Leptosomus discolor (cuckoo roller): 104346004
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Entry
104346004 CDS
T08399
Symbol
GEMIN5
Name
(RefSeq) LOW QUALITY PROTEIN: gem-associated protein 5
KO
K13133
gem associated protein 5
Organism
ldi
Leptosomus discolor (cuckoo roller)
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ldi03019
]
104346004 (GEMIN5)
03041 Spliceosome [BR:
ldi03041
]
104346004 (GEMIN5)
Messenger RNA biogenesis [BR:
ldi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
104346004 (GEMIN5)
mRNA cycle factors
P-body specific factors
104346004 (GEMIN5)
Spliceosome [BR:
ldi03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
104346004 (GEMIN5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GEMI5_RBS
TPR_GEMI5
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_WDR5
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_WDHD1_1st
ANAPC4_WD40
DSE1_N
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
PAC11
Beta-prop_WDR19_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
WD40_Gbeta
Beta-prop_RIG_1st
Beta-prop_TEP1_C
ASA1
Beta-prop_EIPR1
Beta-prop_WDR35_TULP_N
Beta-prop_WDR41
WD40_RFWD3
Beta-prop_Nup120_160
DNAI3_WD
WD_LRWD1
TPR_IF140-IFT172
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
104346004
NCBI-ProteinID:
XP_009948930
LinkDB
All DBs
Position
Unknown
AA seq
1467 aa
AA seq
DB search
VVGAGELIGHTDRISGFAFCRCPGQSSLCASSSDDGSVKIWDTESLAAVAEYGLHQNAIS
ALHWSPLVKDLIVSGDEKGIIVCYWHNRSDSQQFFPEPRTIFCLTCSPHHENLVAIGYKD
GMVVIIDISRQREPVAGEERFPAWQDELQVSSEEGKVPNGELTQDKTTKKGCYLASGSKD
QTIRIWSCTRGRSVMTLKLPPTKRRGGAVDPAVKERIWLTVHWPSGRPTEMVSSSFGGEL
LLWDLTQSGKRKWTLLGSSEGQNHSRIVFNLSSVKHQNKELLFSISMDRDVKCWDLSTLD
CSWTMPSLGGFVYSLAFSPVDPGCLAIGVGDSMIRVWNTLSINNIYDVKTFWQSIKSKVT
ALSWHPTKEGCLAFGTDDGKVGIFDTFSSSTKNKPPQISSTYHKKTVYTLAWGPPTPPLS
SEGEGEQPSVTLYSCAGEGIVFQHNPWKLNGEANDINKVIRDTNSIKHKLPARTEISWKP
DGKLLALGNEDGSIEIFQAPNLKLLCSIQQHHKLINAIRWHHEHGSQPELSYLIASGSIN
ATIYVHNLKSIVESTSESPLTITEPFRTLAGHTAKITSLSWSPHHEGRLVSACYDGTAQV
WDVMKEEPLCNYRGHQGRLLSVQWSPVDSDCVYTGADDFSVHKWHISKQEHTRPPQGKKS
IELEKKRSMQPKVKTKKKKKXXXXXXXXXXXXXANGDENAKEMLLEENGVSDHEEEVVQE
AEVPDKVSVTVSKDTSSSAYDYSSFSLLKPFGTQKAAPAKKDPPKEKPTPDASLKKRKPR
SILPFSTFMDHRSKDEMHQDCLRLATCLKTKDNNEDASPDLKDRIHLGLFADRDSLHKMI
DVEGKHHLENGHPELFQQLMLWKGDMKGVLQAAAERGELTDQLVAISPMVGYQAWVWTVE
AFVKQLCFQEQYVKAASHLLSIHKVYEAVELLKVNHFYREAIVIAKARLRPDDPILRDLY
SSWAALLEKDGHYSMAAKCYLGASSPYDAVKVLAKKGDVTSLKIAAELALISGEEDLSAS
LSFRCAQDLLLSRNWVGAQEVLQQHKTLFGQRLVFCLNELLCKCLSERNPCERKSPVPPC
YHSWELNRGTSFFDMVIGVWQNALGMDTAERAACAREQLRRIEHPPSTSNTHPKQVLYHI
SHDLTLAALSYQTAMWDEAVKSIVGAVIRSYDAGNFTLMQEICSILLPEGCDNLRHMLDS
TNSQSMDACRSLEGFVAYGLLYDLWWKLPKDPPVLQKAGLDPVLCPSEQTALEKSYVSGQ
VSSSSEETPDQTAVEMDENLCSTTEVHRCETESDSRTVSVDLVDRQSKLNGCKVLLSDEI
ADLQNTQRDIAEVQQILAGMIRQHQQQRNNLQETTNGSTQESNLQQSSETESDKPCSDSN
QMNCQDEVKEPITLPELTKQLLKAKQKLAEFPDNLKVFPFPDVLECCLVLLHMGSQCPPE
LHEQALDLLRKRGSTSAYKKAGRRFLT
NT seq
4404 nt
NT seq
+upstream
nt +downstream
nt
gttgtcggtgcaggagagctcatcgggcacacggaccggatctccgggttcgcgttttgc
cgctgccccgggcagagcagcctttgcgccagcagctccgacgacgggagcgtcaagatt
tgggacacggagagcctggctgcggtggcggagtacggcctgcaccagaacgcaatctca
gcgttgcattggtcaccccttgtgaaagatttgattgtctccggtgatgaaaaaggtata
attgtttgttactggcacaacagaagtgacagccagcagttcttcccggagcctcggaca
attttttgtctcacttgttctcctcatcatgaaaacctggtggcaatcggctacaaggat
ggcatggtggttatcattgatatcagcaggcaaagagaacctgtggctggtgaagaaagg
ttccctgcttggcaagatgagctccaagtttcttcagaggaaggcaaagttccaaatggg
gagctgacacaggacaaaaccacgaagaaaggttgttacttggcttcgggaagcaaagat
cagaccatacgaatatggagctgtaccaggggcagaagtgtaatgactttgaagttgcca
cccacgaaaagaagaggtggagccgttgatcccgctgttaaagagcgcatttggctgact
gttcactggccttctggtcgtcccacagaaatggtatccagctcttttgggggagaactg
ctactgtgggatttgacccaatctggaaaacgcaagtggacacttctgggatcttcagaa
ggacaaaatcactcccgtattgtgttcaatctgagttctgtgaagcatcaaaacaaggag
ctccttttttccatttcaatggacagagatgtgaagtgctgggacctgtcaactctcgac
tgtagctggaccatgccctcgctcgggggatttgtctatagtcttgccttctcccctgtg
gacccaggctgtcttgccattggcgttggagacagcatgatacgggtgtggaatactttg
tccatcaacaatatttatgatgttaaaacgttttggcaaagcataaagtccaaggttaca
gcattatcctggcatccaactaaggaaggctgcttggcttttggaacagatgatggaaaa
gttggcatatttgacaccttctccagcagtactaagaataagccacctcagatctccagt
acttaccacaagaagactgtatacacattagcctgggggcctccaactcctcctctctct
tctgaaggagaaggtgaacagccgtctgtaactttatacagttgtgctggagaaggcatt
gtttttcaacacaacccctggaagcttaatggggaggcaaatgacatcaacaaagtcatc
cgagacaccaattcaatcaaacacaaactgcctgcgcgtacagagatcagctggaaacca
gatgggaaactcttggctcttggcaatgaagatggctcaatcgaaatatttcaggcgcca
aacttgaagttgctctgcagtatccagcagcatcataaactgattaatgctattcgttgg
catcatgagcacgggagccagccagagctgagttacttgatagcttcaggctcgatcaac
gccactatttatgtacataacctgaagagcatcgtagagagcacttcagaaagtcctttg
acaataacagagccttttcgaactctggctgggcacacagctaaaatcacaagcctctcc
tggagcccccaccatgagggaagattggtgtctgcttgctacgatggcactgcacaggtg
tgggatgtaatgaaggaagagccactctgcaactaccgagggcaccagggccggctactg
agcgtccagtggtcacccgtggattcagattgtgtttatacaggagcagatgatttttca
gttcacaagtggcacatctcaaagcaggagcatacacggcctcctcagggcaaaaagagt
atagaattggagaaaaaaagaagcatgcaaccaaaagtgaaaaccaagaagaagaaaaag
nncnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnccgcgaatggagatgagaatgcc
aaggaaatgttgctagaggaaaatggagtttcggaccacgaagaagaagtggttcaggag
gcagaggtgcccgataaagtctccgtgactgtgtccaaggatacatcttcatctgcatat
gattactcttcattcagcttactgaagccttttgggacccagaaagccgctcctgcgaag
aaggatccacctaaagagaaaccaactcctgatgcctctctgaagaaaaggaagcctcgt
tctattctacccttcagcacattcatggatcacagatcaaaagatgaaatgcatcaggac
tgcttgaggctggccacatgtctgaaaaccaaagataataatgaagatgcgtcccccgac
ctcaaggatcgcatccacttggggctgttcgcagacagggattctctgcacaagatgatt
gatgtggaaggaaaacatcacttggagaatgggcatccagagctctttcaacagctcatg
ttgtggaagggagacatgaagggtgtcctccaggcagctgctgagaggggagagctgaca
gaccagctggtagcaatctcgcccatggttgggtatcaggcctgggtttggacagtagaa
gcctttgtgaagcagctgtgttttcaggagcaatatgtgaaggccgcctcccatctcctg
tccatccataaagtgtacgaggctgtcgagctcctgaaagtgaaccatttttacagggaa
gcgattgtaatcgctaaggccaggttgcgtccagatgatccaattctgagggatctctac
agcagttgggcagctctgttagagaaagatggtcattattccatggccgccaaatgttat
ttgggagcctcctcaccctacgatgcagttaaggtgttggcaaaaaagggggatgtgaca
tcccttaaaattgctgctgagcttgcgctgatatctggagaggaggacttgtcagcaagt
ttgtctttcagatgtgcccaagacctgctgttatccaggaactgggtgggagctcaggaa
gtccttcagcaacataaaactttatttggacaaagacttgttttctgccttaatgaactg
ctttgcaagtgccttagtgaaagaaatccctgtgagcgaaagagccccgtgcctccctgt
taccacagctgggagctgaacagaggcacctcattttttgacatggtgataggagtgtgg
cagaacgcattgggcatggacaccgctgaacgagccgcgtgcgcacgggagcagctgcgc
aggatcgagcatcctccttctaccagcaacacgcacccaaagcaggtgctttaccatatc
tcccatgacctgacccttgcagccctgagctatcagactgctatgtgggatgaggcagtg
aaaagtattgttggagctgtgatccgcagttatgatgctggtaatttcactctgatgcaa
gagatttgcagtatcctcctccctgaaggctgtgataacctgagacacatgcttgacagc
acaaactctcagagcatggatgcttgcagaagtttagagggctttgtggcttacggactg
ctgtatgacctgtggtggaagctacccaaagacccccctgtcttgcagaaggctggtttg
gatcccgtgctgtgtcccagtgagcagacagctcttgagaagagttacgtttcaggtcag
gtttcatcctcctctgaagaaacccctgatcaaactgcagttgagatggatgaaaacctc
tgcagtacaactgaagttcataggtgtgagacagaaagtgactcgagaactgtctcagtc
gatttggtagacagacagtcaaaactgaatggctgcaaagtgcttctctcggacgagatc
gctgatttgcagaacacccagagagatatagctgaggtccagcagattttagcaggtatg
atccgccagcatcagcagcagaggaacaatctccaggaaaccacaaatggaagcacccag
gaaagcaacctgcagcagagttcagagactgaatcagacaaaccgtgctctgacagcaac
cagatgaattgtcaagatgaagtaaaggaaccaattacactccctgagctaacgaagcag
cttctaaaagcaaagcagaaactagcagaatttccagacaatttaaaggtcttccccttc
cctgacgtgctggagtgctgccttgtcctcctccacatgggatcccagtgccctcctgaa
ctacacgagcaggcgttggatctccttaggaagcgtggtagcaccagtgcttacaaaaag
gctggtaggaggttcttgacgtga
DBGET
integrated database retrieval system
