Leptosomus discolor (cuckoo roller): 104343422
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Entry
104343422 CDS
T08399
Symbol
PKD1L2
Name
(RefSeq) LOW QUALITY PROTEIN: polycystic kidney disease protein 1-like 2
KO
K04988
polycystin 1L2
Organism
ldi
Leptosomus discolor (cuckoo roller)
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ldi04040
]
104343422 (PKD1L2)
Ion channels [BR:
ldi04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
104343422 (PKD1L2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Polycystin_dom
PKD_channel
PLAT
Gal_Lectin
REJ
Lectin_C
Ion_trans
GPS
Abhydrolase_9_N
Motif
Other DBs
NCBI-GeneID:
104343422
NCBI-ProteinID:
XP_009945614
LinkDB
All DBs
Position
Unknown
AA seq
2505 aa
AA seq
DB search
MTSQAFEGGSKKSDVISKTSATHGTELRMRLGIAVLISLAVCLAAEEATIDEGIPCSKYQ
LAFNHSCYEFVRLQRTFTSAQSWCERGGGHLVFIENEETQEFLQKHIAEDQEWWIGLVSN
SLLNETADGSMIWLDSSNISYSNWYNDQPSPFSSTCGYILKNAKYQWGVTENCSQEFDFI
CEFESGQSIACDNYNATVQCGSGEVIQIGESFYGRKTPHYCVSETPLQYDTNEDCSWISV
KDEVAGQCHGLQACQVAADGTLFGDPCPASRSYLSIQYHCEEGLQLFVPDTCFVFENITI
SLNWLLSPYSGNLSCIISTGDGHTIDPYYPLTLVSNVTYRYSSPGEFTVFVECTTSEWHV
MAEKRVTVQDKMDQLSITGCYTRYESGNSSHCRTLYGELLWIQVELNGGNGMTYILLADN
MTITESSAKEGIVPHNLTLDSASQELLGPGIHQLEIRASSNTTASEISESIAVHLIEPVS
GLQAALASHTLQLGENLEMNVSVSHGAPDKLKVEVIGPNETHSHNEDGPHGEPRTYIIPV
HSEGTFLVKVVAMNAFSNMSLDLGFITVLANSSHKKDSAKEEGSSKINTQKTNHHKRKTK
IYIKPSRHVDPFTTVTLGWPDDSNNSSFLWSCGACWPEWNQCMQQHIILINQTEVQIPPS
CLPPPKSAVTVTVTIRNHGNEERQDEQCLYVTAKPELQLEIRCEANCKPVNASDEVVLSV
SGQKDSQAIYYNWYLDNTFQTKSMTLPLACGLTGFRQNSLSLLQSNTSTLKMNSSFLQTQ
GEAFQIKVTAMTQRGYGEETYLVSTVPPPEIPSCAVSPKQGSVLTAFTISCSAPCLAESC
QSTQNRQLTYCFYLKSNSLLHCGPDPELFPVYLPLGEEENNFIIHMTITVSNNFGDTVQT
NASVKVGHADMIDGNLTLQAIVAEKANTVLKDGNNSMSLFQLYKSVTSVLNQETQEESFN
TSLQTNTRKELRGLMLTTLSAVNVTSMQTALKMSEVLKEITHKSEELSVSAQVEASNSLK
DVSASLLTVNTEDSRDDQKLKDAANYLFNAVSNVLKASAETRAANTSVPEAEQSSVSHQL
LNTVENLQSALLFGKEPDDEPTVLTSPSATMYIHRLQTENMDGTSINISNSSSASFTLPS
ASSLSVSGTDETVDIRMVSFAVNPFFSSDTSFDISGTVGGLSLTGLDGLIIPVSNLKENI
EIMLPRFSATQEDKILLNLGNFSTFQVNVTSENTSIVIHLESEHDIPLILYLGYGYRPNE
TNYDMKNHLVPISSTGETNTWVLSPEELIFGEGAYYFTVLQDMGMDSTVYDRLTIAVTCF
ASRCVFWDEHQGNWNSYGCHVGPKTNPRSTQCLCNHLTFFGSSFFVIPNAIDVSKTAQLF
GTFVENPVVVTTVGCIFLIYVLVVIWARRKDIQDDAKVKITVLEDNDPFAQYRYLVTVFT
GHRRGAATTSKVTLTLYGLEGESEPHHLTDPDTPVFERGGVDVFLLCTFFPLGELQSVRL
WHDNSGNSPSWYVNRVLVHDLARDQKWYFLCNSWLAVDIGECVLDKVFPVATEQDMKQFS
NLFFMKTSKGFQDGHIWYSVFSRSPRSSFTRAQRVSCCFSLLLCTMLTSIMFWGVPKDPA
EQKMDLGKIEFTWQEVMIGFESSLLMFPINLLIVQIFRNTRSQPVTQGREKPGKNGRVSP
SLPPTPQVTQAVSLTPEAVIKDIRRIANSLFKALKTPSPISVSDLGKTTNINTLLALVED
IICQQNRSWQEFYDDSKKKDDTIIVTLGATDIQEKTRSPTPEKGMCERLKYSDYNRCLYM
QLQHVEMELELLGPHKFQMPQSYTQAVRQVQHMKNLLENQICSSASTTERWSLTPSFFGD
GKKSSSSRGLPWWFVFIAWFLVAATSGVSGFFTMLYGLHYGKENSIKWLISMAISFLESL
FITQPLKVLGFAAFFALVLKKVEPEDEENTAIDGPLSAAGNCLXSDSNPLLGARRDSRSN
IYRPPPAADVEKMKINCMKEQKAFALIREILAYLGFLWMLLLVAYGQRDPNSYYLNKHIE
NSFTDGFHDVYSYQDFFTWANTTLIKNLYGSYKGFITDGNSKLVGSARIRQVRVKGDTCP
ISPKLQRVIQXXXXXXXXXTSDYGEHWNASVFDNSSDLSSAWQYQSQSKLRGQPSWGKLA
IYRGGGYVIHLGTDPKNASRILQYLFNNVWLDTFTRAVFVEFTVYNANVNLFCIISLMFE
TNALGAFFTSAELQSVRLYPYTNSLHIFVIAAEVIYFLFIVYYMTVQGKLMKTLRWRYFH
SKWNLLEMAIILISWSALSVFVKRTILGTRDISYYQEHKEDCVSFNETARADAVLGYLIA
FLVLLSTVKLWHLLRLNPKLNMITSTLRRAWGDISGFITVIAIMFLAYSIATNLIFGWKL
YSYKTLFDSAETMVSLQLGIFNYEEVLDYNPILGSFLIGSCIIFMTFVVLNLFISVILVA
FSEEQKHYQASEEEEIVDLMLLKLFSFFGIKCKKEEKPATNDQLE
NT seq
7518 nt
NT seq
+upstream
nt +downstream
nt
atgacctctcaagcttttgaaggtggcagtaaaaagagtgatgtgataagcaagacaagt
gccacacacggcactgagctgaggatgaggcttgggatcgcagttctaatttctcttgct
gtatgtttggctgcggaggaagcaaccattgatgaaggaatcccttgctcaaagtaccag
ctagctttcaaccattcatgctatgagtttgttaggctccagcgtaccttcacaagtgcc
cagagctggtgtgagagaggaggagggcaccttgtcttcattgaaaacgaggaaacccag
gagttcttgcaaaaacatattgctgaggatcaggaatggtggataggactggtctcaaac
tccttgctgaacgaaactgctgacgggtcaatgatttggctggactcttcaaatataagc
tacagtaactggtacaatgatcagccatctcccttctcatccacatgcgggtacatcctg
aagaatgccaagtatcagtggggtgtgactgaaaattgcagccaggaatttgacttcatt
tgtgagtttgaatctggccagagcattgcttgtgacaattacaatgccactgtacagtgt
ggatcaggagaagttattcaaattggagagagcttctatggacggaagacccctcactac
tgtgtatcggagactcctctccagtatgacacaaatgaagactgtagctggatcagtgtc
aaagacgaagtagcaggccagtgtcatggtcttcaggcctgccaggtggcagcagatggc
actctgtttggagatccttgtccagcttccagaagctatttgtctattcagtaccactgt
gaggaaggtctgcagctgtttgtaccagatacatgctttgtctttgaaaacatcactatc
agcttgaactggctgctctctccatattctggcaacctttcctgtatcattagcactgga
gatggccacactattgatccttactaccctctaacactggtcagcaatgtcacatacaga
tattcatctcctggagagtttactgtgtttgtggaatgcaccaccagcgaatggcacgtg
atggcagagaagcgggtgactgttcaagataagatggatcaactaagcattactgggtgc
tatacccggtatgaatctgggaacagctctcactgccgtacactgtatggggagttgctg
tggattcaagttgaactcaatggaggcaatggaatgacctacattctattagcagataac
atgacaatcactgaatccagcgctaaggaaggaattgtccctcacaatctgacacttgac
agtgcctctcaagagctgctaggcccagggatacaccagctggaaatccgagcatccagc
aacacaaccgcatcggagatctctgagagtatcgctgttcacttaattgagccagtatct
ggccttcaggctgcattagcttctcacactctgcagctgggggagaatttggagatgaat
gtctctgtctcccatggtgccccagataagctgaaggttgaagtgattggacctaacgaa
actcactctcacaacgaagatggccctcatggggaacctcgaacgtacatcattcctgtg
cactctgaaggtactttcctagtgaaagtggtggccatgaatgccttctcaaacatgagt
ctggatcttgggttcatcactgtgttggcaaacagttctcataaaaaagactctgctaag
gaagaaggcagctccaaaataaacacccaaaagacaaatcatcacaaaagaaaaaccaaa
atatatattaaaccgagtcgccatgtggatcctttcacaactgttacacttggctggcca
gacgacagcaataattccagttttctctggtcctgtggagcttgctggcctgagtggaac
caatgcatgcagcaacacataatcctaatcaaccaaactgaggtgcaaatcccaccttcc
tgcctccctcctccaaagtcagcagtgactgtcacagttaccatccgaaaccatggcaat
gaagagagacaagatgagcaatgtctctatgtgactgcaaaaccagaactgcaattggaa
atcaggtgtgaggcaaactgcaagccagtgaatgctagtgatgaagttgttttgagtgtc
tctggacagaaggactcccaggccatatattataactggtatttagataacacgttccaa
accaagtctatgaccctccctctagcctgtggcctgactggtttccggcagaactctttg
agtttgcttcaaagcaacacatccacgttgaaaatgaacagctccttcttgcagacacag
ggagaagcttttcagattaaagtaacagcaatgactcagcgtggctacggggaggaaacg
taccttgtcagcaccgtgcctccgcccgagatccccagttgtgccgtgtctcccaagcag
ggatcagtgctcaccgcgttcaccatctcctgcagtgccccttgcttggcggagtcatgc
cagtccactcagaacaggcagctcacttactgcttctatctgaaatcaaattctctcctg
cactgtggcccagatcctgaacttttcccagtttatcttccacttggagaagaagaaaat
aatttcattatacatatgacaattactgtcagcaacaactttggtgatacagttcaaact
aacgcttcagtgaaggttggacatgcggatatgatcgatgggaacctgaccctgcaggct
attgtagctgagaaggcaaacaccgtcctaaaggatgggaacaacagcatgagtcttttc
cagctgtataagtcagtgacatccgtccttaaccaggagacccaagaggaaagctttaac
acctctttacagacaaacacacgaaaagagctccgagggctgatgctgacaactctttct
gctgttaacgtaacatcaatgcagactgctctcaagatgtcagaagtattgaaagaaatc
actcacaagagtgaagagctgtctgtctcagcccaggtggaagccagcaacagtctaaaa
gatgtcagtgcttccttgctcacagtaaacacagaggacagtagagacgatcagaagcta
aaggatgcagccaactatctctttaacgcagtgagcaacgttcttaaagcttctgcagaa
accagagctgcaaacacttcagtgccagaagcagaacagagttcagtgtcacaccagctc
ctgaatacagttgaaaatctacagagtgcccttctgtttgggaaagagccggatgatgaa
ccaacagtccttacttctccctctgccacaatgtacatacacagattacaaacagaaaac
atggatggtacatccattaacatctccaattccagctctgccagctttactctcccatct
gcttcctctctcagtgtttcaggaactgatgaaacagtggatataaggatggtgagcttt
gccgtgaatccctttttctccagtgacaccagttttgacatcagtggaacagtgggaggt
ctaagtcttactggtctggatggcttgatcataccagtcagcaatctcaaagagaacatt
gagataatgttaccaaggttttcagcaactcaagaagataagattttgttgaatctgggc
aattttagcactttccaagtaaacgttacctccgaaaacacatctatagtgatccacctg
gaatctgaacatgacattccactaatactctacttagggtacggttatcgcccaaatgaa
actaattatgatatgaaaaatcatctcgttccaatctctagtacaggtgagacaaacacc
tgggttcttagcccagaagaactaatttttggagagggagcctactatttcacggtttta
caagatatgggaatggattccacagtctatgacaggctaactatagctgtcacttgcttt
gcatcccgttgcgtattttgggatgagcaccaggggaactggaacagctatggatgccat
gtaggaccaaaaacaaatcctagaagcacacagtgcctctgcaaccatctgaccttcttt
gggagctccttcttcgtcatacccaatgccatagatgttagcaaaactgcacagctattt
ggcacctttgtggagaaccctgtggtggtgaccactgtaggatgcatctttctgatatat
gtgcttgtagttatttgggctcgaaggaaagacatccaggatgatgccaaagtgaaaatc
acagtactggaagacaatgacccctttgctcagtatcgttatcttgtgacagtttttaca
ggacaccgccgtggggcagccacaacctccaaggtgactctcaccctctatggactggaa
ggagagagtgagccacatcatctgactgatcctgacacaccagtcttcgaacgtggagga
gtggatgtttttctactctgtaccttcttccctcttggggaactgcagagtgttagactg
tggcatgataattcaggcaacagtccatcctggtacgtgaatcgagtattggtccatgat
ctggcacgggatcagaagtggtacttcctctgtaactcttggctagctgttgatattgga
gaatgtgtcctagataaagtgttcccagtagctacagaacaggacatgaagcagttcagt
aatctgtttttcatgaagacctcgaagggtttccaggatgggcacatctggtactcggtt
ttcagccgctccccacgaagctccttcacccgagcccagcgtgtgtcatgttgcttctca
ctgcttctctgcaccatgctgaccagcatcatgttctggggagtgccaaaggatccagct
gagcagaaaatggatttgggtaagatcgagttcacatggcaggaagtgatgattggcttt
gagagctccctcctcatgttccccatcaacctgctcattgtgcagatcttcaggaataca
cgatctcagccagtcacgcaggggagagagaagccgggaaagaacggtcgagtgtcccca
agcctacctcccaccccacaggtcacccaggctgtctcactcactccagaggctgtgata
aaggacataagaagaattgccaactcactctttaaagccctgaagactccatctcccatt
tcagtatcagatcttggaaaaacaactaacatcaacacacttttggcattggttgaggac
atcatctgccagcagaacagatcttggcaagagttttatgatgacagcaagaagaaggat
gacactataattgtcacattgggtgctacagatatacaagaaaaaacaagaagcccaact
ccagagaagggaatgtgtgagcggctgaaatacagtgactacaatcgctgcttgtacatg
caactccagcatgtagagatggagctggaattactggggccccataaatttcagatgcct
cagagttacacacaagctgttcgtcaggtacagcacatgaagaacctcctggagaaccag
atctgctcatcggcatccaccactgagaggtggtcccttactccaagcttctttggtgat
ggcaagaaaagttcttcttccagagggctgccctggtggtttgtgttcattgcttggttc
cttgttgcagccaccagtggtgtatctgggttctttacgatgctctatgggctgcattat
ggcaaggagaactccatcaagtggctgatctctatggccatctccttcttggaaagtctt
ttcatcactcagcccttaaaggtgctgggatttgctgctttttttgctctggttctgaag
aaggtggaacctgaggacgaagaaaacacagctattgatgggcctttatctgcagcaggt
aactgtttgtaaagtgattcaaatcctctcttaggagcccgacgggacagtaggagcaat
atttaccggccacctcctgctgctgatgtggagaaaatgaaaatcaactgcatgaaggag
cagaaagcattcgctctcatcagagaaatcctggcctatctggggtttttatggatgctg
ttactggttgcctatgggcagagagatcccaattcctactacttaaacaaacacatcgag
aacagctttacagacggattccacgacgtctacagttaccaggattttttcacatgggca
aacactaccttaatcaaaaatctttatggatcatataaaggattcattacagatggcaat
tccaagctggtgggtagtgctcgaattcgccaagtaagagtgaaaggagacacctgccct
atttctcccaagctccagcgtgtgattcagnnnnnnnnnnnnnnnnnnnnnnnnnnnaca
tcagactatggggagcactggaatgcttcggtcttcgacaactcttctgacttgagctca
gcatggcagtatcagagccagtccaaactgagagggcagcccagctggggcaaacttgcc
atctacaggggagggggatatgtgattcacctgggaactgatcctaagaatgcctccaga
attctccagtaccttttcaacaacgtctggctagacaccttcacaagagcagtgtttgtc
gaatttacagtctacaatgccaatgtgaacctgttctgcattataagcctgatgtttgaa
accaatgctttaggggccttcttcacaagcgcagagctgcaaagtgtccggctttaccca
tacaccaacagtctccacatctttgtcattgcagcagaagtaatttatttcctctttatt
gtgtactacatgacagtacagggaaaactgatgaagactctgagatggagatacttccac
agcaagtggaatctcctggagatggccattatactgattagctggagtgccctgtcagtg
tttgtgaagcggacaatccttggtacccgagacatcagctactaccaggaacacaaagag
gactgtgtaagctttaatgaaacagcaagagctgatgcagttcttggctacctgattgcg
ttcctagtgcttctctccacagtgaaactgtggcatctcctgaggctcaaccctaaactg
aacatgatcacttcaactctaaggagggcatggggggacatctctggattcatcactgtt
attgcaatcatgttcctcgcctattccattgctacaaacttgatatttggctggaagctc
tactcttacaaaactctctttgattcagcagagaccatggtcagtcttcagctgggaatc
ttcaactatgaggaggtcctggactacaatccaattttaggctccttcttaattggatcc
tgcataattttcatgacatttgtcgtactgaatctgttcatttctgtgattctggttgct
tttagtgaggagcagaagcactaccaggcttcagaagaagaggagattgttgatctcatg
ctactgaaacttttcagtttcttcgggattaaatgcaagaaggaagagaagccagccacc
aacgatcaactggaataa
DBGET
integrated database retrieval system
