Leptosomus discolor (cuckoo roller): 104346195
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Entry
104346195 CDS
T08399
Name
(RefSeq) LOW QUALITY PROTEIN: transcription intermediary factor 1-alpha-like
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
ldi
Leptosomus discolor (cuckoo roller)
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ldi01001
]
104346195
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ldi04121
]
104346195
Enzymes [BR:
ldi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104346195
Protein kinases [BR:
ldi01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
104346195
Ubiquitin system [BR:
ldi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
104346195
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
104346195
NCBI-ProteinID:
XP_009949178
LinkDB
All DBs
Position
Unknown
AA seq
925 aa
AA seq
DB search
GVVRCPICGQECAERHIIDNFFVKDTTEVPSSTVEKSNQVCTSCEDNAEANGFCVECVEW
LCKTCIRAHQRVKFTKDHTVRQKEEVSPEAVGVTSQRPVFCPYHKKEQLKLYCETCDKLT
CRDCQLLEHKEHRYQFIEEAFQNHKVIIETLITKLMEKTKYIKYTGKQIQNRILEVNQNQ
KQVEQDIKVAIFTLMVEINKKGKALLHQLQTLAKEHRLKLLQQQQEMAGLARQLEHVMNF
SKWAVSSGSSTALLYSKRLITFRLRYLLRARCDPSPVTNNTIQFHCDPSFWAQNIFNLGS
LVIEDKESPPHMPKSPVTETNLQPPGNLPANQLSKFPTQISLAQLRLQHMQQQVMAQRQQ
AQRRAGPVSLPHPRMPGAMQQPPAPHQAPPRLIHFQNHNAKSNGSALPAQQMRFPQNQNL
XXXXXXXXXXXXLAQQAMKQWQIGSGQTSTALSTASSTTSTPSSPTVTSAVGCDGKTYGP
PVADLSSPVGSSYNLPSLPDIDCSGNITLDNVVQKDGTAEQNQPKPPSNRTVQSPNSSVP
SPGLSGGVSVTNIHPPIPSSSDSSFPFFLPLSVIYSSGSSSRPPGADSTHKVPVVMLEPI
RIKQESSAPNENFDFPTVIVKQETDEESQPRNATFSRSILTSLLLDSNHNSTSDEAVLRT
AAPDSTDDQPGKPQEKTSSGKTGWTGSSHSGEGRKEDDPNEDWCAVCQNGGELLCCEKCP
KVFHLSCHVPTLMSFPSGEWICTFCRDLSKPEVEYDCDKPAHNSEKRKLEDTVGLAPIDR
RKCERLLLYLYCHEMSLAFQDPVPPTVPDYYKIIKKPMDLSTIKRRLEVTNSFYTKPEDF
VADFRLIFQNCAEFNEPDSEVADAGMKLEEYFEELLRNLYPERKFPVQTNCQSEKDNPEL
TDDSDDDFVQPRKKRLKGEERKLLK
NT seq
2780 nt
NT seq
+upstream
nt +downstream
nt
tcggtgttgtccgctgtccaatttgtggtcaggaatgtgcagagagacacatcatagata
acttttttgtgaaggataccacagaggttcccagtagcacagtagagaaatcaaatcagg
tctgcacaagctgtgaagacaatgcagaagctaatggtttttgtgtggaatgtgtagaat
ggttgtgcaagacctgcatcagagctcaccagagggttaaattcacaaaggatcatactg
tgagacagaaagaggaggtatctccagaggcagttggtgtgaccagtcagcgacctgtgt
tttgcccttaccacaaaaaggagcagttgaagttgtattgtgaaacctgtgacaagttga
cctgccgagactgtcagttactagagcacaaagagcacaggtaccagtttatagaagagg
cttttcagaaccacaaagtgatcattgagacactaatcaccaaactgatggagaagacta
agtacataaaatatacagggaagcagatccaaaacagaattcttgaagtgaatcagaatc
aaaaacaagtggaacaggatattaaagttgccatatttacactgatggtagaaataaaca
aaaagggaaaagctctgctgcatcagctgcagactctggcaaaagagcatcggttgaaac
ttctgcagcaacaacaggaaatggcaggtctcgctagacagctggaacatgtcatgaatt
tttccaaatgggccgtttccagtgggagcagcacagcattactgtacagtaaacgcttga
ttacatttcgactacggtatcttctccgagcaaggtgtgatccttcaccagtgactaaca
ataccatccagtttcactgtgatcctagcttctgggctcaaaatattttcaatctaggtt
ctttggtaattgaagataaagaatccccaccacatatgcccaagagcccagtgactgaaa
caaacttacagccaccaggcaacttacctgcaaaccaactatctaagttcccaacgcaga
taagcttagctcagctccgactccagcacatgcagcaacaggtcatggctcagagacagc
aagctcaacgcagagcaggtccagtaagtttaccgcatccaagaatgccaggagccatgc
agcaacctcctgctcctcatcaggcacctccacgcttaattcattttcagaatcataacg
ccaagtccaatggttcagctcttcctgcacaacagatgagatttccccaaaaccagaacc
tnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncctggcacagcaagctatgaaac
agtggcagatcggaagtgggcaaacttcaactgccctttcaactgcaagcagcacaacat
ctactccatccagccccacagtcactagtgctgtaggatgtgatgggaagacatacggtc
cccctgtggcagatttgagttctccagtgggtagctcctacaatctaccatctcttcctg
atattgattgttcaggaaacatcacattggataatgttgtacagaaggatggcactgcag
agcagaatcagccaaaacccccttcaaacagaactgtgcagtcaccaaattcatcggtac
catcaccaggcctctcaggaggagtcagtgtgacaaacatacaccctccaattccgtcca
gttctgactcttcatttccttttttcctgcctctttctgtcatttacagttctggctcct
ccagcaggccaccaggagctgattctacacacaaagtcccagttgtgatgttggagccga
tcagaattaaacaggagtcaagtgcacccaatgagaactttgatttcccaactgtcatag
tgaagcaagaaacggatgaggaatcacagcctcgaaatgccacattttcaagaagcatac
ttacttcactgctgttagatagcaatcataattccacttcagatgaagctgtcttaagaa
cagctgcaccagacagcacagatgatcaaccagggaaaccgcaggagaagacatccagtg
ggaagacaggatggactggctcctcccacagtggggagggcagaaaagaggatgatccca
atgaagattggtgtgctgtctgtcaaaatggaggggagctcctttgctgtgagaagtgtc
ccaaagtattccatctttcttgtcatgtccctacattgatgagctttccaagtggagagt
ggatttgtacattctgtcgggatttgtccaagccagaagttgaatatgactgtgataaac
ccgctcacaactctgaaaaaagaaaattggaagacactgtgggtttagcaccaatagacc
gtaggaagtgtgaaagactgctgctatacctctactgtcatgaaatgagcctggcttttc
aagatccagttcctcccacagttcctgattactacaaaataatcaaaaagcctatggact
tgtcaaccatcaagagaagacttgaagtgaccaattcattctacacaaagccagaagatt
ttgtggctgatttcagactgattttccaaaactgtgctgaatttaatgagcctgattcag
aggtggctgatgctggcatgaaacttgaagagtactttgaagaacttctaaggaaccttt
atcctgagagaaagttccctgtacaaaccaactgccagagtgaaaaggataatccagaac
ttactgatgactcggatgatgactttgtacagccccggaaaaaacgcctcaaaggagaag
agcgtaagttgcttaaatga
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