Leptosomus discolor (cuckoo roller): 104341617
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Entry
104341617 CDS
T08399
Symbol
VPS18
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
ldi
Leptosomus discolor (cuckoo roller)
Pathway
ldi04140
Autophagy - animal
ldi04148
Efferocytosis
ldi05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
104341617 (VPS18)
04148 Efferocytosis
104341617 (VPS18)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
104341617 (VPS18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ldi04131
]
104341617 (VPS18)
Membrane trafficking [BR:
ldi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
104341617 (VPS18)
Hops complex
104341617 (VPS18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-C3HC4_2
zf-RING_16
zf-RING_Vps41
zf-RING_5
DUF2229
zf-RING_11
zf-ANAPC11
zf-RING_UBOX
zf_RING_Vps8
zf-RING_2
Nup54_57_C
DUF5600
zf-rbx1
DUF1664
Lact-deh-memb
KNOX2
Motif
Other DBs
NCBI-GeneID:
104341617
NCBI-ProteinID:
XP_009955507
LinkDB
All DBs
Position
Unknown
AA seq
949 aa
AA seq
DB search
MDAKYGYVNARLEKETPIFNKQRIDFAPPEKINSLVVSSNQLCMSLGKDTLLRIDLGKPD
EPNQVELGRKDEAKVYKMFLDHTGSHLLVALNTSECLYLNRSVQKVRALSRWKGHLIESV
GWNKFLGSETNTGPILVGTAQGQIYEAEISVSEGSLFSTNPDQYFRQVYTLEEESGPAPV
CCLEIERGIEGKFFIIATTRKRLFQFVGKVPEGTEQQGFSSIFAMHADHLPSFREFPANL
GFSEIALYTPKLRSYPHTFAWMMGNGVLYGTLDFSRPDSILSDERVWVYPSDIDITVNKP
ISIVLTQFHFLLLLPDRVKAVCTLNGQVVFQDLFLEKFGLLTCMIKDPTVQQIWIHTEKV
VFRYHVQRESRDVWKMYMNMNKFDLAKEYCKDRPECLDIVLAKEAEHCFQNKRYLDSAKC
YALTQNYFEEIALKFIEAKQEEALMEFLIKKLSNLKPSEKTQTTLLTTWLTELYLNWLGI
LEGDPSQRNLYLDTREKFRTFLSSPKNKDCLFNNRASIYELLASHGDTEHMVYFAVIMQD
YERVVAHHCQHDEYDEALNVLSRHRDEKLFYKFSPVLIQHIPKKVVDAWISMGSRLDARN
LIPALVNYSQSASTQQINEAIRYMEFCVYQLEETQQAIHNYLLSLYALCRPDSLLSYLEQ
AGTNPNRIHYDLKYALRLCAEHGHHHACVHIYKVMELYEEAVDLALQVDVDLAKSCADLP
EDDEELRKKLWLKIACHVVQEEKDVKKAMACLSSCALLKIEDVLPFFPDFVTIDHFKEAI
CNSLEDYNKHIEELKREMEEATQSAKRIREDIQEMRNKYGSVEPQEKCAACDFPLLNRPF
YLFLCGHMFHYDCLLQAVFPNLPAYKQAKLEDLQKKLAATSQPSKSHHRPKDADTISLGK
GQPSREQIKADIDDIVAAECVYCGELMIRSIDKPFIDPQKYEEEMQSWL
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggatgctaagtatggatatgtgaatgcacgactggagaaggaaacaccaatatttaac
aagcaaaggattgattttgctcctccagagaaaattaacagcttagtagtctcctctaac
cagctctgtatgagccttggcaaagacacccttctcaggattgatcttgggaagccagat
gaacctaatcaggtagagctgggacgcaaagatgaagccaaagtctacaagatgtttttg
gaccacacaggctctcatctcctggttgctctgaacaccagcgaatgcctttacctgaac
agaagcgttcagaaagtgcgagcactctcccgctggaaaggccacttgattgaaagtgtt
ggctggaacaaatttcttggttcagagaccaacactgggcctatactggtggggacagcc
caggggcagatctatgaggctgaaatctctgtcagcgagggaagcctcttcagcactaat
cctgaccagtacttccgacaggtctacactctggaggaggagtcaggacctgccccagtc
tgctgcttggagattgaacgagggatagaagggaaattttttattatagccaccactcga
aagagactcttccagtttgttggcaaagtgcctgaagggacagagcagcaaggcttcagc
tctatatttgctatgcatgctgaccatttgcccagcttccgggagtttccggccaacctt
ggttttagtgaaatagccctttacaccccaaaactgcgctcctacccacacacctttgcc
tggatgatgggaaatggtgttttatatggtacattggattttagccgtcctgattcgatt
ttgagtgatgaacgggtttgggtttatccttctgatattgacataactgtgaacaagcca
atatccattgtacttacccaattccacttcctgttgctgctgcctgatcgggtgaaggct
gtatgcactctgaatgggcaggttgtttttcaagatctgttcctggagaagtttggctta
ctgacatgtatgatcaaagatcccacagtccagcaaatatggatccacactgagaaagta
gtgttccgctaccacgtccagcgggaatctagagatgtgtggaagatgtacatgaatatg
aacaagtttgatttagccaaagagtattgtaaagaccgtccagagtgcctagatattgtg
ctggcaaaagaggcagagcactgcttccaaaacaagaggtatctagacagtgccaaatgc
tatgcactgacccagaattactttgaggagattgcccttaagttcattgaagccaagcaa
gaagaggccctgatggaatttctgattaagaagctaagtaacctaaagccttctgagaag
acacagacgactctgctgaccacatggttaacggagctgtacctgaactggctaggtata
ttggaaggagatccctcacagcgaaatctctatttggatacacgagagaagtttcgcact
ttcctgagcagtcctaaaaacaaggactgtctatttaataaccgggcgtctatttatgag
ctgttggcaagccacggggacacagaacacatggtctactttgcagtcatcatgcaggac
tatgagcgtgtagtagctcaccactgccagcatgatgagtacgatgaagctctaaatgtg
ctgtccaggcacagagatgagaagctgttctacaagttttctccagtcctcatccagcat
attcccaagaaggtagttgatgcttggatttctatgggctctagactggatgccaggaac
ctcattccagcccttgttaactatagccagagtgctagcacccagcagatcaatgaagcc
attagatatatggagttctgtgtctatcagttggaggaaacccagcaagcaattcacaac
tacctgttgtctctttatgctttgtgtcggccggactcgctgctatcatacctggagcag
gcaggaaccaacccaaacaggatccactatgacctgaagtatgcgttgcgcctgtgtgca
gagcatgggcaccaccatgcatgtgtccatatttacaaagtgatggaattatatgaggag
gccgtggatcttgccttacaggtggatgttgatcttgccaagtcttgtgcagacctccct
gaagatgatgaggaactccggaagaagctctggttgaagattgcttgccatgttgttcag
gaagagaaggatgtcaagaaggcaatggcctgcctctccagctgtgccctgctgaagatt
gaagatgtcctgccattctttccagactttgtcactattgaccatttcaaggaggcaatc
tgtaactccctggaggactacaacaagcacattgaggagctgaaaagggagatggaggaa
gccacacagagtgccaagagaatccgagaggacatccaggaaatgagaaataagtatggc
tctgtggagcctcaggaaaagtgtgctgcttgtgactttccacttctaaaccgccctttt
taccttttcctctgtggtcatatgtttcactatgactgtctcctccaggcagttttccca
aaccttcctgcctataagcaggcaaaacttgaagatcttcagaagaagttggcagctacc
agtcagccttccaagagccaccatcgtcccaaggatgcagataccattagcttggggaag
gggcagccaagccgggaacagatcaaagctgacattgatgatattgtagcagctgaatgt
gtgtactgtggtgagctgatgatccggtccattgacaagccttttattgatccccaaaag
tatgaagaggagatgcaaagctggctgtag
DBGET
integrated database retrieval system
