Leptosomus discolor (cuckoo roller): 104345529
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Entry
104345529 CDS
T08399
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
ldi
Leptosomus discolor (cuckoo roller)
Pathway
ldi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104345529 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ldi03019
]
104345529 (HBS1L)
Messenger RNA biogenesis [BR:
ldi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104345529 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
GIP1_N
Motif
Other DBs
NCBI-GeneID:
104345529
NCBI-ProteinID:
XP_009948310
LinkDB
All DBs
Position
Unknown
AA seq
613 aa
AA seq
DB search
YNSSMSLLARLNSCLDQMREVLAESVPEQTMVQAVLDSKFDVQKALDLVLSQGSKQNVKM
KNEDAVIVGKTTKGKTRDSQSARMESEIVPKITKMTVSGKKQSMGFEVPCVIAEENGHAN
TPQKGLLTEDASVASGVLEAVSKSALSPQVVQVSEEQNTVPTPVKKSSKTKPQIDVKAEL
EKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQESKKAGKASFAYAW
VLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITGAAQADVAILVVDA
SRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQEITSKLGQFLKQ
AGFKESDVAYIPTSGLGGENLVTRGQSNDLTQWYKGKCLLEQIDSFKPPQRSVDKPFRLC
VADVFKDQGSGFCVTGKIEAGYIQVGERLLAMPPNETCTAKGITLHDEPVDWAAAGDHVS
LTLTGMDIIKINVGCVFCDPKEPIKVCTRFRARVLIFNIEVPITKGFPVLLHYQTISEPA
TIRRLLSVLHKSTGEVTKKKPKFLTKGQNALIELQTQRPVALELYKDFKELGRFMLRYSG
STIAAGVVTEIKE
NT seq
1844 nt
NT seq
+upstream
nt +downstream
nt
cttataacagtagtatgtctcttttagcccgtcttaattcatgccttgatcaaatgagag
aagttttggcagagtctgtaccagagcaaacaatggtgcaagcagtactggatagtaaat
ttgatgtacagaaggctttggatcttgtgctttcacaaggcagtaagcaaaatgtgaaga
tgaagaatgaggacgctgtgattgtaggaaagacgacaaaaggaaaaacaagggattccc
agtcagccagaatggaatctgaaattgtgccaaaaattaccaaaatgacagtgtctggaa
agaaacaatctatgggatttgaagttccatgtgtgattgctgaagaaaatggccatgcta
acacacctcagaaaggactgttaactgaagacgccagtgtagcttctggggtacttgagg
cagtctcaaaatctgctctttcaccccaagtagtgcaggtttcagaagagcagaatacag
tgcctactccagtaaaaaagtcaagcaagacaaagccacaaatagatgtgaaagcagagt
tggagaagagacaaggaggaaagcaactgcttaatttggtggtaataggacatgttgatg
caggtaaaagtactttaatgggtcatctgctctacctattgggaaatgtgaacaaaagaa
ctatgcacaaatacgaacaggaatctaagaaggctggcaaagcttcgtttgcctatgcgt
gggtcttggatgaaactggtgaagaaagagaaaggggagtgacaatggatgtgggtatga
ccaaatttgagacaaagactaaagtaattacactgatggatgctccaggccacaaagact
tcattccaaatatgatcacaggagctgcacaggctgatgtagctattttggttgtggatg
ctagcagaggagagtttgaagcagggtttgagacgggcggtcaaactcgagaacatggat
tattagtgcgctctcttggagtgacacagctagctgttgccgtcaataaaatggaccagg
tcaattggcaacaggaaagatttcaggagattacgagtaagcttggccaatttcttaaac
aagctggctttaaggaatcagatgtagcttatatcccaacgagtggccttggtggtgaaa
acctggtcacaaggggtcagtcaaatgacctcacacagtggtataaaggaaagtgtttgt
tagagcaaattgattctttcaagccaccacagagatcagtggataaaccatttaggttgt
gtgttgctgatgtttttaaagaccaaggatcaggattttgtgtgactggtaaaatagaag
caggctatattcaagttggagaacgacttctggcaatgcctcccaatgaaacttgcactg
caaaaggaatcacattgcacgatgaaccagttgattgggctgcagcaggagatcatgtta
gtctcactttgaccggcatggatatcatcaaaatcaatgttggctgtgtattttgtgatc
ccaaggaacccattaaagtttgcactcgtttcagagctcgggttctcatcttcaacattg
aggttccaatcactaaaggctttcctgtgcttttacactatcaaaccataagtgaacctg
ctactattagaagactgttgagtgtcctgcacaaaagcactggtgaagtgacaaagaaaa
aacctaagttcttgactaaaggacagaatgctctaatagaactacaaactcaaagacctg
tcgctctagagttgtataaagattttaaagagcttgggaggtttatgttacgctacagtg
gttccactattgctgcaggagttgtcacagagattaaagaatga
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