Leptosomus discolor (cuckoo roller): 104349046
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Entry
104349046 CDS
T08399
Name
(RefSeq) intraflagellar transport protein 140 homolog
KO
K19672
intraflagellar transport protein 140
Organism
ldi
Leptosomus discolor (cuckoo roller)
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ldi03037
]
104349046
Cilium and associated proteins [BR:
ldi03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex A
104349046
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT140_1st
Beta-prop_IFT140_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_EML
WD40_Prp19
WDR55
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_ELP1_2nd
WD40_MABP1-WDR62_1st
EIF3I
Motif
Other DBs
NCBI-GeneID:
104349046
NCBI-ProteinID:
XP_009952766
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MAVYVDHRTQAPDSVASPSHIAWHPLHPLLAVGSISTTPGGCVDIYLEQGEHVSDAHVER
SFQVTSLSWHPSRQILAAGWEMGEVVILNKQDKEQHTVPPNHNAKIAVLNWSTNGTCLVS
GDEHGVLVLWRMDQRGRVQGPALLKQEYGKCLSHCVFRPPPPGEDFVQLAKAAVSGDEKA
LDMFNWRKAGTGAPLKMGLQEGLSFFITLTDGSVHCVNEKGKTRHVLSTDSLVQKLLYME
KRDVLVVITDNLQLSLHAITLEGEAEELMKVKLSGKIGHSADIILIDHSLVVTALGETVI
RFWDLDRDENYVLSPDVQFGFEGGECINCVSYCSAKGLLAAGTNKGRIAMWRKAAESDQS
IRALEGKEKWKLQAPTELEGNVTQIKWGSRKNLLAVNVSSVVILSEQAMSSHFHQQVAVV
QVSPSLFNVTIFSTGATHSLHVDMNVNGVFATKDAVVFWNGKQVTVFECSGDTFRSAGSF
LCDSPVLSMHGENLYTVEPCRVQVRTWQGTVKQLLVFSEAEGNPCLLDVCGNFLAVGTDL
AHFKIFDLSRREAKVHCNSKNFSELFPGLGGIASVKCNANGNKVSILVSQVDGNVDSKIC
FYDVEMDKVTLFDFKAEQGNGREKLSSQQGTDKSVVEYPELHSHIPACHFWDQSEPRLFV
CEAILETDLQSPEQKKNETESTMDVWIISFFSTEEHGLLLQESFPLPSAYEVLLGVEVPH
YYFAKKLGEAEKGQAESGSITVSQMVARRPMRDFVGLGDCDKTTRDAMLNFSFYLTAGDM
DEAFKSIKLIKSYCT
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgtacgtggatcaccgaacacaagctcccgattcggttgcctccccttctcat
atagcatggcacccgcttcacccgctcctggcagttggttccatcagcaccacgcccggg
ggctgtgttgatatctacctggaacagggagaacatgtgtccgatgcacatgttgagaga
agctttcaggtcacatcgctttcctggcacccttccagacagattctcgcagcagggtgg
gagatgggagaagttgtgatacttaacaaacaagacaaggagcagcacactgtgccacca
aatcataacgccaaaattgcagtcctaaattggagtacaaatggtacctgccttgtgtct
ggtgatgagcatggtgtcttggtcctgtggagaatggaccagcgaggcagagtgcagggt
cctgccctgctgaaacaagagtatggaaaatgtctgtctcactgtgtctttcggccaccc
cctcctggcgaggactttgtacagctggcaaaagcagctgtgagtggtgatgagaaggcc
ttggatatgtttaactggagaaaagctggaacgggagcacctctgaaaatgggcctccag
gaaggactctccttctttatcactttgacagatggttctgtgcattgtgtgaatgagaaa
ggaaagacaaggcatgtattatccacagacagtctggtccaaaagcttctgtacatggag
aaaagagatgttttagttgtaataacagacaacctgcagttgtccttgcatgcaattact
cttgagggagaggcagaagagctcatgaaggtgaagttgagtgggaagataggccattct
gcagacatcattttaatagaccatagccttgttgttacagcgctaggtgagacggtcatc
aggttctgggatttggacagagatgagaactatgtgctgtccccagatgtgcaatttggc
tttgagggaggagaatgtattaactgtgtgtcttactgcagtgctaaaggtctcttagca
gctggtactaacaaagggagaatagctatgtggaggaaagcagcagaatctgatcagagc
atacgggctttggagggcaaggagaagtggaagctccaggcacctacagaacttgaagga
aatgtcactcagataaagtggggctcccgaaaaaacctgctggcagtgaacgtcagctct
gtggtgatcctcagtgagcaggccatgtcgtctcattttcatcagcaagtggctgttgta
caggtgtctcccagcctgtttaatgtgaccatcttcagcacaggagccacacacagtctt
catgttgatatgaatgttaacggagtctttgctactaaggatgctgtagtattctggaac
gggaagcaagttactgtctttgagtgttcaggagataccttcagaagtgcaggctctttc
ctttgtgactctccagttctgtccatgcatggagaaaatctgtacactgttgaaccctgt
cgggtccaggtccgcacctggcagggcacagttaaacagctgctggtgttctctgaagca
gaggggaatccatgcctcttggatgtctgcggaaatttcctggctgtgggaaccgatttg
gctcattttaaaatctttgatctctctcgcagagaggcaaaagtgcactgcaatagcaag
aacttctctgagctgtttcctggccttggaggcattgcatctgtcaagtgcaatgctaat
ggcaataaagtcagcatccttgttagccaggtggatgggaacgttgattccaagatctgt
ttctatgatgttgaaatggacaaagttacactctttgatttcaaggctgaacagggaaat
ggtagagagaagctttcttctcaacaaggcactgacaagtctgttgtggagtatccagag
ttgcacagtcacatccctgcttgccatttctgggaccagagtgaaccaagactttttgta
tgtgaagcaattcttgaaacagacctacagtctccagagcagaagaaaaatgagactgag
agcacaatggatgtttggattatatcattcttcagtaccgaagagcatggtcttttgctt
caggagagctttccattgccttcagcctatgaggttcttctgggcgtagaggtgccacac
tattactttgcaaaaaagctgggagaagctgagaaaggacaagcagagtctggctcaata
acagtctctcagatggttgcgagaagacccatgagagattttgttggattaggagactgt
gataagactacccgggatgccatgctgaacttcagcttctatctgactgctggagacatg
gatgaggccttcaaatccatcaagctgataaaaagttactgcacatga
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