Leptosomus discolor (cuckoo roller): 104342031
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Entry
104342031 CDS
T08399
Symbol
LSM8
Name
(RefSeq) LSM8 homolog, U6 small nuclear RNA associated
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
ldi
Leptosomus discolor (cuckoo roller)
Pathway
ldi03018
RNA degradation
ldi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104342031 (LSM8)
09123 Folding, sorting and degradation
03018 RNA degradation
104342031 (LSM8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ldi03019
]
104342031 (LSM8)
03041 Spliceosome [BR:
ldi03041
]
104342031 (LSM8)
Messenger RNA biogenesis [BR:
ldi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104342031 (LSM8)
mRNA degradation factors
5'-3' decay
Lsm complex
104342031 (LSM8)
Spliceosome [BR:
ldi03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
104342031 (LSM8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
104342031
NCBI-ProteinID:
XP_009953144
LinkDB
All DBs
Position
Unknown
AA seq
111 aa
AA seq
DB search
LHVNLSENVNVSFRYLYKHFLNELSGTVAVITSDGRMIVGTLKGFDQTINLILDESHERV
FSSSQGVEQVVLGLYIVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVVH
NT seq
337 nt
NT seq
+upstream
nt +downstream
nt
gttacatgtgaacctttcagaaaatgttaatgtatctttcagatatctctataaacattt
ccttaatgaactatcaggtactgttgcagtaattacttctgatggaagaatgattgtggg
aaccctcaaaggttttgatcagaccattaacttgattttggatgaaagccatgaacgagt
gttcagttcttcacaaggagttgaacaagtagtgctgggattatacattgtgagaggcga
taatgttgctgtcatcggtgaaattgatgaagagacagattcagctctcgacctggggaa
tattcgagcagaacctttaaactcagttgtgcattga
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integrated database retrieval system
