Leptosomus discolor (cuckoo roller): 104346075
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Entry
104346075 CDS
T08399
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ldi
Leptosomus discolor (cuckoo roller)
Pathway
ldi03020
RNA polymerase
ldi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
104346075 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
104346075 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ldi03021
]
104346075 (POLR2B)
03400 DNA repair and recombination proteins [BR:
ldi03400
]
104346075 (POLR2B)
Enzymes [BR:
ldi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
104346075 (POLR2B)
Transcription machinery [BR:
ldi03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
104346075 (POLR2B)
DNA repair and recombination proteins [BR:
ldi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
104346075 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
104346075
NCBI-ProteinID:
XP_009949028
LinkDB
All DBs
Position
Unknown
AA seq
1167 aa
AA seq
DB search
MQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVEDAPPIDL
QAEAQHATGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTYSAPLYVD
ITKTVIKEGEDQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLDPGGYFII
NGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSMLARGGQGA
KKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEMVKPSLDE
AFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGY
MVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQKFIDRGK
DFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNS
PIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEE
WSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSEVSMIRDI
REREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASGVVEYIDT
LEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSA
MGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIVAIASYTG
YNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGYDQEEVFEKPTRETCQGMRHAIYDK
LDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRFTKRDCSTFLRTSETGIVDQV
MVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEGITPDIII
NPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGYHLRGNEV
LYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFG
EMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGCRNKTQIS
LVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgcagtatgatgaagacgatgatgaaatcaccccggacttgtggcaagaagcctgctgg
atcgttattagctcctattttgatgaaaagggtttagtcaggcaacagctggattctttt
gatgagtttattcagatgtctgtgcagagaattgttgaagatgctccaccaattgatttg
caagctgaagcccagcatgctacaggagaagtggaagagccgccccgatatctgttgaag
tttgaacaaatctatctctccaaacctacacattgggaaagagatggagcaccctcacct
atgatgcccaatgaagccaggctgagaaaccttacgtattcagccccattgtatgtggat
ataactaaaacagttattaaagaaggggaggatcagttacagacacagcatcagaaaact
tttataggaaaaattcctattatgttacgttcaacatactgtttgttgaatggcttaact
gaccgtgatctttgtgaactgaatgaatgcccgcttgatcctggtggctactttatcatt
aatggatcagaaaaggttctgattgctcaggagaaaatggctacaaacacagtgtatgtg
tttgcaaagaaagattcaaagtatgcctacacaggggaatgtagatcttgtctggaaaat
tcctctcgaccgacaagtactatatgggttagcatgctggccagaggcgggcagggtgca
aagaagagtgctattggtcagcgcattgtagcaactttgccatatatcaaacaagaagtc
cccatcatcattgtctttcgtgcactaggctttgtgtccgacagggacattttagagcac
atcatatatgattttgaagatccggaaatgatggaaatggtcaaaccttctctggatgaa
gcatttgttattcaggagcaaaatgttgctctaaacttcattggatcaagaggtgcaaag
ccaggtgtcaccaaagaaaagagaatcaagtatgctaaagaagtcttgcagaaagaaatg
ctcccacatgttggtgtcagtgacttctgtgaaaccaaaaaggcctattttctagggtat
atggttcatagattgttgctggcagcactgggaagaagagagcttgatgacagagatcat
tatggcaacaaaagactggatcttgctgggccactgttagctttcctgttcagaggaatg
tttaagaatttgctgaaggaagtgagaatatatgcacaaaagtttattgacagagggaaa
gatttcaacttggaactggcaattaaaacaagaattatttcagatggtttgaagtattca
ttggcaactggaaactggggtgaccagaagaaagctcatcaggccagggcaggagtgtct
caggtgttaaaccgcttgacttttgcatctacgctttcccacctgaggcgcctgaattct
ccgattggtagagatggtaaactagcaaagcccaggcagctgcacaatacgctgtgggga
atggtttgccctgctgagaccccggagggtcatgcagtaggacttgtgaagaacttagcc
ctgatggcttacatttctgtggggtctcagccatccccaattttggaattcttggaagag
tggagtatggaaaacctggaagaaatatctccagcggcaatagcagatgctaccaagatc
tttgttaacggctgctgggtaggcatacacaaagatccggagcagctcatgaatactcta
aggaagctccgtcgtcagatggacatcattgtgtcagaggtctcaatgattagagatatt
cgtgagcgagaaatccgcatctatactgatgcaggcagaatttgtcgaccccttttaatt
gtggaaaaacagaagttgctgttgaagaaaaggcatattgaccaactgaaggaacgagag
tataacaattacagttggcaggatcttgtggccagtggtgtagtagagtacattgataca
ctggaagaagagactgtgatgctggcaatgactccagatgacttgcaagagaaaggtgtg
gcatattgttcaacatacacgcactgtgagattcacccatctatgatcctgggagtatgt
gcgtctattatccctttccctgatcacaaccagtctcccaggaacacgtaccagtctgct
atgggtaaacaggctatgggagtttacattacgaactttcacgttcgtatggatacgctg
gctcacgtcttgtattatcctcagaagccgcttgtaaccacacgctccatggagtacttg
cgattcagagagttaccagcgggtatcaactcgattgtagccattgcatcgtacacaggc
tataaccaggaagactctgtcatcatgaaccgttctgctgttgacagaggctttttcaga
tctgtgttctatcgctcatacaaagagcaagagtctaaaaaagggtatgaccaagaggaa
gtttttgaaaagccgacacgcgaaacttgccaaggtatgagacatgcaatctatgacaaa
cttgatgatgatggtttgatagcacctggggtacgtgtgtctggggatgatgtcatcatt
ggcaaaacagtaacactgccagaaaatgaagacgagctggaaagcaccaacagacgtttc
acaaagagagactgtagcacttttctgcgaaccagtgagactggtattgtagatcaggtc
atggtaacccttaaccaggaaggatacaagttctgcaagattagagtacgctctgtaaga
atcccacaaattggagataaatttgccagcagacatggtcagaaaggaacctgtggcatc
cagtacaggcaagaggatatgcccttcacctgtgaaggcatcacacctgatataattatc
aacccccatgccatcccttcccgcatgaccattggccacttgattgagtgtcttcagggg
aaggtgtctgcaaacaagggagaaattggtgatgctacaccttttaatgatgctgtcaat
gtgcagaaaatttccaatcttttgtcagattatggctatcatctgagaggaaatgaggtc
ctctacaatggcttcactggtcgaaaaatcacatcacagatcttcattggtcctacatat
taccagcggttgaagcacatggtagatgacaaaatccattctcgtgcgagagggccaatc
cagatacttaacagacagcccatggaaggtagatctcgtgatggaggccttcgttttgga
gaaatggaacgagattgccagattgctcacggagcagcccagttcttgagagaaagattg
tttgaagcttcggacccgtaccaagtccatgtctgtaacctctgtggaatcatggcaatt
gcaaacacaaggactcacacctacgaatgccggggatgccgtaataaaactcagatatct
ttggttcgaatgccctatgcctgcaaactcctcttccaagagctgatgtctatgagtatc
gcacctcgtatgatgagtgtttag
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integrated database retrieval system
