Leptosomus discolor (cuckoo roller): 104347833
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Entry
104347833 CDS
T08399
Symbol
TTC37
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
ldi
Leptosomus discolor (cuckoo roller)
Pathway
ldi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104347833 (TTC37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ldi03019
]
104347833 (TTC37)
Messenger RNA biogenesis [BR:
ldi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
104347833 (TTC37)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_14
TPR_1
TPR_2
TPR_12
TPR_8
TPR_11
TPR_16
TPR_17
TPR_CcmH_CycH
ANAPC3
TPR_9
TPR_6
ARM_TT21_C
TPR_15
TPR-S
TPR_30
BTAD
SNAP
Fis1_TPR_C
E_motif
TolB_N
HAT_PRP39_N
TPR_5
TPR_20
Motif
Other DBs
NCBI-GeneID:
104347833
NCBI-ProteinID:
XP_009951272
LinkDB
All DBs
Position
Unknown
AA seq
1548 aa
AA seq
DB search
MSNKEVKAALKSAREAIRNKEYKEALKHCKAVLKQEKNNYNAWVFIGLAAAELGQPDQAK
GAYKKAIELEPNQLLAWQGLANLYEKSSQTGVKGDLADVYQKLLELYERGDKQKWCDVCN
KLVELYHQEKKYLEVAETWQKLIQVKQEEGAEKAELHQLWKKMIQLLKDSTENQDNKTEQ
SLLTAFENAVNSADAVPGEDHQNLYKDFIRCLSKFPHETTRLEEACNDMIALYPTVSYPL
EVLCLHFVQSGTFSEEALHCFSRLLEMDASSGPAIIGFGIKCLQEKKYKEAIKSLTEGLQ
KTSQCPAAWRYLAEAQMKIHKQRNAVLSCNQALEALGTPEGPSLQWKNLILQLKAEALIK
IADADAAEEAIKALEQIVNASSDPVVLAIKGRAYLNKGLVDQASKISQELLLSHPDLAES
HALEGFIHYSQKNYEQAERSFLNAIERKAEAAEYHQYLGLTYWFMSDETKKDKGKALTQF
LKAAKLDNYLGSVFYYLGNYYRDIAGDKSRARGCYKKAFELDGTDEESGTAAVDLSVELG
DMDTALSILNEVTEKARTGTAKWAWLHRGLYYLRTDRPSQAVADLQAAVRADPKDSNCWE
VLGEAYLSRGSYSTALKSFRKASELNPELVYSIYRAAAVEQILGKYENAIATYEQILKKT
EDYVPALKGLGECYLLLARSALDNYFDKKAMDYIEQALEFFTRATKHRPDVSCLWKLLGD
TCTSVHVISSAKVNIQVLGSLLGKNVGKQTLKKSELLSLGGRCYSKALKLMHLPSIWCDL
GINYYRQAEHLTAVGTDMNEISELLEKSLQCLKKAVRLHSKNHLYWNALGVVASCSAIGN
YALAQHSFIKSVQAEQINVVAWTNLGALYLATGNIEQAHEAFKVAQSLDPTYLLCWIGQA
LVAETIGSYDTMDLFRHTTELSMHNEGVKGYAHWVCSTLQDKSNRNTELYLYNIVQMNAI
PGAQVVLSKYTERNPDDASAFTMLGYLNEYLHLKRQAADAYERAASLLKNSEDTEKYNNA
MQNYARSLCALGQCDKAIEVYTSTPLTEFEGIVGLALAYFKKGLLQESIKAYEKALSVAE
SEQDKAHILTALAIIEYKQNKVDAAKTLLFKCSLKEPSTESLKALCTLGLVKQDATLATA
ALKELLKHEKGNDGIYERCLIVSAVYALQGRTVGVQREVSRAVHSNPGNPALWSLLSRVV
PLYASQKTKGGAAAGNIARALDVNHGKCHALEDEKNNPLKNIQKAIHLCPDNPAAWAVLM
AACHAENTVVCLNNTQPKRTDLEMTLVSTVSAKTGESNLPHSYIQTLEDWCLCQAITSLE
ETGKLSEAEALCTKGLKSCPDHPALFLLLRQVQCKQLLQSHKKLPDSILEELRKSVMTSS
ASVAAWQWLAKVYQSQGMMVGAEMCYRKSLQLASQQGSWNGKLSSLLRLAMLALEICMAK
VSNDHWPSLVQEATAEALKLSSCPLAALLQALLQYNRKMRARETRRLLERVVYQPGNPET
VVSVARWYLLRHLYAKDDYELIDVLIENAKANGDVRALELNEKLSSSA
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataaggaggtgaaggcagcattaaagagtgctagagaagcaatacgaaataaa
gaatataaggaagccttaaaacattgcaaggctgtcctgaagcaagaaaaaaataactac
aatgcttgggtgtttattggcctggcagctgctgagttagggcagcctgatcaagccaaa
ggagcatacaagaaagctattgaacttgaaccaaaccagttactggcatggcaggggtta
gcaaacttatatgagaaatccagccaaacaggtgtcaaaggagacttagcagatgtttac
caaaagctcttggaactctatgaaaggggtgacaagcagaaatggtgtgatgtgtgtaac
aagcttgtggaactatatcatcaagaaaagaaatatttagaggtggctgaaacatggcag
aaactaatacaagtgaaacaggaggaaggtgcagaaaaggcagagcttcatcagctttgg
aagaagatgatccagttgctgaaagatagtacagagaaccaggataataagactgagcag
tcgcttttgactgcgtttgaaaatgcagtgaactctgctgacgctgttcctggtgaagac
caccaaaatctttacaaggactttattcggtgcttgtcaaaatttcctcatgagacgact
aggttggaagaggcctgtaatgatatgatagctttgtatcctactgtgagttacccttta
gaagtactttgcctgcactttgttcaatcaggtactttctcagaagaggccctgcactgt
ttttctaggcttttggagatggatgcaagcagtggtccagccatcattggttttggtata
aaatgcctccaagaaaagaaatacaaggaggctattaagagtcttactgaaggtttgcag
aagactagccagtgtccagcagcatggcgttatttggcagaggcacagatgaaaattcac
aaacagaggaatgctgtcctgtcctgcaatcaagctcttgaggctcttggaactcctgag
ggtcctagtcttcagtggaagaatcttatccttcaattgaaagcagaggctttgataaaa
atagctgatgctgatgctgcagaagaagctattaaagcacttgagcagattgtgaatgca
agcagtgatccagtggttttagctatcaaaggccgggcttatctgaacaaaggtttagtg
gatcaagcttcaaagatctcacaagaacttctgttgtcccatcctgatctggctgagtcc
catgctctggagggtttcatccattattcccaaaagaactatgaacaggcagaaagaagt
tttctaaatgctattgaaagaaaggccgaagctgcagagtatcatcagtacctggggctc
acgtactggttcatgagtgatgagaccaaaaaagacaaaggaaaagcactcactcagttc
ttgaaggctgcaaaattggacaactacttgggaagtgtcttttattatttaggtaactac
tacagagacattgctggagacaaaagtagagctcgtggttgctataaaaaggcttttgaa
ctggatgggaccgatgaagaatctggaacagcagctgtagacttaagtgtggaactggga
gacatggacactgctctgtcaatcctgaatgaggtgacggaaaaagcgagaactggtaca
gcaaaatgggcctggcttcatcgtggactttactacctgagaactgatcggccgtcacaa
gcagtggctgatttgcaggcagctgtcagagctgatccaaaggattccaactgctgggag
gttctaggggaggcttacttgagcagaggtagctattcaacagctctaaaatccttcagg
aaagcaagtgagctgaacccagaactcgtgtacagcatttacagagctgcagcagttgag
cagattctaggcaaatatgaaaatgctatagctacctatgaacaaatcttaaagaagact
gaagattatgtgcctgcactgaaaggacttggtgagtgctatctcttgctggcaagatca
gcccttgataactattttgataagaaggccatggattacatagagcaggctcttgaattt
tttacaagggcaacaaagcaccgtcctgatgtatcttgcctctggaaactgcttggagat
acctgtactagtgtgcatgttatttcatcagccaaagtgaatattcaagttttaggatcc
cttctgggcaaaaatgtaggcaaacagacactgaagaaaagtgagctgctcagtctggga
ggaaggtgttacagcaaagctttaaaattgatgcatttgcctagcatatggtgtgatctt
ggaataaattattatcgacaagcagagcacctcacagcagtgggcactgacatgaatgag
atcagtgaactgctagagaagtctttacagtgtctcaaaaaagctgtgaggcttcacagc
aaaaatcatctttattggaatgcacttggtgtggttgcttcctgtagtgctattgggaat
tatgctcttgctcaacattcgttcatcaaatctgttcaagctgagcaaatcaatgttgtt
gcctggaccaacttgggggctttgtatctggcaactggaaacattgagcaagctcatgaa
gccttcaaggtagcccagtctctggaccctacttacttactgtgttggattgggcaggct
ctcgttgcagagacgataggcagctatgatactatggatctcttcagacacacaactgaa
ctcagcatgcataatgagggagtaaaaggctatgcccactgggtatgttcaacactgcag
gataaaagcaacagaaacaccgaactgtatctgtacaacattgttcaaatgaatgctatt
ccaggagcccaagtggtcttgagcaagtatacagaaagaaatccagatgatgcgtctgct
tttacaatgcttggttatttgaacgagtacctgcatctaaaaaggcaggcagcagatgcc
tatgaaagggcagcttcattgctgaaaaactctgaggatactgagaagtacaataatgca
atgcaaaactatgccaggtcactgtgtgcccttggccagtgtgataaggccattgaggtt
tacacatcaacacccctaactgagtttgaagggattgtggggctagcattagcctacttc
aagaaaggactcttgcaggaaagtatcaaagcctatgaaaaagccttgtctgttgctgag
tctgaacaagataaagcacatatcctgactgccttggcaataatagagtataaacagaac
aaagtagatgctgcaaagacacttctgtttaaatgctcactaaaggagcctagtacagaa
agtctgaaggctttgtgcacactgggattggtaaagcaggatgctacgcttgcaacagca
gccctgaaagaattactgaagcatgaaaaggggaacgatgggatttatgagaggtgcctt
attgtatctgctgtttatgcattgcaaggtaggactgtgggtgtccagagagaagtctcc
agagcagtacacagtaaccctggtaatcctgccctctggtctcttctgtctcgagtggta
ccactgtatgcatcacaaaagacaaaagggggagctgcagcgggaaacattgcacgtgca
cttgatgtaaaccatggaaagtgtcacgcgctagaagatgagaaaaacaatcctctgaaa
aatattcagaaggcaatccacctctgtccagataatcctgctgcctgggcagtgctaatg
gcagcctgtcatgctgaaaacactgttgtctgtctaaacaacactcagccaaagagaacg
gatctcgagatgacacttgtatctacagtttcagccaaaactggagaaagtaaccttcca
catagttatatccagactcttgaagactggtgtctgtgccaagctattaccagtctagag
gagactggtaaactctcagaagctgaagctctttgtaccaaggggttaaaaagctgccct
gatcatccagctctgtttctgcttttgagacaagttcagtgtaagcagctgttgcagtct
cacaaaaaacttccagacagcatcctggaggagcttcgcaagtcagtcatgaccagttca
gcttcagttgcagcttggcaatggctggcaaaagtgtatcagtctcaaggaatgatggtt
ggagcggagatgtgttacagaaagagtctgcagttggcgtcacagcagggcagctggaac
gggaagttatccagtctgctcaggctagctatgctcgcgctggaaatctgcatggctaaa
gtctcaaatgaccactggccatccttggttcaggaggcaacagctgaagctttgaaactt
tcttcttgccccctggcagctctccttcaagcactgctgcagtataatcgcaagatgaga
gcaagggagacgcgccgactgttggaaagagtagtttatcagccggggaatccagaaacc
gtagtgtcagtggcacgctggtacctcctgcgacatctgtatgccaaagatgattatgaa
ttaatagatgtgctcatagaaaatgccaaagctaatggagatgttagagctctggaactg
aatgagaaattgtcatcaagtgcctag
DBGET
integrated database retrieval system
