Leptosomus discolor (cuckoo roller): 104347254
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Entry
104347254 CDS
T08399
Symbol
COL4A2
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
ldi
Leptosomus discolor (cuckoo roller)
Pathway
ldi04510
Focal adhesion
ldi04512
ECM-receptor interaction
ldi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
104347254 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
104347254 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
104347254 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ldi04147
]
104347254 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
ldi00536
]
104347254 (COL4A2)
Exosome [BR:
ldi04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
104347254 (COL4A2)
Glycosaminoglycan binding proteins [BR:
ldi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
104347254 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
104347254
NCBI-ProteinID:
XP_009950528
LinkDB
All DBs
Position
Unknown
AA seq
1384 aa
AA seq
DB search
GLPGINGFPGLSGERGFPGFDGPPGGYGPRGSKGESGEIGPPGPVSYFPSRIPRKGARGD
PGFPGVSGLQGDPGEEGDRGLPGLPGFSDEDGDKPGLPGEIGPKGEKGEVGLPAYQAGPP
GFPGRHGTPGLRGPPGPAGSPGSLFGLKGQEGTPGRFGMQGFPGLRGPKGPKGEEGDCSR
CLVGDEMRRGSTGPPGPPGFPGTPGQPGRKGEPGDQGPHGIPGYPGPKGFSGQDGFPGPK
GQKGDSLHITTKGTKGIRGDPGLPGIRGEDGFPGRDGLDGLPGQPGLPGDGIRGFPGDPG
YPGELGPKGFPGEAGLPGEGFPGAKGYRGPPGDHGQDGNPGSPGLPGLPGEPGQLDCGQV
IEDFSRGDGTEPIWSGEGCVRPPKGSQGKPGLPGATGAKGARGFPGDPGPVGYPGLNGTR
GDPGREGFPGPPGFTGPRGDRGPNGLPGLQGHPGLTGKSGAPGAAGLKGFPGDVLRATTG
SQGDVGLPGFPGLKGMPGDQGVPGSRGADGNPGLPGPKGDPGPQGLPGLMGLPGIPGTRG
FPGLPGNPGPNGRPGPQGPIGPPGARGEDGEQGFPGPVGLKGLSGDKGETGHPGLQGIPG
VTGPPGIGGMDGFPGDKGSRGSPGIDGFKGMTGLKGRPGIKGIKGEFGPFGARGDKGSQG
ARGFKGDRGDQGPPGEPPKLKPSMMMEVKGEKGDVGERGTKGFFGLKGSKGMPGVPGKTG
TPGSPGHPSYVAGAKGDIGAKGLTGLKGYPGPAGSPGIRGFPGSTGGRGEKGIPGISGHF
GTPGSLGEIGTRGGSGQKGEGGDPGFPGIDGLKGTQGIPGSVGQEGLPGLVGAPGQQGSP
GTPGFQGEKGTPGWPGLPGQAGLPGLRGISGLHGLPGTKGLPGSPGPDGYGSAGFPGTVG
DKGEAGEPSRVEGSRGPPGQKGDRGVPGVQGPFXXXXXXXXXXXXXXNISGYPGDKGSPG
LDGVPGYPGLQGQPGVPAPPGSKGESGQTGVSGQIGPKGSRGDPGSAGGPGVPGYPGPKG
RKGEQGVIGFMGTVGFPGDLGPIGPKGDRGLTGFQGPPGSPGLPPLPPRLVAEQGSPGPR
GNIGPQGSPGDMGPQGPPGDPGFRGSPGDPGLQGRGGIPAPPGSRGEQGATGFQGPVGFE
GQPGRPGSPGLPGMPGRSVSMGYLLVKHSQSDQEPMCPVGMNKLWSGYSLLYFEGQEKAH
NQDLGLAGSCLARFSTMPFLYCNPGDICYYASRNDKSYWLSTTAPLPMMPVAEEDIRPYI
SRCSVCEAPAVAIAVHSQEASIPHCPEGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCL
EDFRATPFIECNGARGTCHYFANKYSFWLTTVDQPFQSKPSADTLKAGLIRSHISRCQVC
MKNL
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
ggactgcctggcatcaatggttttccaggactcagtggagaaagaggttttccaggattt
gatggtccaccgggtggctatggtcctaggggaagcaagggggagtcaggtgagatcgga
cctccaggaccagtttcctattttccttcccgcatcccaaggaaaggtgcaagaggtgat
ccaggatttccaggtgtttctggactacagggagacccaggagaggagggagatcgtggg
ctgcctggtcttcctggattctctgatgaggatggcgataagccaggcttacctggagaa
atagggccaaaaggcgaaaaaggtgaagtaggattgcctgcttatcaggcaggcccgcct
gggtttccaggtaggcacggcacaccaggactccgtggtccacctggtcccgctggatcg
cctggttctctctttggattaaaaggacaggagggtacaccaggaagatttggcatgcaa
ggtttccctgggctaagaggaccaaaaggacctaaaggcgaagaaggggattgcagtaga
tgtcttgtgggtgatgaaatgagaaggggctctactggcccccctggccctcctggcttt
ccaggaacccctggccagcctgggaggaaaggagaacctggtgatcaaggaccacatggt
attcctggctaccctggaccaaaaggattttcaggccaagatggatttcctggaccaaaa
ggacaaaagggagattctttacacataactactaaaggcaccaaaggaatccgaggagat
cccgggctgcctggtatcagaggtgaagatggtttcccaggcagagatggattagacggt
ttaccaggacagcctggacttccgggtgatggtatcagagggtttcctggcgatcctggt
tatccaggtgaattaggcccaaagggctttccaggagaagctggcctgccgggtgaagga
tttcctggtgcgaaagggtaccggggtcctccaggtgaccatggacaagatggtaaccca
ggatctccaggtctgcctggtctgccaggagagcctggccaactagactgtgggcaggtc
attgaagacttttctagaggagatggaaccgagccaatatggtcaggtgagggctgtgtg
aggccaccaaagggatcccaaggcaagccaggactgcctggagccacaggtgcaaaaggt
gcaagaggattcccaggtgatccaggcccagtgggatacccagggctaaatggtacacga
ggtgacccaggtcgggaaggattcccaggtcctccaggttttactgggcccaggggagac
aggggcccgaacggtcttcctggactgcaagggcacccaggccttacaggaaaatccggt
gctccgggagcagcaggactgaagggctttcctggtgatgttttaagagcaacgacaggt
tcccaaggggatgtcgggctccctggcttcccagggttgaaaggcatgccaggagatcaa
ggagtaccaggaagcagaggagcggatggtaacccaggtttgccaggacccaaaggagat
ccagggccgcaaggtctccctggtttgatgggattgccgggaatacccggaacacgtgga
ttcccagggctaccaggaaaccctgggccaaatggcaggcctggccctcaaggacctatt
ggtccacctggtgctaggggagaagatggtgagcaaggttttcctggccctgtgggactg
aaaggtctgtctggtgacaagggtgaaacaggtcacccgggattacaaggtatacctggt
gtgactggtccccctggcataggcggaatggatggctttccaggagataaaggttcaaga
ggttcacctggcattgatggtttcaaaggcatgacaggcctaaaaggaagacctggcatc
aagggaatcaaaggagaatttggtccattcggggctcgaggcgataaaggctcacagggc
gcacgtggctttaaaggtgaccgtggggatcaaggccccccaggagaacccccaaagctc
aagcccagcatgatgatggaagttaaaggtgaaaaaggagatgttggagaaaggggcaca
aagggattctttggcttaaaaggtagcaagggaatgccaggtgttcccggaaagacagga
actccagggtctcctgggcatcccagctacgtggctggtgcaaaaggggacatcggcgca
aaagggctgacaggtctgaaagggtatcctggtccagctggctctcctggcatcagaggc
ttccctggcagcacaggaggcaggggggaaaagggtattccaggaatttcaggccatttt
ggtactcctggctcacttggtgaaataggcacaagaggaggctcaggacaaaaaggtgaa
ggcggtgatcctggtttccctggcattgacggcctaaagggcacacagggtatccctggc
tctgtgggacaggaaggtttgccaggactggtcggcgccccagggcagcaaggaagccct
gggacgcctggattccaaggtgaaaagggaactcccggctggcctggcttaccaggacaa
gcaggcttgcctggcttaagaggaatcagtggactacatggtttaccaggcactaagggc
ttaccaggatcaccaggtccagatggctacggctctgcaggtttcccaggtacagtgggt
gacaaaggggaagcgggagagcccagcagagtggaaggcagccgaggacctccgggtcag
aaaggagacagaggtgttccaggagtccaaggaccctttngnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnncaaatatatcaggatatcctggtgataaaggctccccaggt
ctagatggagtgccaggctacccaggactacaggggcagcctggagtaccggctccccca
ggaagcaaaggagaaagtggacaaacaggtgtgagtggacaaattggcccaaaaggaagt
agaggtgatcctggatcagcagggggacctggcgttcctgggtaccctggaccaaaaggt
cgtaagggtgaacaaggtgtcatcggctttatgggcacagtaggatttccaggtgacttg
ggacctatcggacccaagggggatagaggactaactggatttcagggccctccaggctct
cctgggctgccccctcttcctccaaggctggttgctgaacaaggttcaccaggtccccgt
ggaaatataggacctcaaggaagcccaggagacatgggacctcagggtccaccaggcgat
ccaggtttcagaggctcacctggagacccaggactccagggcaggggtggcattccagct
cctcccggctccagaggtgaacaaggagcaacagggtttcagggtccggtgggatttgaa
ggtcagccgggccgccccggcagccccgggctgccaggcatgccgggtcgcagcgttagt
atgggctacctgctggtgaagcacagccagtccgatcaagagccaatgtgcccagttggc
atgaacaaactctggagtggatacagcctactgtactttgaaggacaagagaaagcacac
aaccaggatctagggctggctggctcctgtttggctcgttttagtactatgccattcctc
tactgtaaccctggggatatttgttattatgcaagtcgaaatgataaatcgtactggctc
tcaactacagcacctcttccaatgatgcctgtggcagaagaagacattaggccatatatc
agtcgctgctcagtttgcgaggccccagctgtggcaattgcggtccatagccaagaagct
tctattcctcactgccctgaaggctggcgcagtttgtggatcggatattccttccttatg
cacactgctgctggtgatgaaggtggaggacagtcactggtttctcctgggagctgcctc
gaagatttcagagcgactcctttcatcgaatgcaatggcgcgcgtggaacctgtcactac
tttgcaaataaatacagcttctggctcactacggtcgaccagcccttccaaagcaagccc
tcggcagatacactcaaagcaggactcatccgaagccatatcagcagatgtcaagtctgt
atgaaaaatttatag
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