Leptosomus discolor (cuckoo roller): 104348636
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Entry
104348636 CDS
T08399
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ldi
Leptosomus discolor (cuckoo roller)
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ldi03016
]
104348636 (TRUB1)
Enzymes [BR:
ldi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
104348636 (TRUB1)
Transfer RNA biogenesis [BR:
ldi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
104348636 (TRUB1)
Prokaryotic type
104348636 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
DMA
Motif
Other DBs
NCBI-GeneID:
104348636
NCBI-ProteinID:
XP_009952272
LinkDB
All DBs
Position
Unknown
AA seq
262 aa
AA seq
DB search
MGIYSSNLGFWALADEVRTYFQTEAGVQTSGNKRNHHVLKIGHGGTLDSAATGVLVVGIG
KGTKMLRTMLAGSKKYTAVGLLGKGTDTLDATGKVTEEKPYDQITKGDLEKVLQKFTGDI
MQVPPLYSALKKDGERLSTLMKRGEAVEAKPARPVRVYSLSLQQFQPPLFTLDVECGGGF
YVRSLVSDIGKELSTCATMQELTRTKHGPFTLEEHALYEDKWTIDEIARSLEHCTSLLPG
EPSHKKLKTEHPGETAVSCEDK
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggggatttattcatctaatctgggcttttgggcacttgctgatgaggtgagaacgtac
tttcagactgaagctggcgtgcaaacaagtgggaacaaaagaaatcatcacgttttgaaa
attggacatggtggaactttggacagtgcagccacaggagttctggtggttggtattgga
aaaggaacaaaaatgctgagaactatgttggcaggttccaagaagtacactgctgttgga
ctattgggcaaaggtaccgatacattagacgctacaggaaaagtaactgaagaaaaacct
tatgaccagataacaaaaggagatcttgaaaaggtgcttcaaaagttcacaggggacata
atgcaggttcctccactctattctgctttgaagaaggatggagaaaggctatcaactctg
atgaagagaggagaagcagtcgaagcaaagcctgctcggccagtaagagtgtacagcctc
tctctccagcagttccagccaccactcttcacactggatgttgaatgtggtggtggcttt
tatgtcaggagcctggtcagtgacattggcaaagagctctctacctgtgccacaatgcaa
gagctgacccgaaccaaacatgggccatttacgctagaggagcatgccctttatgaagac
aaatggacaattgatgaaattgcacgatccttagagcattgcacatctctcctcccagga
gagccatctcataaaaaattgaagacagagcatcctggtgaaactgctgtgagctgtgaa
gataagtga
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