Leptosomus discolor (cuckoo roller): 104347939
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Entry
104347939 CDS
T08399
Symbol
EFTUD1
Name
(RefSeq) elongation factor Tu GTP-binding domain-containing protein 1 isoform X1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
ldi
Leptosomus discolor (cuckoo roller)
Pathway
ldi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104347939 (EFTUD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ldi03009
]
104347939 (EFTUD1)
Ribosome biogenesis [BR:
ldi03009
]
Eukaryotic type
Pre-60S particles
GTPases
104347939 (EFTUD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
EF-G_D2
GTP_EFTU_D2
EFG_IV
MMR_HSR1
SSXT
Motif
Other DBs
NCBI-GeneID:
104347939
NCBI-ProteinID:
XP_009951416
LinkDB
All DBs
Position
Unknown
AA seq
1137 aa
AA seq
DB search
MVLTSVEKMVSLQKKTSGIRNICILAHVDHGKTTLADCLISSNGIISSRLAGKLRYLDSR
EDEQIRGITMKSSAISLHFVKGDQEYLINLIDSPGHVDFSSEVSTAVRLCDGCIIVVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKIDRLIVELKLTPQEAYLHLKNILEQINAVTGAL
FTSKVLEERAEKETESESISDTAPGDQVYDWSAGLEDTDDSHLYFSPDHGNVVFASAIDG
WGFGIEHFAKLYSQKIGIKPAVLLKTLWGDYYLNTKAKKIMKGDQSKGKKPLFVQLVLDN
IWSLYEAVMKRDKEKIEKIVTSLGLKIGARESRHADPKVHLNAICSQWLPISDAVLSMVC
SKLPSPLDITAERVEKLMCVGARTFDSLPPETQELKSAFMKCSSEGTAPVIVFVSKMFAV
DAKALPHNKPRPLTQEEIAHRRELAKRRHAEKLAANQGKELSEKPPSENSSEVTDNTGDM
KGEEQQVTGGSVKQEADNKESFIAFARVFSGVVQRGQKIFVLGPKYDPAEVLHKVRDDSK
PYYLSSAANDLPLVPHMTSCTLENLYLLMGRELEDLEEVPAGNVLGIGGLQDFVLKSATL
STSPACPPFTPLNFEATPIVRVAVEPKHPSDMPQLVRGMKLLNQADPCVQVLIQETGEHV
LVTAGEVHLQRCLDDLKERFAKVQISVSAPIIPFRETITRPPKVDMVNEEIGKQQKVAVI
HQTKEDQNKIPEGIQVDSDGLVTISTPNKQATLSVRAVPLPEEVTRLLEENSDLIRTMEQ
LNTSLNEDKKTHEINQKTLDRIREFKQKLEQNLQGRKWRNAVDQIWSFGPRKCGPNILLY
NFEGYKRSVWQCLGNTVKEVSKYRDFDNSIVSGFQLATLSGPMCEEPLMGVCFTVEKWEI
SKVGEMLSTSSQDSGERDAIEHKQNEDITLTSSCTGEVCRVNEDEDSSQSVPKSPEKISK
HKGEVLLADCYGPFSGQLIATMKEACRYALQGKPQRLMAAMYTCEIMATAEVLGRVYAVL
SKREGRVLQEEMKEGTDVFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEMISSD
PFWVPTTEEEYLHFGEKADSENQARKYMNAVRKRKGLYVEEKIVEHAEKQRTLSRNK
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atggtcctcacaagcgtggaaaagatggttagtctccagaagaagacttctgggatcagg
aatatctgtatattagctcatgtggatcatggcaaaacaactctagctgattgtcttata
tctagcaatggaataatctctagccgcttggcaggaaagctgagatatctagacagtaga
gaagatgaacagatccgaggaataacaatgaaatctagtgcaatttcattgcactttgtg
aaaggtgatcaggagtatctgattaatttaatagactccccagggcacgtggatttttct
tcagaagtatctactgctgtccgactctgtgatggttgcatcatagtggtggatgctgtt
gaaggagtctgtccacagactcaagcagttctacggcaagcgtggctagaaaatatacgt
ccagtattggtgattaataaaatcgatcgcttgattgtggagctcaagctgacccctcag
gaagcatacttgcaccttaagaatatcttagaacagatcaatgcagtcactggagcactc
tttacctctaaagtcttagaagaaagagctgagaaagaaacagaaagtgaaagtatttca
gacactgcaccaggagatcaagtttatgactggagtgctggattggaagatactgatgat
tcacatctttatttttcaccagaccatggaaatgtggtgtttgccagtgcaattgatggc
tggggttttggcattgagcattttgccaaactgtacagccaaaagattggaatcaagcct
gcagtacttctgaagactttatggggagattattatctaaatacaaaagcaaagaagata
atgaaaggtgatcagtcaaaaggaaagaaacctttgtttgtgcaactggtgctggacaac
atatggagtctgtatgaagctgttatgaaaagagacaaagaaaaaattgaaaagatagtc
acctctttgggattgaaaattggtgcaagggagtcacgacatgcagaccctaaagttcat
cttaatgccatttgtagccagtggctaccaatttctgatgcagtcctctccatggtgtgt
agtaaacttcccagtcctcttgacatcactgcagagagagtggaaaagctgatgtgtgtt
ggagctagaacatttgattctttaccaccagaaactcaggaactgaaaagtgcttttatg
aaatgcagtagtgaaggaacagccccagttattgtctttgtttccaaaatgtttgctgtt
gatgcaaaggcattaccacacaataaaccaaggcctttaactcaagaagaaattgctcat
cggcgtgaacttgcaaaacgaaggcatgcagaaaaattggcagcaaatcaaggaaaggag
ctgtcagaaaagcccccaagtgaaaattcatctgaagtaactgataacactggtgatatg
aaaggtgaagagcaacaggtcaccggtggttcagtgaaacaggaagcagacaacaaggag
tctttcattgcttttgctagagtgttcagtggcgtggtgcaaagagggcaaaagatcttt
gttttaggaccaaaatacgatcctgctgaggttttgcataaggtaagagatgacagtaaa
ccatattacttgagttctgctgcaaatgatctgccgttagtaccacatatgacttcctgt
acattggagaatctctacttgcttatgggaagagaacttgaagatcttgaagaagtacct
gcaggaaatgttctgggaataggaggcctgcaagattttgtgctaaagtctgcaacactg
tcaacatctccagcttgtccaccatttacccctctcaactttgaagccacaccaatcgtg
cgggtagctgttgaaccaaaacatccaagtgatatgcctcagctggtcagaggaatgaag
cttttaaaccaagctgatccatgtgtacaagttttaatccaggagacaggagagcatgtg
ctagtgacagcaggagaagttcatcttcagcgttgcttggatgacctgaaagaaaggttt
gcaaaggtacagattagtgtatcggcacctattataccgttcagagagacgataacaaga
ccgccgaaagttgatatggtgaacgaagaaatagggaaacagcagaaagttgctgtcata
caccaaacaaaagaggaccaaaataaaattcctgaaggaatccaggtcgattcagatggg
cttgttacaatatctactccaaataaacaagcgactctcagcgtaagagcagtgccactt
cctgaggaggtaactcgacttcttgaagaaaacagtgacttaattcgaactatggagcaa
ctcaacacatctctgaatgaagataaaaaaacccatgagataaatcagaagactctggat
aggatcagggaattcaaacaaaagttggagcaaaatctgcagggaagaaagtggagaaac
gctgttgatcagatctggtcatttggaccacggaagtgtgggcctaatattttgttatat
aattttgagggctataaaaggtctgtgtggcagtgccttgggaacactgtgaaagaagta
agtaaatacagagactttgacaacagcatagtaagtggatttcagctggctacgctttca
ggtcccatgtgtgaagaacccctcatgggtgtttgctttacagtggaaaaatgggaaata
agtaaagttggagagatgctgtcaacaagtagtcaggattcaggggaacgtgatgccata
gaacataaacaaaatgaagatattactctaacaagcagttgcactggtgaagtttgcaga
gtgaatgaagacgaggacagcagtcaaagtgttccaaaatcacctgagaaaattagtaaa
cacaagggagaagttttacttgcagattgttatggtcccttctctggacaactcattgcc
accatgaaggaagcttgtcgttatgctttgcaaggaaaacctcagaggcttatggcagca
atgtacacgtgtgaaattatggctactgcagaagttttaggtcgtgtgtatgctgtcttg
tccaaaagagaaggcagagtgttacaagaggagatgaaagaggggacggatgtgtttatt
attaaggcagtcctgccagtagcagaaagctttggttttgctgatgaaatcaggaagaga
accagtggcctggccagtccgcagctggtgttcagccactgggagatgatttcaagtgac
ccattctgggtaccgaccactgaggaagaatatttgcactttggggaaaaggcagactca
gagaaccaggcccgcaagtacatgaatgcagtaagaaagcgaaagggactttatgtagaa
gaaaaaattgtggagcatgctgaaaagcaaagaactctcagtagaaataagtag
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