Leptosomus discolor (cuckoo roller): 104347403
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Entry
104347403 CDS
T08399
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
ldi
Leptosomus discolor (cuckoo roller)
Pathway
ldi04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
104347403 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ldi02000
]
104347403 (SLC6A4)
Transporters [BR:
ldi02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
104347403 (SLC6A4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
5HT_transport_N
PRONE
Motif
Other DBs
NCBI-GeneID:
104347403
NCBI-ProteinID:
XP_009950714
LinkDB
All DBs
Position
Unknown
AA seq
670 aa
AA seq
DB search
MEKKATSNETEPLTSRKDVSDCNEGEDCKENGLLVRNPKSALRLVEDGNKVHPSQGDKGE
AAQISNGYSAVQSSVPRNGMGEVEDAQCTAPAATTTTTTTTSTTCGAEGQQQLMELEDRE
TWSKKIDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIPYTIMAIFGGIPLFYMELALG
QYHRNGCISIWRKICPIFKGIGFAICIIDLYVASYYNTIMAWAFYYLVSSFTAELPWTSC
TNAWNTGNCTSYFSKDNVSWSLHSISPAEEFYTRQVLQVHKSHGLDDLGGISWQLTLCLL
LIFTIVYFSIWKGVKTSGKVVWVTATFPYIILFILLVRGATLPGAWRGVLYYLKPDWQKI
LATEVWVDAAAQIFFSLGPGFGVLLAYASYNKFHNNCYQDALVTSTVNCVTSFVSGFVIF
TVLGYMAEMRNEDVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMLLTLGLDSTF
AGLEGVITGVLDEFPHVWSKRRELFVLGLTIVCFLGSLATLTFGGAYVVKLFEEYATGPA
VLTVVFLEAIAVAWFYGITQFGNDVKEMLGFTPGWYWRVCWVAISPIFLLFVTCSFLSNP
PKLRLFDYNYPYWTTVVGYCIGTSSVICIPIYMVYRLIITPGTLKERILKSITPETATEI
PFGDIRMNAV
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaaggcaacaagcaatgagactgagccgctgacttccaggaaagatgtctca
gactgtaacgaaggagaagactgtaaagagaacggacttctggtcaggaaccctaaatct
gccctgcggctagtggaggatggcaataaagtccatcccagccagggagataaaggagaa
gcagctcagatctcaaacgggtattccgcggttcagagctctgttccccgcaatggaatg
ggagaggtggaagatgcccagtgcactgccccggcagccacaaccaccactacaaccacc
acttctaccacctgcggagcagaaggccagcagcagctgatggagctagaagacagagag
acctggagtaaaaaaattgactttctactctcagtcattggatatgcagtggatctggga
aacgtgtggagatttccttatatatgctatcaaaacggaggaggagcattcctcattcct
tacacaattatggccatttttggagggattcctctcttctatatggaactagcactagga
caataccacaggaatgggtgtatttcaatttggagaaaaatatgtcctatattcaaagga
attggctttgccatctgtataatagatctttacgtagcctcctactacaacaccattatg
gcttgggccttttactacctcgtatcttccttcacggcggagctgccatggaccagctgc
acaaacgcttggaacacaggcaactgcactagctacttcagcaaggacaatgtcagctgg
tccctgcactccatctctcctgcagaagaattttatacccgccaagttctacaggtgcac
aagtcccatgggctggatgatctggggggcattagctggcaattgaccctctgtttgttg
ttaatcttcaccatcgtatacttcagcatctggaaaggggtcaaaacatctggcaaggtg
gtatgggtgactgccacattcccttacatcatactcttcatcctgctagtgagaggtgca
actttgcctggggcttggagaggtgtcctctactacttgaaacctgactggcagaaaatc
ctggccactgaggtttgggtggatgcagcagctcaaatttttttctcccttggtccaggt
tttggggtcctattggcttatgccagctacaacaaattccataacaactgctaccaagat
gctctggttaccagtaccgtgaactgtgtgactagttttgtgtctggatttgtcattttc
actgtgctgggatacatggccgagatgaggaatgaagatgtgtcagaggttgccaaagat
actggacccagccttctcttcattacgtatgccgaggccattgcaaacatgcctgcttcc
actttctttgccatcatctttttcctgatgttactcacgctgggattagacagcacgttt
gcaggactagagggagtgattactggagtactggatgaattcccacatgtctggagcaaa
cgcagggaattgtttgtccttggtctcaccatcgtttgctttttggggtcattagcaacc
ctcacgtttggaggtgcgtacgtggtaaagctgtttgaagaatatgccactggtcccgct
gtcctaaccgtcgtgtttctggaagcaattgctgtggcctggttctacggcatcacccag
tttggcaatgatgtgaaagaaatgctcggctttaccccaggctggtactggcgagtttgc
tgggtagcaattagccccatcttccttctgtttgtcacttgcagctttctgtccaatcct
cccaagctgcggctttttgattataattatccctactggaccacggtagtgggttattgc
ataggaacctcttctgtcatctgtattccaatctacatggtttaccggttgatcatcact
ccaggaacactgaaggagcgtattctgaaaagcattactccagaaacagctacagaaatt
cctttcggagacatccgcatgaatgcagtataa
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