatttttccagttctgtaatgcagaatctggaatactgttg
tgcactgatgttgctgccagaggattggatattcctgaggttgactggattgtccagtat
gaccctccagatgatccaaaagaatatattcatcgtgttggtcgaactgccagaggcata
aacggtagaggacacgctctgctcattttacgaccagaagaactgggctttcttcgttac
ctaaaacaagccagggtaccactaagtgaatttgaattttcttggtccaaagttgcagac
atccagtctcagctggaaaaactgattgagaagaactacttccttcacaaatcggcccag
gaagcatacaaagcttacattagagcttatgactcccattctctgaagcagatctatgac
gtcaataacttggatcttcccaaagtcagcctttcatttggttttaaagttcctccattt
gttgacctcaatgtgaacagcaaccatggcagaagactacagaaaagaggtggaggtggg
ggatttggttaccagaaatcgaagaacgtccacaaagccaaaatcttcaagcacattagc
aagaaatcggacagtcggcagttttctcgttaa
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