Leptosomus discolor (cuckoo roller): 104348325
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Entry
104348325 CDS
T08399
Symbol
CPSF2
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
ldi
Leptosomus discolor (cuckoo roller)
Pathway
ldi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104348325 (CPSF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ldi03019
]
104348325 (CPSF2)
Messenger RNA biogenesis [BR:
ldi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
104348325 (CPSF2)
U7-dependent histone pre-mRNA processing factors
104348325 (CPSF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
104348325
NCBI-ProteinID:
XP_009951887
UniProt:
A0A091Q0T3
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MTSIIKLTTLSGVQEESALCYLLQVDEFRFLLDCGWDENFSMDIIDSLRKHVHQVDAVLL
SHPDPLHLGALPYAVGKMGLNCAIYATIPVYKMGQMFMYDLYQSRHNTEDFTLFTLDDVD
AAFDKIQQLKFSQIVNLKGKGHGLSITPLPAGHMIGGTIWKIVKDGEEEIVYAVDFNHKR
EIHLNGCSLEMLSRPSLLITDSFNATYVQPRRKQRDEQLLTNVLETLRGDGNVLIAVDTA
GRVLELAQLLDQIWRTKDAGLGVYSLALLNNVSYNVVEFSKSQVEWMSDKLMRCFEDKRN
NPFQFRHLSLCHSLSDLARVPSPKVVLASQPDLECGFSRDLFIQWCQDSKNSIILTYRTT
PGTLARFLIDNPSEKVIDIELRKRVKLEGKELEEYLEKEKLKKEAAKKLEQSKEADIDSS
DESDAEEDIDQPTVHKTKHDLMMKGEGSRKGSFFKQAKKSYPMFPAPEERIKWDEYGEII
KPEDFLVPELQATEEEKSKLESGLTNGEEPMDQDLSDVPTKCISATESMEIKARVTYIDY
EGRSDGDSIKKIINQMKPRQLVIVHGPPEASQDLAECCRAFGGKDIKVYMPKLHETVDAT
SETHIYQVRLKDSLVSSLQFCKAKDAELAWIDGVLDMRVSKVDTGVILEEGELREDEDLE
MQVDMPTSDSSVIAQQKAMKSLFGDDDKEMCEESEIIPTLEPLPPHEVLGHQSVFMNEPR
LSDFKQVLLREGIQAEFVGGVLVCNNLVAVRRTETGRIGLEGCLCQDFYRIRDLLYEQYA
IV
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgattatcaagttgactacactttcaggggtgcaggaggaatctgccctttgc
tatctgttgcaagtagatgaatttcgttttcttttggactgtggctgggatgaaaacttt
tctatggatattattgattctctaaggaaacatgtacatcaagttgatgctgttcttctt
tctcatcctgaccctctacaccttggtgctcttccatacgcagttggaaaaatggggttg
aattgtgccatttatgcaactattcctgtgtataaaatgggacagatgtttatgtatgat
ctctaccagtcccgccataatactgaagatttcacactctttacattggatgatgtagat
gcagcctttgataagatacaacagctgaagttttctcagattgtgaacttgaaaggcaaa
ggacatggtttatcaatcacgccgttgccagctggacacatgataggaggcacgatttgg
aagattgtcaaggatggagaggaagaaattgtttatgcagttgacttcaaccacaagagg
gagatccatctgaatggatgttccttggaaatgttgagcaggccttcattgctcattaca
gattcatttaatgctacttatgtacaacccaggaggaaacaaagggatgaacagctactg
actaatgttttggagacgttaagaggtgatggaaatgtattaatagccgtggatacagca
ggcagagttctggaacttgctcaacttcttgatcagatctggagaacgaaagatgcagga
ttaggagtctactctctagcactcttgaataacgtcagctacaatgtggtggagttctct
aaatcacaggttgaatggatgagcgacaagttgatgaggtgctttgaagacaagagaaac
aatccttttcagttccgccatctctccttatgtcatagtctgtctgatctggctcgagtg
cctagtccaaaagttgtccttgctagccagcctgacttagaatgtgggttttctagagat
cttttcattcagtggtgccaggattccaaaaactctataattttaacttaccgcactaca
cctggaacattagcacgattcctgattgataatccttctgaaaaagttatagatattgag
ttgagaaaacgtgtcaagttggaaggaaaagaacttgaagaatacctagaaaaggagaaa
ctaaagaaagaagcagctaagaagttagaacagtctaaagaggcagatattgattccagt
gatgagagtgacgctgaagaggatattgatcagccaactgtacataagacaaaacatgat
ttgatgatgaaaggtgaaggtagccggaaaggaagcttcttcaaacaggcaaagaaatct
tatccaatgtttccggcccctgaagaaagaattaaatgggatgaatatggcgagattatc
aaacctgaggattttctagttcctgaactccaagcaacagaagaagaaaaaagcaaatta
gaatctggtttgacaaatggagaagaacccatggaccaggatttatcagatgttcctacc
aaatgcatttctgcaacagaatccatggaaattaaagccagagttacttacattgactat
gaaggacgctcagatggggactcaattaaaaaaattattaaccaaatgaaaccaagacaa
ctggtcattgttcacggaccacctgaggccagtcaggaccttgcagaatgttgccgagcc
tttggtggaaaagatattaaagtttacatgccaaaactgcatgaaactgtagatgcaacc
agcgaaactcacatttaccaggtcaggttaaaagattctcttgtcagctcccttcaattt
tgtaaagccaaggatgctgagttggcttggatagatggtgttctggacatgcgggtttca
aaagtggatactggagttattttggaagagggagagttgagggaagatgaagacttagag
atgcaagtggatatgcctacttcagactctagtgtcatcgcacaacagaaggccatgaaa
agcctcttcggtgatgatgacaaggagatgtgtgaggagagcgagatcattcctactctg
gaacctctgccacctcatgaggttcttggacaccaatctgtgtttatgaatgagccaaga
ctgtctgacttcaagcaagttctcttgcgagaaggtatacaagctgaatttgtaggagga
gtgcttgtgtgcaacaatctggtggctgttcgcaggactgaaacagggcgcattggattg
gaaggctgtctctgtcaggacttctataggataagagaccttttatacgagcaatacgct
attgtctaa
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