Leptosomus discolor (cuckoo roller): 104342924
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Entry
104342924 CDS
T08399
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
ldi
Leptosomus discolor (cuckoo roller)
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ldi03041
]
104342924 (RBM39)
Spliceosome [BR:
ldi03041
]
Common components
Common spliceosomal components
General mRNP proteins
104342924 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
104342924
NCBI-ProteinID:
XP_009944971
LinkDB
All DBs
Position
Unknown
AA seq
522 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHDRKRSRSKERKRSRD
RERKKSRSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQTRLSQQNEVLAAAASVQPLATQCFQL
SNMFNPQTEEEAGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAV
NALHGRWFAGKMITAAYVPLPTYHSLFPDSMTATQLLVPVRR
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgatattgatattgaagcaatgcttgaagctccttacaagaaggatgagaac
aaattgagcagtgccaatggccatgaagaacgcagcaagaagagaaaaaagagcaagagc
cgaagtcgaagccatgacaggaagaggagcagaagtaaggaacgcaaacggagcagagat
cgggaaaggaaaaagagcagaagccgggagaggaaacggagcagaagcaaagaacgcagg
cgcagccgttctagaagtagagatcgcagattcagaggccgctatagaagtccctattct
ggtccaaaattcaacagtgccatcagagggaagattggtctgcctcacagcatcaaatta
agcagacgacgctccagaagcaaaagtcccttcagaaaagacaagagccctgttagagaa
cctattgataatctgacccctgaagagagggatgctcgaacagtattctgcatgcaactg
gctgcaagaattcgaccgagagacctggaagaatttttctctacagtagggaaggttcgt
gatgtcagaatgatttcggatagaaattccaggcgttcaaagggaattgcttatgtagaa
tttgttgatgttagttcagtgcctctggcgataggactaaccggacagagagtcctgggt
gtaccgatcatagtgcaggcatcacaggcagagaaaaacagagcagcagcaatggcaaat
aatctacagaagggcagtgctggtcctatgaggctgtatgtgggatcgttacacttcaac
ataactgaagatatgcttcgaggaatttttgagccatttggcaggattgaaagcattcag
ctgatgatggatagtgaaactggacgctcaaaaggatacggattcattacgttctcagac
tctgagtgtgctaaaaaggccttggaacaactcaatgggtttgagctggctggtaggccg
atgaaagttggacatgtaactgagcgcactgatgcttccagtgctagttcgtttctggac
agtgatgagttggaacggactggaattgacttgggaacaactggtcgccttcagttgatg
gcaagacttgcagaaggtactggtctgcagattcccccagctgcccagcaggctctgcag
atgagtggatctttggcgtttggagctgtggcagatttgcaaacaagactgtctcagcag
aatgaagttctggctgcagctgcctctgtacaaccacttgcaacacagtgcttccagctt
tccaacatgtttaatcctcaaactgaagaagaagctggctgggatacagaaattaaagat
gatgtgattgaggaatgtaacaaacacggaggagttatccacatctatgtagacaaaaac
tctgctcagggcaacgtgtatgtcaaatgtccttccatcgctgctgccatcgcagctgtc
aacgcgttgcatgggaggtggtttgcaggtaaaatgattacagcagcgtatgtacctctt
ccaacgtaccatagccttttcccagattccatgactgcaacccaactactggttcccgtt
cgacgatga
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