Leptosomus discolor (cuckoo roller): 104346333
Help
Entry
104346333 CDS
T08399
Symbol
EXOSC10
Name
(RefSeq) LOW QUALITY PROTEIN: exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
ldi
Leptosomus discolor (cuckoo roller)
Pathway
ldi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104346333 (EXOSC10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ldi03019
]
104346333 (EXOSC10)
Messenger RNA biogenesis [BR:
ldi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
104346333 (EXOSC10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Motif
Other DBs
NCBI-GeneID:
104346333
NCBI-ProteinID:
XP_009949346
LinkDB
All DBs
Position
Unknown
AA seq
841 aa
AA seq
DB search
YALGTVVAATKASNGLPQPGDEYDFYRSFPGFRAYCERQGDRLLQCMSKVMQYHGCHSHI
KDRSKVTELEDKFDMLVDSNDVILERVGILLDEAAGVNKNQQPVLPAGLQPPQTIISSWN
RKAGESHKRAQSETFRLLHAKNISRPQLKFREKIDNSNTPFVPKLFIKPNALKPLPEALT
KSGRERKERPEDLDVPAALADFIHQQRTQQTEQDMFAHPYQYELEHFSPPDGVLTKPEPQ
MYRPIKETPCHFITTLDELVQLNEKLMNCKEFALDLEHHSYRSFLGLTCLMQISTRTEDF
IIDALELRSDMNILNETFTDPAIVKVLHGADSDVEWLQKDFGLYLVNMFDTHQAARLLNL
GRHSLDHLLKLYCNVDSDKQYQLADWRIRPLPEEMIRYARDDTHYLLYIYDKVREALWER
GNEQPTQLQVVWQRSRDICLKKYIKPLFTDESYLELYRRQKKHLNTQQLAAFRLLFAWRD
KMARQEDESTGYVLPNHMLLKIAEELPKEPQGIIACCNPVPPLVRQQINELHLLIQQARE
MPLLKSEIALSVKKRAPLSNPERLENTFFGPHDSSRIPMDDFQNNSALDSERTMNIQGVQ
PESTCLVATATVSIFSECDEEGGNEKTLTTAQQKAQRIMESFENPFRMYLPSEQNPAYVS
QAAKFDPSSKIYEISNRWKLMSQTQVQKESKDATKKKAAQQSAARDQAQKVYKEAAENIV
SVRQQAMQEQANKKRKKXVMSETGTELPKQEKKRPKASQQPEELEAPKQFTPFDYSKSNF
KVFAGSSKSKQSPQFDPAKQAYAGKKFAGAGANKLQQSGNRSMSYLAGKADRGSRHHWPK
R
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
tatgctcttggcacggtggtagctgcgacaaaggcatctaatgggcttcctcagcctggc
gatgagtacgacttctaccgaagcttccctggcttccgggcgtactgtgaaagacagggt
gaccgtctccttcagtgcatgagcaaggtgatgcaataccatggctgccatagccacata
aaagatcgcagcaaagtgacagagctagaagataaatttgacatgctggttgactccaat
gacgtcattcttgaaagagtgggtattttattggacgaggcagcaggagtgaacaaaaac
cagcaaccggtcctccctgctgggttacagcccccacagacgatcatttccagctggaac
cgcaaggcgggagaatcccacaagagagctcagtccgagaccttccgactgcttcatgcc
aagaatatctctcgaccacagcttaagtttcgggaaaagattgacaactccaacactccc
tttgtacctaaactttttatcaagccaaatgctttgaaacctttgcctgaagccctcaca
aaaagtggacgggaacgaaaggagcgccctgaagacttggatgtgccagctgctttggca
gacttcatacaccagcagaggacgcagcaaactgagcaagacatgtttgctcacccttac
cagtatgaactggagcatttttctccaccagatggagttctcacgaaaccagaaccccag
atgtacagacccatcaaggaaacaccctgtcattttatcaccacactggatgagctggta
caactaaatgaaaagcttatgaactgtaaagaatttgccctggacttagagcaccattcc
tacaggagcttcctgggcttgacatgtctgatgcagatttccacccgaacagaggacttc
atcattgatgcgctggaattgcgcagcgacatgaacattctcaatgagaccttcacagac
cctgcaattgtgaaggtccttcatggtgctgattcagatgtggaatggctgcaaaaagac
tttggcctgtacttggtgaacatgtttgatactcaccaagctgctcgtctcctcaatctt
ggcaggcactctttggaccacttgctaaagctgtattgcaatgtagattctgacaagcag
taccagctggctgactggaggatacgccctttgccagaagaaatgattcggtatgcccgt
gatgatactcactacttgctctacatctatgataaagtgagggaggcgctgtgggagaga
gggaacgagcagcccactcagctgcaggttgtgtggcaacgcagcagggacatctgcctg
aagaaatacatcaagcccctctttacagatgagtcctaccttgagctctacaggaggcag
aaaaaacacctcaacacacagcagctggcagcatttaggttgctgtttgcatggagagac
aagatggcgcgtcaagaggatgagagtacaggatatgtgctaccaaatcatatgctattg
aagatagcggaggagctgcccaaagaaccccagggcatcattgcttgctgtaatccagtc
ccaccactagttcgccagcagattaatgaattgcatcttctcatccagcaggcccgggag
atgcctttgcttaagtcggagattgctttgtcagtcaagaagagagcgcctctatccaac
cctgagaggctggagaataccttctttggaccacatgacagttcccggattcctatggat
gattttcagaacaactctgccttggacagtgagaggacaatgaatattcagggtgttcaa
ccagagtcaacatgtcttgttgcgactgccactgtcagcatattcagtgaatgtgatgaa
gaaggaggaaatgagaagactttaacaactgcacagcagaaagctcagcgtataatggaa
tcctttgaaaatccatttagaatgtacctaccttcagaacagaatcctgcctatgtctca
caagctgcgaagtttgacccatcatcaaaaatttatgaaatcagcaatcgatggaagttg
atgagtcagacacaagtacagaaggagtccaaggatgcaaccaaaaagaaagcagcccag
cagtcagctgctcgtgaccaggcacagaaggtgtataaagaggcagcagaaaatatcgtg
tctgttcgtcagcaagctatgcaggaacaagctaataagaagagaaaaaagnnagtcatg
agtgaaacaggaacagagttgccaaaacaagagaagaagcggccaaaagcctcccagcaa
ccagaggagctggaagcaccgaagcagtttaccccctttgattacagcaagtccaacttc
aaagtgtttgcgggaagcagcaaatcaaagcagtcgccacaatttgatcctgccaagcaa
gcttacgcaggcaagaaatttgctggagctggagctaacaaacttcaacaatctggaaac
cgaagcatgtcctacctggcggggaaagctgataggggttccaggcaccactggccaaag
agatag
DBGET
integrated database retrieval system
