Leptosomus discolor (cuckoo roller): 104349104
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Entry
104349104 CDS
T08399
Symbol
PRPF8
Name
(RefSeq) pre-mRNA-processing-splicing factor 8
KO
K12856
pre-mRNA-processing factor 8
Organism
ldi
Leptosomus discolor (cuckoo roller)
Pathway
ldi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104349104 (PRPF8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ldi03041
]
104349104 (PRPF8)
Spliceosome [BR:
ldi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
104349104 (PRPF8)
Complex C
U5 SnRNP specific factors
104349104 (PRPF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
104349104
NCBI-ProteinID:
XP_009952842
LinkDB
All DBs
Position
Unknown
AA seq
2312 aa
AA seq
DB search
YMSEEKLQEKARKWQQLQAKRYAEKRKFGFVDAQKEDMPPEHVRKIIRDHGDMTNRKFRH
DKRVYLGALKYMPHAVLKLLENMPMPWEQIRDVPVLYHITGAISFVNEIPWVIEPVYIAQ
WGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDYADNILDVEPLEAIQLELDPEEDAPV
LDWFYDHQPLKDNRKYVNGSTYQRWQFTLPMMSTLYRLANQLLTDLVDDNYFYLFDLKAF
FTSKALNMAIPGGPKFEPLVRDINLQDEDWNEFNDINKIIIRQPIRTEYKIAFPYLYNNL
PHHVHLTWYHTPNVVFIKTEDPDLPAFYFDPLINPISHRHSVKSQEPLPDDDEEFELPEF
VEPFLKDTPLYTDNTANGIALLWAPRPFNLRSGRTRRALDIPLVKNWYREHCPAGQPVKV
RVSYQKLLKYYVLNALKHRPPKAQKKRYLFRSFKATKFFQSTKLDWVEVGLQVCRQGYNM
LNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSRFGNAFHLCREVLRLTKLVVDSHVQ
YRLGNVDAFQLADGLQYIFAHVGQLTGMYRYKYKLMRQIRMCKDLKHLIYYRFNTGPVGK
GPGCGFWAPGWRVWLFFMRGITPLLERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDL
ELRAAVMHDILDMMPEGIKQNKARTILQHLSEAWRCWKANIPWKVPGLPTPIENMILRYV
KAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRLTRLYLKAEQERQHNYLKDGPYITA
EEAVAVYTTTVHWLESRRFSPIPFPPLSYKHDTKLLILALERLKEAYSVKSRLNQSQREE
LGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFMDLYSHLVPVYDVEPLEKITDAYLD
QYLWYEADKRRLFPPWIKPADTEPPPLLVYKWCQGINNLQDVWETSEGECNVMLESRFEK
MYEKIDLTLLNRLLRLIVDHNIADYMTAKNNVVINYKDMNHTNSYGIIRGLQFASFIVQY
YGLVMDLLVLGLHRASEMAGPPQMPNDFLSFQDIATEVAHPIRLFCRYIDRIHIFFRFTA
DEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDARMRLMKHDVNLGRAVFWDIKNRLPR
SVTTVQWENSFVSVYSKDNPNLLFNMCGFECRILPKCRTSYEEFTHKDGVWNLQNEVTKE
RTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKIVNKWNTALIGLMTYFREAVVNTQE
LLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTPKELGGLGMLSMGHVLIPQSDLRWS
KQTDVGITHFRSGMSHEEDQLIPNLYRYIQPWESEFIDSQRVWAEYALKRQEAIAQNRRL
TLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGK
LWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWEGLFWEKASGFEESMKWKKLTNAQR
SGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQ
KIHESIVMDLCQVFDQELDALEIETVQKETIHPRKSYKMNSSCADILLFASYKWNVSRPS
LLADSKDVMDSTTTQKYWIDIQLRWGDYDSHDIERYARAKFLDYTTDNMSIYPSPTGVLI
AIDLAYNLHSAYGNWFPGSKPLIQQAMAKIMKANPALYVLRERIRKGLQLYSSEPTEPYL
SSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIH
TSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIV
IKGSELQLPFQACLKVEKFGDLILKATEPQMVLFNLYDDWLKTISSYTAFSRLILILRAL
HVNNDRAKVILKPDKTTITEPHHIWPTLTDEEWIKVEVQLKDLILADYGKKNNVNVASLT
QSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQLTATQTRTVNKHGDEIITSTTSNYE
TQTFSSKTEWRVRAISAANLHLRTNHIYVSSDDIKETGYTYILPKNVLKKFICISDLRAQ
IAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHLPGQLPQHEYLKEMEPLGWIHTQPN
ESPQLSPQDVTTHAKVMADNPSWDGEKTIIITCSFTPGSCTLTAYKLTPSGYEWGRQNTD
KGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQGSWNYNFMGVRHDPNMKYELQLANPKE
FYHEVHRPSHFLNFALLQEGEVYSADREDLYA
NT seq
6939 nt
NT seq
+upstream
nt +downstream
nt
tacatgtctgaggagaagctgcaggagaaagcccgcaagtggcagcagctgcaggccaag
cgctatgcggagaaaaggaaattcggcttcgtggacgcgcagaaggaggacatgcccccc
gagcacgtccggaagatcatccgtgaccacggcgacatgacaaacaggaagttccgtcac
gacaagcgcgtctacctgggcgctctgaagtacatgcctcatgctgttctgaagctcttg
gagaacatgccgatgccctgggagcaaatcagagacgttccagtcttgtaccacatcaca
ggcgccatctcttttgtgaacgagattccctgggtcatagagccggtgtacattgctcag
tgggggtcaatgtggattatgatgaggcgagagaagagggataggcgtcacttcaagagg
atgaggttccccccgtttgatgatgaagaaccccctctggattatgctgataacatcctg
gatgtggagcctttggaagcgattcagcttgagctggatccggaggaggatgcccctgtg
ctggactggttctatgaccaccagccgctgaaagacaacaggaagtatgtaaacggttca
acgtaccagcgttggcagttcactctcccgatgatgtccacgctgtaccggctggccaat
cagctgctcactgacctcgtggatgacaattatttttatttatttgacctgaaagcgttc
ttcacctccaaggcgctgaacatggctattcctggaggacccaagttcgagcctcttgtt
cgggacatcaatcttcaggatgaagactggaacgaatttaatgacatcaacaagattatc
atcaggcagccaatcaggacagagtacaaaatcgctttcccgtacctgtacaataacctg
ccgcaccatgtccacctgacctggtatcatactccaaacgtcgttttcattaaaacagaa
gatcctgatctcccagctttttacttcgatccgctgatcaaccccatttcacacagacat
tctgtcaagagtcaggaaccgttgcctgatgatgatgaagagtttgagttgccagagttt
gtggaacctttcctgaaggatactccgctgtacacagataacacagccaatggcattgcc
ttgctgtgggccccacggcccttcaacttgaggtctgggaggactcggagagctcttgat
atcccgctggtcaagaactggtatcgtgagcactgcccagcaggccagccagtgaaagtg
cgcgtctcctaccagaagctactgaaatactacgttctgaatgcgctcaagcacagaccc
cccaaggcccagaagaagaggtacctcttccgctccttcaaggctaccaagtttttccag
tcgacgaagctggactgggtggaagtcggcctgcaggtgtgtcgccagggctacaatatg
ctgaacttgctgatccacagaaagaacctgaactaccttcacttggattacaacttcaac
ctgaagccggtgaagaccctcaccactaaggaaaggaaaaaatctcgtttcggtaatgct
ttccatctgtgccgagaggttctgcggctgactaagttggtggtggacagccacgtccag
tacaggcttggaaatgtggatgcgtttcagctggcagacggcttgcagtacatctttgcc
cacgtggggcagctgacgggaatgtaccgatacaagtacaaactgatgaggcagattcgt
atgtgcaaggacctgaagcatctcatctactacaggtttaacacaggccctgtgggcaaa
ggtcccggctgtggcttctgggctccaggctggagagtgtggctgttcttcatgaggggc
atcacaccgctgctggaacgctggctggggaatctgctggccaggcagtttgaaggccgt
cactcaaagggtgtagccaagactgtcacaaagcagcgggtagagtctcactttgacctg
gagctgagggcagccgttatgcatgacattctggacatgatgccagaaggaatcaaacag
aacaaggccagaaccatcctgcagcatctgagcgaggcttggcggtgctggaaggccaat
atcccctggaaggtgccagggctgccgactcctattgagaacatgatcctgaggtacgtg
aaggccaaagctgactggtggacaaacacagctcactacaacagggagcggatccgtcgg
ggtgccactgtagacaaaactgtctgtaagaagaatctgggccggctgaccagactctac
ttgaaagctgagcaggaacgacagcataattacttgaaggacgggccttacatcactgcg
gaagaggctgttgctgtgtacacaaccacagtgcactggctggaaagcaggaggttctca
cccattcccttcccacctctttcctacaagcatgacaccaagttgctcattttagccctg
gagaggctgaaggaagcttacagtgtgaaatctcgcctgaatcagtcacagagagaggag
ttgggcttgattgaacaggcttatgataatcctcatgaagctctgtccagaatcaagcga
caccttttaactcagagagccttcaaggaggtgggtattgagttcatggatctctacagc
cacttagttcctgtttatgatgttgagcccctggagaaaatcacagacgcttacctggat
cagtacttgtggtatgaggctgataagcgaagactcttccctccgtggatcaaacctgct
gacaccgaacctcctccactgttggtgtacaagtggtgccaaggcattaataatctgcaa
gatgtttgggaaacgagtgaaggtgaatgcaacgtgatgctggaatctcgatttgagaag
atgtatgagaagattgacctgacgttgctcaacaggctgttgcgtcttattgttgaccac
aacattgctgactacatgacagccaagaacaacgtggtgatcaactacaaggacatgaat
cacacaaactcctacgggattattcgtgggctgcagtttgcttccttcattgtccagtat
tatgggcttgtgatggacctgctggtgctgggtctgcaccgtgccagtgaaatggccggg
cctccccagatgccgaatgacttcctcagcttccaggacattgccactgaggtggcccat
cccattcgcctcttctgcagatacattgaccggattcacatcttcttcaggtttacagca
gatgaggcgagagacttgattcagcggtacctgacagagcatccagatcccaacaacgag
aacattgtaggctacaacaacaagaagtgctggccccgggatgctcggatgcgactcatg
aaacatgatgtgaaccttggtcgtgctgtgttctgggatatcaagaaccgtttgcctcgc
tcagtcaccacggtgcagtgggagaacagcttcgtgtccgtgtacagcaaggacaacccc
aacttgctgtttaacatgtgcgggttcgagtgccgcatcttgcccaagtgccgcaccagc
tatgaggagttcacccacaaggatggtgtctggaacttgcagaatgaggtcaccaaggag
cgcacagctcagtgcttcctgcgtgtggatgatgagtctatgcagaggttccacaacaga
gtgaggcagatcctcatggcatctggctccacaaccttcactaagattgtcaataagtgg
aatacagctctgattggcttgatgacgtatttccgggaagctgttgtaaatactcaggag
ttgcttgacttgctggtgaaatgcgagaataaaatccagacccgaatcaaaattggtctg
aattccaaaatgcccagccgattcccaccggtggtgttttacacccctaaagagctgggg
gggctgggcatgctctccatgggccacgttctcatcccgcagtctgacctgaggtggtcc
aagcagacggatgttggcatcactcacttccgctcgggaatgagtcacgaggaggaccag
ctcatcccaaatttgtaccgttacatccagccgtgggagagtgaattcattgactctcag
agggtgtgggcagagtatgccctgaagcgccaggaggctatagcccagaacaggcgtctg
acgctagaggacctggaggactcgtgggacaggggaattcctcgtattaacacccttttc
cagaaggaccggcataccctggcttatgataaaggatggagagtcaggactgacttcaag
cagtatcaggtcctgaaacagaacccgttctggtggacccatcagcgccacgatggcaaa
ctctggaacctgaacaactaccgcacggatatgatccaggcacttggtggcgtggaagga
atcctggagcacactctctttaagggcacttacttccccacatgggagggtctcttctgg
gagaaggccagtggctttgaggagtccatgaagtggaagaagctgacaaatgcccagagg
tcgggtttgaaccaaattccaaacagaagattcacgctgtggtggtctcctaccattaac
agagccaacgtgtacgttgggtttcaggtgcagctggatttgacaggcatcttcatgcac
ggcaagatccccacgctgaagatttctctcattcagattttccgagctcacttgtggcaa
aagatccacgagagcatcgtgatggatttgtgtcaggtgtttgatcaagagctggatgct
ctggagattgagacggtgcagaaagagacgatccatcccaggaagtcgtacaagatgaat
tcctcgtgtgcagatatccttctctttgcttcctataagtggaatgtgtcgcgtccgtcg
ttgctcgcagattccaaagatgtgatggacagcaccaccactcagaagtactggatagac
atccagctgcgctggggagattacgattcccacgacatcgagcgctatgccagagccaag
ttcctggactacactacggacaacatgagtatctatccgtctcccacgggtgtgctcatt
gccattgatctggcctacaacttgcacagtgcttatgggaactggttccctgggagcaaa
cccctgatccagcaggctatggccaaaattatgaaagcgaatcctgcgctgtatgtgttg
agagaacgaatccgcaagggcctgcagctgtactcctctgagcccacggaaccctacctt
tcctcccagaactacggagagctcttctccaaccagatcatctggtttgtggacgacacc
aatgtgtacagagtgaccattcacaagacttttgaagggaatttgaccacaaaacccatc
aatggagccattttcatcttcaatcccagaactggacagctcttcctgaagatcatccat
acatctgtgtgggcaggacagaagcgtctaggacagctggccaagtggaagactgctgaa
gaagtggctgccttgattcgctcgcttcctgtggaggagcagcctaagcagatcatcgtg
acacggaagggcatgttggacccacttgaggtgcacttgctggatttccccaatattgtg
atcaaaggctcagagttgcagctgcccttccaggcctgcctgaaagtggagaagtttggt
gatctcatcctgaaggctaccgaaccccagatggttcttttcaacctctatgatgactgg
ctgaaaaccatctcttcctacacggcattctctcgtctgattctgattctccgggcacta
catgtgaacaacgatcgagccaaagttattctgaaaccagacaagacaaccataacggag
cctcaccacatctggccgaccctgaccgatgaggagtggatcaaggtggaggtgcagctg
aaggatctcatccttgctgactatggcaagaagaacaatgtgaacgttgcatccctgacg
cagtcagagatccgagacattatcctgggcatggagatctctgccccctctcagcagaga
cagcagattgcagaaatcgagaagcagaccaaggagcagtcgcaactgacagccacgcag
acccgcaccgttaacaaacacggggatgaaatcatcacctccacgaccagcaactacgag
acccagactttctcctccaagacggagtggcgagtcagagccatttctgctgccaacctc
cacctgcgaacaaaccacatctacgtttcgtcagacgatatcaaggaaacgggctacacc
tacattctgcccaagaacgtgctgaagaaattcatctgcatctcagacctgcgggcccag
atcgcgggttacctgtacggagtgagccctcccgataacccccaagtgaaggagatccgg
tgcattgtgatggtgccccagtggggaacgcaccagaccgtgcatctcccggggcagctg
ccgcagcacgagtatctcaaggaaatggaacctctggggtggattcacacccaaccaaac
gagtcccctcagctctcgccgcaggatgtcaccacccatgccaaggtcatggctgacaac
ccctcctgggatggggagaagacgatcatcatcacctgcagctttacaccaggttcctgc
acgctgacagcctacaaactgaccccgagcggctacgagtggggcaggcagaacacggac
aaagggaacaaccccaagggctacctgccctcccactacgagcgggtgcagatgctgctc
tcggatcgcttcctcggcttcttcatggtcccggcgcaaggctcctggaactacaacttc
atgggtgttcgccacgaccccaacatgaagtacgagctgcagctcgccaaccccaaggag
ttttaccacgaggtccatcgcccttctcacttcctcaacttcgccctgctccaggagggg
gaggtctactccgccgaccgggaggacctctacgcctag
DBGET
integrated database retrieval system
