Leptosomus discolor (cuckoo roller): 104347920
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Entry
104347920 CDS
T08399
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
ldi
Leptosomus discolor (cuckoo roller)
Pathway
ldi05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
104347920 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ldi01001
]
104347920 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ldi04054
]
104347920 (CIITA)
Enzymes [BR:
ldi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
104347920 (CIITA)
Protein kinases [BR:
ldi01001
]
Serine/threonine kinases: Other
TAF1 family
104347920 (CIITA)
Pattern recognition receptors [BR:
ldi04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
104347920 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
NB-ARC
NPHP3_N
RsgA_GTPase
nSTAND_NTPase5
AAA_22
Motif
Other DBs
NCBI-GeneID:
104347920
NCBI-ProteinID:
XP_009951389
LinkDB
All DBs
Position
Unknown
AA seq
1067 aa
AA seq
DB search
MNLFKVFLPRVRKILSTATASDDHLMLNEDVISKEYPQALLHEKDREDLARKISLTFVEK
WDLYLNTLVPLCCLNLYGSKPQNMTDNDPAEANSKRQIMDSAFLSENGYLDLLHSDIDPL
HLYTLLDPKSSGNEAGHFSADPQADASNYDQSSSTDFLCTSENGENGDELYLCSNTTEAY
ARIAELVEYVLKDQQEKQVEDTFAGNLIVDEMAAENTEKFTDIKMQKCHKRTFLGSAESC
SGASEPKYKKIAEVPAVSAGNGSFLALPLNSHPASPTSLTNHHMSFPVPATNVLERSFII
PGSSAPLIPECPPVSVKGSQEYTGFADPPQQIFNFVLGNGTSDVIIYPVLTSSMETFISP
SFPVSLCGLEMFREVRVPIIPSEELLKRPKPVEAFCTSLMDYFRDMCKSVAMEREVTLDH
LFIDGTLVQSQTETKTGKNSVKAMEKELVTCSLQGKEKAALQRSQIFQIPGGKDLETKVI
VVLGKEGMGKSILVQKICQDWSNGEFSQFEFVFWFDCKQISLPEKRYSLKDLLLEFFVKP
QKGSKEIFEYILQNPAKVLLVFDGFEGLHDHENFPRYLDSRPEKDLCSIKELLSGLIQKK
ILNGCTLLLTARPKDKVYRYVSKVDKTIEIVGFSPQQRELYITKYFEGLPYCGNALKLIK
GCEYLFSHCYSPVMCRFVCFVCETILEMGDKSLPSTLTAVFLKFIQQKIIPMQTDVTAVQ
NQESLATLARTAWYLGEKHQSAMKSNLPSKEVKEFALKYGFFLPFAFPRHSDSGEEEFGS
TFSDFVIQNFLGALHLMLAEEIKDKSLTKYLSFPSKKKRPYNWLDLLPRFLAGLLFLQDD
PYFCSFSKKDVKPSTKKQKTFLKYIRRLQINELCPERLLELLHCIYETQSHYLLQHVTLR
LKPDLSFLGVVLTPPDVHVLHSVLKRSRKDFSLDLRNSSIDMQGLRDLVGLKNVASFRAS
LSDTVRLWKSLEQTKDYKLLRASTEKFVLDPFKAKTMKDISDLSELVELQEMMINCVQDA
TGCSSYEIPAIKNLRKLEFALGPVCGLQGFLKLVEILAAFPSLQHLE
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgaatctctttaaagtgttcctgcctagagtaaggaagattctttcaactgcaacggct
tctgatgaccacctcatgctgaatgaagatgtgatatccaaggagtaccctcaagccttg
ctgcatgaaaaagacagagaggacctcgcaaggaagatatctctgacatttgtggaaaaa
tgggacctatacttgaacactttggttcccctctgttgtttaaacctctatggcagtaag
cctcaaaatatgacagataatgacccagcggaagcaaacagcaagagacaaatcatggat
tcagcatttctgtctgaaaatgggtatcttgatttgctgcacagtgatattgatccattg
catctgtatactctccttgatcctaagtcatctggaaatgaagcaggtcacttctctgca
gatcctcaagctgatgccagcaactatgatcagtccagtagtacagattttctatgtacg
tcggaaaatggtgaaaatggggatgaactgtatctctgttccaacaccaccgaagcttat
gctagaatagctgaattagtagaatatgtgctcaaggatcagcaggagaaacaggtggaa
gacacttttgcagggaaccttattgtggatgaaatggctgctgaaaacactgaaaaattt
actgacataaagatgcagaaatgtcacaaacgaaccttcttaggctcagcagagagttgc
tctggtgcttcagaacccaaatacaagaaaattgcagaagtccctgcggtgtctgcaggg
aatgggagtttcttagctctgcctctcaacagccatccagctagccccacctcactaact
aaccaccacatgtcctttcctgttcctgctactaatgtgttggaaagaagtttcataatt
cctggatcttcagcacctttgattccagagtgtccacctgtcagtgtgaaaggaagccaa
gagtatacaggctttgcagatcctccgcagcagatatttaactttgttcttggaaatggc
acatctgatgttataatatatccagtgctgacttcttccatggaaacatttatatctcca
agttttccagttagtttatgtggtttagaaatgttcagagaagtccgagttcccataatt
ccttctgaagaactgctcaaaagaccaaagccagtggaagctttctgtacatcacttatg
gattatttccgggacatgtgcaaatctgtggccatggagcgtgaagtaactcttgatcac
ttgtttattgatggaacacttgttcaaagccaaactgaaaccaaaactgggaagaatagt
gtaaaggcaatggaaaaggagctggtaacttgcagtctgcaagggaaggaaaaggcagcc
cttcaaagaagccaaatatttcaaattccaggaggtaaagacttagagactaaagtgatt
gttgtgctgggaaaagaaggaatgggtaaaagcattcttgttcagaagatctgccaggac
tggtccaatggagagttttctcaatttgaatttgtgttttggtttgactgcaaacaaata
agcttgcctgagaagcgatacagcctgaaggatctgcttcttgaattttttgtaaaacct
caaaagggaagcaaagagatctttgagtatatattgcaaaatcctgctaaagtccttctg
gtttttgatggttttgaagggttgcatgatcatgagaattttcctcgttacttggacagc
cggcctgaaaaagacttgtgcagtataaaggagctgctttcaggactcatccaaaaaaag
atactcaatggttgtactttattacttacagcaagaccaaaagacaaggtgtaccggtat
gtgtccaaagtggataagactattgaaatagtaggattttcccctcagcagagagaattg
tacataaccaagtactttgaaggattgccctactgtggtaatgcactgaaattaatcaaa
gggtgtgagtacttgttcagtcattgttacagccctgttatgtgtagatttgtttgtttt
gtctgtgagacaatacttgaaatgggagacaaaagccttccttcaactcttactgcagtc
ttcctgaaatttattcagcaaaagataatacctatgcaaacagatgttacagctgtgcaa
aatcaagagagtcttgctacactagcccgtacagcctggtatcttggagaaaagcaccaa
agtgccatgaaaagcaatcttccttctaaggaagttaaagagtttgctctgaaatatgga
ttttttctgccatttgcattccccagacattcagatagtggagaagaggaatttgggagc
acattctccgattttgtcattcagaatttcttgggtgcacttcaccttatgttagcagaa
gagatcaaggataaaagtctaacaaagtacctgtcttttccatccaagaagaaaagacct
tataactggttagatttattgcctcgatttttggctggattgttgttcctccaggatgac
ccctacttctgctccttttcaaaaaaggatgtaaaaccatcaaccaagaagcagaaaaca
ttcttgaaatatattagaaggctgcagataaatgagctctgtccggagaggttacttgag
cttttacattgtatttacgaaacacaaagccattaccttttgcagcatgtgaccttaagg
ctcaagccagacctgtcttttctgggtgtagttcttacaccacctgatgtccatgtactg
cactctgttttaaaaaggtcaagaaaagacttttccttggatttgcgaaacagcagcatt
gacatgcaagggctaagagacttggttggcctaaagaatgtggcatcattcagggcctcc
ctcagtgatacagtcaggctctggaaatctttagaacagacaaaagactacaaactgctg
agagcatcaacagagaaatttgtccttgatccctttaaggcaaagacaatgaaggacatc
agtgacctttcagaacttgtagagctgcaggagatgatgatcaactgtgtgcaagatgca
actggttgcagcagctatgaaattcctgccatcaaaaacctcagaaaactagaatttgca
ctgggtccagtatgtggccttcagggattcctaaaacttgtggaaattcttgcagcattt
ccatcacttcagcatttagagtga
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