KEGG   Leptosomus discolor (cuckoo roller): 104345284
Entry
104345284         CDS       T08399                                 
Name
(RefSeq) LOW QUALITY PROTEIN: putative cleavage and polyadenylation specificity factor subunit 4-like protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
ldi  Leptosomus discolor (cuckoo roller)
Pathway
ldi03015  mRNA surveillance pathway
ldi05164  Influenza A
Brite
KEGG Orthology (KO) [BR:ldi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    104345284
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    104345284
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ldi03021]
    104345284
   03019 Messenger RNA biogenesis [BR:ldi03019]
    104345284
Transcription machinery [BR:ldi03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     104345284
Messenger RNA biogenesis [BR:ldi03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     104345284
SSDB
Motif
Pfam: zf_CCCH_4 zf-CCCH Torus zf-CCCH_3 zf-CCHC zf-CCCH_2 zf-CCHC_5 zf-CCHC_3 zf-CCHC_2
Other DBs
NCBI-GeneID: 104345284
NCBI-ProteinID: XP_009947975
LinkDB
Position
Unknown
AA seq 256 aa
MQELVAGVEKIRFDLEADVERQQGAQPLPFLGTDNGGAVCELFHXGLRTKGAQCPLGHVS
GVKTVVCKHWLRGLCQKGDGHDFLHEDDVTEMPEHYSYSKFGEHRHKDCPFLHVDATAST
RGCPWYDRGFCRHGPLCGSKHTQRAMCANYLVGFCPEGPKCQFVHLKAGLTTSSKDPPKG
LGQLDLAAGEESGRKDEPPVEPPLPGTGATQQPAAQLWDPKSCPPGPQSLLERGICLKCG
QKGHWASKRGKTRLGK
NT seq 771 nt   +upstreamnt  +downstreamnt
atgcaggagctggtggctggtgtggagaagatcaggtttgacttggaggctgatgtggag
cggcagcaaggagctcagcccctgcccttcctgggtacagacaatgggggggctgtctgc
gagctcttccactgagggctgcgcaccaagggagcgcagtgccccttggggcacgtcagc
ggggtgaagacggtggtgtgcaagcactggctgcgcgggctctgccagaagggcgacgga
cacgactttctgcacgaggatgacgtgaccgagatgcccgagcattattcctactccaag
tttggtgagcacagacacaaggactgtcccttcctgcacgttgatgccactgccagcacc
aggggctgtccctggtatgaccgtggcttctgcaggcacggtcccctgtgcgggtccaag
cacacccagagagcaatgtgtgccaactacctcgtcggcttctgcccagaaggacccaag
tgccagttcgtgcacctcaaggccgggctgacgacaagcagcaaggacccccccaagggg
ctgggacagctggatctggctgctggtgaggagagcggccgcaaggatgagccacccgtg
gagccccctctcccaggcactggtgctacccagcagccggcagcgcagctgtgggacccc
aagagctgccccccgggcccacagagcctgcttgaacgaggaatctgcttgaagtgcggc
cagaaaggtcactgggccagtaagcgtgggaagactcggctggggaagtga

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