Leptosomus discolor (cuckoo roller): 104348688
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Entry
104348688 CDS
T08399
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H-like
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
ldi
Leptosomus discolor (cuckoo roller)
Pathway
ldi04010
MAPK signaling pathway
ldi04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
104348688
04020 Calcium signaling pathway
104348688
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ldi04040
]
104348688
Ion channels [BR:
ldi04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
104348688
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Dae2
YVC1_C
Motif
Other DBs
NCBI-GeneID:
104348688
NCBI-ProteinID:
XP_009952334
LinkDB
All DBs
Position
Unknown
AA seq
1742 aa
AA seq
DB search
MRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDRNFAMTYNLTFL
HPYYRTDEAEENPFICSSHRENGMQKCSNIPNRKEYKVEFYTTLTSAAXXXXINWNQYYN
VCMAGDVNPHNGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIV
GSFFMINLCLVVIATQFSETKQRENQLMQEQRARYLSNDSTIASFSEPGSCYEELLKYIC
HIFRKVKRRTIRLYNNWQSKRRKKVNPNGTTNGQSHRGKKRITSIHHLIHHHHHHHHHHY
HISNGSPRGPRSNPEICDLELKVMKPGGQLMLPSPSPNLQSPAPPPDSESVHSIYHADCH
VEGPQVNCKSSNAPASIKLTAGLSNHGNMNYPTILPSPTSKASSVPVPKGKKNGNSPVAV
VNSPVNLGTDSYGKLQQLVGEHGLRRTPSRLSGLSVACPSPPGGTLTCELQDCPFCASLL
EDPEFAFSETDSCDSDSNGVYEFTQDLRHGDHRDQLQQQRGRRRRKKKKPKERNKVTRLW
KAFGSKLKRIVESKYFNRGIMIAILINTLSMGIEYHEQPDELTNALEISNIVFTSMFALE
MLLKLLAFGLFGYIKNPYNIFDGIIVVISVWEIIGQSDGGLSVLRTFRLLRVLKLVRFMP
ALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTDTGDTVPDRKNFDS
LLWAIVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVEGFQ
AEVRDLSRGREKTEKDMPSYLASASHGDQCSLLVVEVDVLAINLGDANRSDTDEDKTSAN
FDDDFEKLKDLRATEMKMYSLAVTPNGHLEGRGSMPPPIIMRTAATPMPTPKCSPHMDSV
HSFVDSRRGSNASLDPLSYDQKSLSSLRSSPCANWGTNSNWGSRRSSWNSLGRAPSLKKK
NQSGERESLLSGEGKGSTDDDSDDAKSSTVSRPSLHRRAESLDYRSSLDLPELLQLPTMR
HSLSISPVAVLPAEYQDCNGKMVHVPSEFFLRVDSHKEDALDYEDDMEDVSLGEADWALP
YKPQWCKSHEDWSLYLFSPQNRFRVMCQKVIAHKMFDHVVLVFIFLNCITIALERPDIDP
HSTERIFLSVSNYIFTAIFVAEMMVKVVALGFFSGENTYLQSSWNVLDGVLVFVSIIDII
VSMASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLISSLRPIGNIVLICCAF
FIIFGILGVQLFKGKFYYCDGPDVKNITTKTDCANARYKWVRRKYNFDNLGQALMSLFVL
SSKDGWVNIMYDGLDAVGIDQQPIQNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHK
CRQHQEAEEARRREEKRLRRLEKKRRKAQRRPYYADYSPARKYIHTLCTSHYLDLFITFI
IGVNVITMSMEHYNQPKSLDEALKYCNYVFTIVFVFEAVLKLVAFGFRRFFKDRWNQLDL
AIVLLSIVGITLEEIEMNAALPINPTIIRIMRVLRIARVLKLLKMATGMRALLDTVVQAL
PQVGNLGLLFMLLFFIYAALGVELFGKLDCSEENPCEGLSRHATFTNFGMAFLTLFRVST
GDNWNGIMKDTLRECTREDKHCLSYLPVISPVYFVTFVLIAQFVLVNVVVAVLMKHLEES
NKEAKEDAEMDAEIELEMSRGATTSATGGSRGGAVAPESRAPYRSQETVKSESAVQVKHQ
AL
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atgcgaatactcgtcaccctgctgttagatactctgcctatgttaggcaacgtcctcctc
ttgtgcttctttgtcttcttcatctttgggattgtcggtgtgcagctctgggcagggctg
ctgagaaacagatgtttcctagacaggaattttgcaatgacatacaaccttaccttcctg
catccgtactaccggacagacgaagcggaggagaacccattcatctgctcatcgcatcgt
gaaaacggcatgcagaaatgctccaacatcccaaacaggaaggagtacaaggtggagttt
tatacaaccctgacttcagcagcnnnnnnnnnnnncataaactggaaccagtattacaac
gtatgcatggcaggggacgtaaacccacacaacggagctatcaattttgataatattgga
tatgcctggatagctatttttcaggttataaccctggaaggatgggttgacatcatgtat
tatgtgatggatgcacattctttttacaattttatatattttatattgcttataatagtt
ggttccttcttcatgattaacctgtgcctggttgtgatagcaacacagttttctgaaaca
aagcagcgagagaaccagctgatgcaggagcagcgggcccgttatctctcgaatgacagc
acaattgccagcttctcggagccaggtagctgctacgaggagctgctcaagtacatctgc
cacatcttcaggaaggtgaaacggcggacaatacgcctgtacaataactggcagagtaag
cgccggaaaaaagttaaccccaacggcaccacaaacgggcaaagccaccgaggcaaaaag
cgcatcacctccatacaccacctcatccaccatcaccatcaccaccaccaccaccactat
cacatcagcaatgggagccctcgggggccacgctccaaccctgagatctgcgacctggag
ctgaaggtcatgaagcctggaggccaattgatgcttccttctccatcacccaacttgcag
agccctgctcctcctccagattcggagtctgtgcacagcatttaccacgcagactgtcat
gttgaaggaccacaagtgaactgtaagtcttccaatgcccctgcaagcattaaactgact
gctggactctccaaccatggcaacatgaactatcctaccatcctgccttctccaactagc
aaagccagctctgttccggttcccaaaggaaagaagaacggcaattcacctgtggccgtg
gttaatagccctgtaaatttgggcacggattcctatgggaagctgcagcaactggtagga
gagcatggtctgcggcggacgcccagccggctgtcggggctgagcgtggcctgccccagc
ccgccgggcggcacgctgacctgcgagctgcaggactgtcccttctgcgccagcctcctg
gaggaccccgagttcgccttcagcgagaccgacagctgcgactccgacagcaacggcgtc
tacgagttcacccaggacctgcggcacggcgaccacagagaccagctccagcagcagcgg
ggcaggaggagaaggaagaagaaaaaacccaaggagaggaacaaggtgacccgcctgtgg
aaggcttttggcagcaagctgaagaggatcgtggagagcaagtacttcaaccgggggatt
atgatagccattctcatcaacacgctgagcatgggcatcgagtaccacgagcagccggat
gagttgaccaacgccttggagatcagtaacatcgtcttcacaagcatgtttgccctggag
atgctcctgaaactccttgcctttggcctcttcggctacatcaagaacccgtacaacatc
tttgacgggatcatagttgtcatcagcgtctgggagatcatcggccagtcggacggaggc
ctctctgtgctacgaacttttcggttgctccgggtgctgaaactggtgcgtttcatgcct
gccctccgtcgccagttggtggtcctgatgaagacgatggacaatgtggccaccttctgc
atgctgctcatgctcttcatctttatcttcagcattctcggcatgcatctttttggatgc
aagttcagcctgaaaactgatacaggagacacagttccagatagaaaaaattttgattcc
ttactatgggccattgtgactgtatttcagatcctcactcaagaggactggaacgtggtc
ctgtacaatgggatggcgtctacatcctcctgggcagctctctactttgtggccctgatg
accttcggcaattatgtgctcttcaaccttcttgttgccattctggtagaaggcttccag
gcagaggtaagagatctgagcagaggaagggagaaaactgagaaggacatgccttcgtat
ctagccagtgctagtcatggggaccagtgcagcctgttggtggtggaggtggacgtttta
gccatcaacctaggtgatgccaataggtcagacacagatgaggacaagacatcagccaac
ttcgatgatgattttgagaagctaaaggacctccgagcaacagagatgaagatgtactca
cttgctgtcaccccaaatggacacctggagggcaggggaagcatgccacctcctataatc
atgcgcactgctgccacaccaatgcccacgccaaagtgttccccacacatggattcagtg
cacagtttcgtggactcgaggagaggcagtaacgcttcactagaccccttgagctacgat
cagaagtccttgtccagcctccgcagttccccttgcgccaactggggcaccaacagcaac
tggggaagccgacgctcgagctggaatagcctgggcagagctccgagcctcaagaagaag
aaccagtcaggagaaagagagtccttgctctccggggagggaaaaggcagcacagacgat
gactccgacgacgccaagtccagcacagtcagcaggccctcgttgcaccgccgggcagag
tccctggactaccgcagctccctggacctgcctgagctgctccagttgcccacgatgcgc
cactcgctcagtatcagccctgtggccgttctgcctgccgagtaccaagactgcaacggc
aagatggttcacgtccccagcgagttcttcctgcgcgtcgacagccacaaggaggatgcc
ttggactatgaggatgacatggaggatgtgagtttgggggaggcagattgggcactcccc
tacaagccacagtggtgcaagagtcatgaagactggtcgctctacttgttttccccgcag
aatcggttccgagtaatgtgccagaaggtcattgcccacaaaatgtttgatcacgtggtg
ctggtcttcatatttctcaactgcatcactatagcactggagcgaccagacatagaccca
cacagcacggaaaggatattcctaagtgtttctaattacatcttcactgcaatctttgtg
gctgaaatgatggttaaggtggtagcccttggcttcttctctggggagaacacctatctg
cagagcagctggaatgtcctggatggagtcctggtctttgtgtctatcattgacattatt
gtctccatggcatcggcaggcggagcgaagatcctgggtgtccttcgtgttctgagactt
ctgcggaccttgagacctctccgagtcatcagcagagccccaggtctgaagctggtggta
gaaaccttgatctcctccttgaggcctattgggaatattgttctcatctgctgtgctttc
ttcattatctttggaattttaggggtccagctttttaaaggcaagttctactactgtgat
ggtcctgatgtcaaaaacatcactaccaagactgattgcgctaacgcacgctacaaatgg
gttcggcggaagtacaattttgacaatttgggacaggccctcatgtccttgtttgtcctc
tcctccaaagacggctgggtgaacatcatgtacgatggtttggatgccgtgggtattgac
caacagcccatccagaaccataacccttggatgcttctctacttcatctccttcctgctc
atcgtcagcttcttcgtgctcaacatgtttgtgggggtggtggtggagaactttcacaag
tgccggcagcaccaggaggcagaggaggcccggcgtcgggaggagaagcggctgagacgc
ttggagaaaaagcgcaggaaagcccagcgcaggccttactacgctgactattccccagca
cggaagtacattcacaccctctgcaccagccactatcttgacctcttcatcaccttcatc
attggggtcaatgtcatcactatgtcgatggagcactacaaccagccaaagtccctggat
gaagccctgaagtactgcaactatgtgttcaccatagtttttgtgttcgaggcagttctg
aagttggtggcttttggttttcgaaggttctttaaggacaggtggaatcagctggatttg
gccatagttctcttgtcaattgtgggaatcacgctggaggaaattgagatgaatgctgca
ctgcccatcaatcccacaataatacgcatcatgcgggtgctgagaatagccagagtgctg
aaactgcttaaaatggccactgggatgcgagctctcctggacacagtggtacaagcactt
ccccaggtagggaaccttggcctactttttatgctcctgttttttatctatgctgccctg
ggagtggaattgtttggcaagctagactgcagtgaagaaaatccttgcgaaggtctgagc
cggcatgcaactttcaccaactttggcatggcctttctcaccctcttcagggtgtcaaca
ggggacaactggaacggtatcatgaaggacactctccgggaatgcactcgggaagacaag
cactgcctcagttacctgcctgttatctcgccagtctacttcgtcaccttcgtcctcatc
gcgcagttcgtcctagtcaacgtggtggtggcagtgctgatgaagcacttggaggagagc
aacaaggaggccaaggaggatgctgagatggatgctgagatcgagttggagatgtccaga
ggagcaaccacctcggccaccggtgggagcaggggaggtgcagtggccccggagagcagg
gcaccctacagaagtcaggagaccgtgaagtcagagtcagcggtgcaggtgaagcaccaa
gccctg
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integrated database retrieval system
