Leptosomus discolor (cuckoo roller): 104342370
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Entry
104342370 CDS
T08399
Name
(RefSeq) endoribonuclease Dicer-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
ldi
Leptosomus discolor (cuckoo roller)
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ldi03036
]
104342370
Chromosome and associated proteins [BR:
ldi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
104342370
microRNA pathway
RISC loading complex
104342370
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dicer_dsRBD
Ribonuclease_3
Ribonucleas_3_3
PAZ
DSRM_2
dsrm
Motif
Other DBs
NCBI-GeneID:
104342370
NCBI-ProteinID:
XP_009944268
LinkDB
All DBs
Position
Unknown
AA seq
986 aa
AA seq
DB search
YRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSS
RLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILVPELCAIHPIPASLWRKAVCLP
SILYRLHCLLTAEELRAQTATDAGVGVKSLPADFRYPNLDFGWKKSIDSKSFISIPNSSL
VENENYCKHSTIVVPENAAHQGANRTSSIENHDQMSVSYRTLLNESPSKLQIDVSAELAA
INGVSYNKNLANGNCDLVNRDFCQGNQLNYCRQEIPVQPTTSYPIQNLYNSENQPKPSNE
CTLLSNKYLDGNANRSTSDGCPKMAVTTSTSKAINLSKDRADSEKNPSSGYSSKTLGPNP
GLILQALTLSNASDGFNLERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNC
NLYRLGKKKGLPSRMVVSIFDPPVNWLPPGYIVNQDKSNTDKWEKDEMTKENLLANGKLD
DYDDDEEDEDLMWRLPKEETDFEDDFLEYDQEHIKFIDNMLMGSGAFVKKISLSHFSTTD
SNYEWKAPKKSSLGNVQFSSDFDDFDYSSWDAMCYLDPSKAVEEDDFVVGFWNPSEENCG
VDAGKQSISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKK
TDWESTLCATRENCNSEQKNLSPNSVSASVANSEPSLYKDLEYGCLKIPPRCMFDHPDAE
KTLNHLISGFENFEKKINYSFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLI
TKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQ
MEKNEMQGMDSELRRSEEDEEKEEDIEVPKAMGDIFESLAGAIYMDSGMSLEMVWQVYYP
MMRPLIEKFSANVPRSPVRELLEMEPETAKFSPAERTYDGKVRVTVEVVGKGKFKGVGRS
YRIAKSAAARRALRSLKANQPQVPNS
NT seq
2962 nt
NT seq
+upstream
nt +downstream
nt
gtatcggaattttgatcagcctcatcgattctatgtagctgatgtatacactgatcttac
tccactcagtaaattcccatcccctgaatatgaaacttttgctgaatattataaaacaaa
gtataatcttgaccttaccaatctcaaccagccactgctggatgtggaccacacatcttc
aagacttaatcttttgactcctcgccatttgaatcagaaggggaaagcacttccactaag
cagtgctgagaagaggaaggcaaagtgggaaagtttgcagaataagcagatactagttcc
agagctctgtgctatacatcctattcctgcatcattgtggagaaaagcagtttgcctccc
cagcatactttatcgcctgcactgccttttgacggcagaagaactaagagctcaaacagc
cactgatgctggtgtaggggttaaatcacttcctgcagatttcagatatcctaacttgga
cttcggatggaaaaagtctattgacagcaaatctttcatctctattcctaactcttcttt
agtagagaatgaaaattactgtaagcacagcacaattgtagtccctgaaaatgctgcaca
tcaaggtgctaatagaacctcttctatagaaaaccatgaccaaatgtctgtgagttacag
aacattgctcaatgagtcacccagtaaactccaaattgatgtctcggcagaacttgcagc
aattaatggtgtttcttacaataaaaatcttgccaatggcaattgtgatttagttaacag
agacttttgccaaggaaatcagctgaattactgcaggcaggaaatacctgtacaaccaac
tacctcatatcccattcagaatttatacaacagtgagaaccagcccaagcccagcaatga
atgtactctactgagtaataaataccttgatggaaatgctaacagatctacctcagatgg
atgccccaaaatggcagtgacgaccagtacttcaaaagctattaatctttcaaaagacag
agcagattctgaaaagaacccttccagtgggtactcctcaaaaactcttggtcctaatcc
tggtctcattcttcaagctttgactctttcaaatgctagtgatggatttaatctggagcg
gctagaaatgcttggtgattcatttttaaagcatgccatcactacatacttgttttgcac
ttaccctgatgctcatgagggacggctgtcatatatgagaagcaaaaaagtcagcaactg
taacttgtatcgcctcggaaaaaagaaaggactgcctagtcgtatggtggtatcgatttt
tgatcccccggtcaattggcttcctcctggttacatagtaaaccaggacaagagcaacac
tgataagtgggagaaagatgaaatgacaaaggagaacttgttggctaatggtaaacttga
tgattatgatgatgatgaagaggatgaagacctaatgtggaggttacccaaggaagaaac
agactttgaagatgattttctggagtatgatcaggagcatatcaaattcattgataatat
gctaatgggatcaggggcttttgtgaagaaaatttcgctctctcacttttcaaccactga
ttcaaactatgaatggaaagcacccaaaaagtcgtccctgggtaatgttcagttttcatc
agattttgatgattttgactatagctcttgggatgctatgtgctatctggatcctagcaa
ggctgttgaagaggatgattttgtagtgggcttctggaatccatcagaagaaaactgtgg
tgttgatgcaggaaaacagtctatctcatatgacttgcatacagagcagtgtattgctga
caaaagcattgcggactgtgtggaagccctgttgggctgctatctgaccagctgtggtga
aagagctgctcagcttttcctgtgttctttggggctgaaggtgctccctgtaattaaaaa
gactgattgggaaagcactttgtgtgctaccagagagaattgtaacagtgagcagaaaaa
tctttcaccaaactctgtttctgcttctgtagctaattcagagccttctctgtataaaga
cctggagtatggctgtttgaagattccaccgaggtgtatgtttgatcacccagatgctga
aaaaaccctaaatcaccttatttctggttttgaaaactttgagaagaaaataaactacag
ttttaagaacaaggcttaccttcttcaggcatttactcatgcctcgtaccattataatac
cattactgattgttaccagcgcttagaattcctgggagatgcaattttggactacctcat
aaccaagcacctttatgaagacccacggcaacactctccaggagttcttactgacctacg
atctgctctagtcaataataccatttttgcatcactagctgtaaagtatgactaccataa
gtacttcaaagctgtctctcctgaactgtttcatgttattgatgactttgtgcagtttca
gatggaaaagaatgaaatgcaaggaatggattctgagctcagaagatctgaagaagatga
agaaaaagaggaagacattgaagtaccaaaggccatgggggatatatttgagtcccttgc
tggtgccatttatatggatagtggaatgtctttggaaatggtttggcaagtgtactatcc
aatgatgaggccattaatagaaaaattttctgctaatgtgccccgttccccagtgcgaga
gctgctggagatggagccagagacagccaaatttagtcctgcagaaagaacttacgatgg
aaaggtcagagtaacagtggaagttgtaggaaagggaaaatttaaaggtgttggcagaag
ctacaggattgccaaatctgcagctgcgagaagagcactacgaagcctcaaagcaaatca
acctcaggtcccaaacagctga
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