Leptosomus discolor (cuckoo roller): 104344002
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Entry
104344002 CDS
T08399
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
ldi
Leptosomus discolor (cuckoo roller)
Pathway
ldi03022
Basal transcription factors
ldi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104344002
09124 Replication and repair
03420 Nucleotide excision repair
104344002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ldi03021
]
104344002
03400 DNA repair and recombination proteins [BR:
ldi03400
]
104344002
Transcription machinery [BR:
ldi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
104344002
DNA repair and recombination proteins [BR:
ldi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
104344002
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Zn_ribbon_GTF2H2
IBR
Motif
Other DBs
NCBI-GeneID:
104344002
NCBI-ProteinID:
XP_009946337
LinkDB
All DBs
Position
Unknown
AA seq
395 aa
AA seq
DB search
MDDEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKRLYEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGLIVTKSKRAEKMTEL
SGNLKKNITALKKAVDMNCSGEPSLYNSLNLAMETLKHMPGHTSREVLVVFSSLTTCDPA
NIYDLIKCLKAVKIRVSVIGLSAEVRVCTVLARETGGTYHVILDESHYKELLMHHVSPPP
ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMAQLENNSEPGLTLGGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEVPLEEYQGERCCQGCQGEMKDQNVYRC
KVCQSAFCVECDLFVHDSLHCCPGCINEHPAPISI
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgacgaacctgagcggactaagcgctgggaaggaggctacgagagaacatgggaa
attcttaaagaagacgaatccggatcactgaaagcgacgatcgaggacattcttttcaag
gcaaagaggaaaagactctatgagcaccatggacaagttcgacttggaatgatgcgtcac
ctttacgtggttgttgatggatcaagaactatggaggaccaagatttaaaaccaaacaga
cttacttgcactttgaagttactggaatattttgttgaagagtactttgaccaaaatcct
attagtcagattggcttaattgtaaccaagagtaaaagagctgaaaaaatgacagaactt
tcaggtaacttgaaaaagaacataactgctctgaagaaagcagtggatatgaactgcagt
ggagagccgtctctatataattccctaaatttggccatggagactttaaagcacatgcca
gggcatacaagcagagaggttttggtagtcttcagcagtctgacgacatgtgatccagcc
aacatctacgatctgattaagtgcttaaaagcagttaagatcagagtgtctgtcattggc
ctaagtgctgaagttcgagtttgtacagtactggcccgagaaactggtggaacataccac
gttattttagatgaaagtcattataaggaactgctgatgcatcatgttagccctccacct
gccagttcaagttctgagtgctcccttattcgaatgggttttcctcagcatactattgct
tctctgtctgatcaagatgcaaagccatcctttagcatggcgcaactggaaaacaacagt
gagccgggtcttacactcggtgggtatttctgtccccagtgcagagccaaatactgtgaa
cttcctgtggaatgcaaaatctgtggtcttacattagtgtctgcacctcacctggctcgg
tcttaccatcacttgtttcctttggatgcctttcaggaagttccactggaagaatatcag
ggggaacggtgttgtcaaggctgccagggagaaatgaaagatcaaaatgtctatagatgt
aaagtgtgtcagagtgcattttgcgtggaatgcgatttgtttgttcatgattctctgcac
tgctgtcctggctgcattaatgagcaccctgctcccatatctatatga
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