Leptosomus discolor (cuckoo roller): 104349330
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Entry
104349330 CDS
T08399
Symbol
ARID1A
Name
(RefSeq) AT-rich interactive domain-containing protein 1A
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
ldi
Leptosomus discolor (cuckoo roller)
Pathway
ldi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
ldi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104349330 (ARID1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ldi03000
]
104349330 (ARID1A)
03021 Transcription machinery [BR:
ldi03021
]
104349330 (ARID1A)
03036 Chromosome and associated proteins [BR:
ldi03036
]
104349330 (ARID1A)
Transcription factors [BR:
ldi03000
]
Eukaryotic type
Helix-turn-helix
ARID
104349330 (ARID1A)
Transcription machinery [BR:
ldi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
104349330 (ARID1A)
Chromosome and associated proteins [BR:
ldi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
104349330 (ARID1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
104349330
NCBI-ProteinID:
XP_009953151
LinkDB
All DBs
Position
Unknown
AA seq
1893 aa
AA seq
DB search
MDQMGKMRPQPYGGNNPYTQQQGPQAGPQQGHGYPGQPYGPQTPQRYPMGMQSRTQSTMG
SISYAQQIPPYGQQGPSAYGQQSQTPYYNQQSPHPQQQQPPYSQQPPSQTPHSQPSYQQQ
QQPQSQPPQLQTSQPAYSQQQSQPPHQQSPTPYAPQQSTAQQHQQSQPPYSQQQSQSPYQ
QQQQTQQTASSALSQQSSSYPQSQPQQQQSAYSQQRFPPPQELSQDSFGSQASSAPSMAS
SKGQEDMNLNLQSRPSSLPDLSGSIDDLPMGTEGALSPGVSTSGISSSQGEQSNPAQSPF
SPHTSPHLPGIRGPSPSPVGSPASVAQSRSGPLSPAAVPGNQMPPRPPSGQSDSIMHPSM
NQSSIAQDRGYMQRNPQMPQYSSPQPGSALSPRQSSGGQMHAGMGPYQQNSMGSYGPQGG
QYGPQGGYPRQPNYNAMSNANYPSPGMGGSMNPMGAASQMHGQTGVPPYSGLPPGRMSHA
TMGNRPYGPNMANMPPQVGTGMCPPPGGMNRKAQEAAAAAMHAAANSIQNRPPGYPNMNQ
GGMMGTGPPYGQGINSMAGMINPQGPPYPMGGNMANNSAGMAASPEMMGLGDVKLTPATK
MNNKADGTPKAESKSKKSSSSTTTNEKITKLYELGGEPERKIWVDRYLAFTEEKAMGMTN
LPAVGRKPLDLYRLYISVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCL
YAFECKIERGEDPPPDIFAAADSKKSQTKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDL
KPPTPASTPHSQMPPLPGIRSNSVGLQDAFADGSDPTFQKRNSMTPNPGYQPSMNTSDMM
GRMSYEPNKDPYSSMRKAPGSDPFMSSGQGPNSGMGDPYNRAAGPGMGNMAMGQRQHYSY
GGPYDRVRTEPGMGPEGNLATGTPQPNIMPSTPESGMYSPSRYPQQQQQQQRHDSYGNQF
PAQGTSSGSPFPSQQTTMYQQQQQNYKRPMDGSYGPPAKRHEGEMYNVPYSAGQGQTQQQ
LPPAQTQQPSQQQTAQPSPQQDLYNQYGSTYPAADRRSAGGPQNQFPFQFGRDRVSAPPG
SNAQQNLPPQMMGGPLQSAPEGPQQGAMWQGRNEIGYSYPNRQSTGSAPQGPAYHGVTRT
DEILHSDQRVNHEGPWPSHGNRQPPYGPSAPVPPMTRPPQSNYQTPPSMQNHIPQVSSPA
PLPRPLENRTSPSKSPFLHSGMKMQKAGPPVPASHITPAAVQPPMIRRDITFPPGSVEAT
QPVLKQRRRLTAKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSIMTFNLSQL
PGLLELLVEYFRRCLIEIFGILKEYEVGDPGQRTLLDPERFCKSSASSHEEGEEEDDPRS
LNCEEEDDDEEEEEAAFSSKDKVPLESSEEKLVSKFDKLPVKVVQKNDPFVVDYSDKLGR
VQEFESGLLHWRIGGGDTTEHIQTHFESKTELPLTHKRASCNSVLRKRSAAESNPSTREG
ETPPSDSSSEKRITATMDDMLSARPGSLAGEEEEVKALETAKESSKFPFGISPAQSHRNI
KILEDEPHSKDETPLCTLLDWQDSLAKRCICVSNIIRSLSFVPGNDFEMSKHPGLLLILG
KLILLHHKHPERKQAPLTYEKEEEQDQGVSCNKVEWWWDCLEMLRENTLVTLANISGQLD
LSPYPESICLPILDGLLHWAVCPSAEAQDPFPTLGPNAVLSPQRLVLETLSKLSIQDNNV
DLILATPPFSRLEKLYSTMVRFLSDRKNPVCREMAVVLLANLAQGDSLAARAIAVQKGSI
GNLLGFLEDSLAATQFQQSQAGLMHMQNPPFESTSVDMMRRAARALLALAKVDENHSEFT
LYESRLLDISVSPLMNSLVSQVICDVLFLIGQS
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atggatcagatggggaagatgaggcctcagccgtatggaggaaacaacccgtacacacaa
cagcagggacctcaggcggggccacagcaaggacatggctatccgggacagccgtatggg
ccgcaaactccccagagatatcccatgggaatgcaaagcaggacgcaaagtacaatgggc
agcatctcatatgcacagcagattcctccttacggacagcagggccccagtgcatatggg
cagcaaagccagactccgtattacaaccagcaaagccctcatccccaacagcagcagcct
ccatattcccagcagcctccatcccagacccctcactctcagccttcttatcagcagcag
caacagcctcagtctcaacctccacaacttcagacatcgcagcctgcctattcgcagcag
cagtcccagccgccccatcagcagtccccaactccatacgctccacagcagtccacggcc
cagcaacaccaacagagtcagcctccctactcacagcagcagtcacagtcgccctaccag
cagcagcaacaaactcagcagacggcttcctcggctctttctcagcagtcatcttcatac
cctcagtcacagccgcagcagcagcagtctgcgtactcccagcaacgcttcccccctcct
caggagttatctcaagactcatttgggtcccaggcatcatctgctccctcaatggcttcc
agtaaagggcaagaagatatgaacttgaatcttcagtccagaccttctagcctgccggac
ctgtctggttcaatagatgatctacccatgggtacagaaggagccctgagtcctggagtg
agcacatcagggatttccagcagtcaaggagagcagagtaacccagctcagtctcctttc
tctccacatacctctcctcacctgccaggcatcagaggaccctctccatccccagttgga
tctccagctagcgttgctcagtcccgctctggtccactttcacctgctgcagtaccaggc
aatcagatgccgccccgaccgcccagtggccagtcggacagtatcatgcatccttccatg
aaccagtcaagcatagcgcaagatcgaggttacatgcagaggaatcctcagatgccccag
tacagctcaccccagcctggctcagccttatctccccgtcagtcttctggaggacagatg
cacgctggaatggggccataccagcagaactccatgggaagctacggaccccagggtggg
cagtacggacctcaaggaggttatcccaggcagccaaactacaacgctatgtccaatgcc
aactaccccagtccaggaatgggaggaagcatgaaccccatgggagcagcgagccagatg
catgggcagactggtgtgccaccatacagtgggcttcctccggggaggatgagccatgca
accatggggaacagaccttacggacctaacatggcgaatatgccacctcaggtggggaca
gggatgtgccccccaccaggtggcatgaatcgcaaagcacaagaagcggctgccgccgcc
atgcacgctgctgccaactccatccagaacaggcctcctggttatcccaacatgaatcaa
gggggaatgatgggcactggacctccttatggacagggaattaacagtatggctggcatg
ataaacccccagggcccaccctatccgatgggtgggaatatggccaacaactctgcaggg
atggccgcaagcccggaaatgatgggtcttggggacgtcaaattaacacctgcaactaag
atgaacaataaggcagatgggacgccgaaagcagaatccaagtcaaagaagtccagttcc
tctactacaaccaatgagaagatcaccaaactctatgagctgggtggtgagcccgagagg
aagatctgggtagatcgttacctggcctttactgaagagaaggccatgggcatgacaaat
ctcccagcggtaggcaggaaacccttggacctttaccggctctacatctcagtgaaggag
attggaggattgactcaggtcaacaaaaacaagaaatggcgtgagttggccacaaatctc
aatgtgggcacgtccagcagtgcagctagttctttgaagaagcagtacatccagtgtctc
tatgcctttgagtgcaagattgagcgaggtgaagacccccctccagatatctttgcagct
gccgattcaaagaagtctcagactaagatacagcctccatctccagcgggttcaggctca
atgcagggtcctcagacacctcagtccaccagcagctccatggcagaaggaggagattta
aagccaccaactccagcatctacgccacacagtcagatgccccctttgccaggcatcagg
agtaactcagtgggccttcaggatgcctttgcagatggtagtgatcctacgttccagaaa
cggaactccatgactccaaatccagggtaccagcccagcatgaatacctccgacatgatg
ggtcgcatgtcttacgagccaaataaagatccttacagcagtatgaggaaagctccagga
agcgatcccttcatgtcctcagggcagggccccaacagtggtatgggtgacccttacaat
cgtgctgcaggtccagggatgggtaacatggccatgggacagcggcaacactattcctat
ggaggtccttacgacagagtgaggacggagcccggcatgggacctgagggcaacttagca
accggaactccgcagccaaacatcatgccttccacccctgaatcggggatgtattctccc
agccgctacccgcagcagcagcagcagcagcaaagacatgattcctatggcaatcaattc
cctgctcaaggcacatcctcgggcagccccttccctagccagcaaactaccatgtatcaa
cagcaacagcagaattacaagcgaccgatggacggcagctacggcccgcccgccaagcgc
cacgaaggggagatgtacaacgtaccgtacagcgccgggcaggggcagacgcagcagcag
ctgcctccagcacagacccagcaaccgagccagcagcaaactgcacagccgtctccacag
caggacctgtataaccagtacgggagtacctaccctgctgctgaccgccgatctgccgga
gggccgcagaaccagttcccattccaatttggcagagacagggtctcggctcccccgggc
tccaatgctcagcaaaacttgcctcctcagatgatggggggtcccctacagtctgctcca
gagggcccgcagcaaggcgccatgtggcaagggcgcaatgaaatagggtacagctatccg
aatcggcagagcaccggctctgcgccccaggggcctgcttatcacggagtgactcgaaca
gatgaaattctgcattcagaccagagggtcaaccatgagggaccatggccttcccacggg
aaccggcaacctccttatggtccctctgcccccgtgcccccaatgactaggccccctcag
tccaactaccagaccccccctagcatgcagaatcacattcctcaggtatccagcccagca
cctctgcccagacctctggagaatcgcacttctcctagtaaatctccattcctgcactcg
gggatgaaaatgcagaaggcaggaccgccagtccctgcctcgcatataacaccagcagct
gtacagcctcccatgatccgacgagacatcaccttccctccgggatcagtagaagccacg
caacctgtgttgaagcagcggaggcggctgacggcaaaagatattggaactcctgaagcc
tggagagtgatgatgtctctgaagtccgggctgctagctgaaagcacgtgggccttagat
accataaacatcctgctctatgatgacaacagcataatgaccttcaacctcagccagctg
ccaggcttgctggaactcttggtcgagtatttccggcgctgcctgatcgagatctttgga
atcctgaaggaatacgaggtgggagacccagggcaaagaacactattagatcctgaaagg
ttctgcaaatcttccgcttcctctcatgaagaaggggaggaggaggatgatccacggagc
ctaaactgtgaggaggaagacgacgacgaggaagaggaggaggctgcgttttcgagcaag
gacaaagtacctctagagagcagcgaggaaaaactagttagtaaatttgacaagcttccg
gtcaaggtcgtgcagaaaaacgacccgtttgtggtagattattcagacaagttggggcga
gtgcaggagttcgagagcggcctgctgcactggcggatcggcggcggagacaccaccgag
cacatccagacccactttgagagcaagacggagctacctttgactcataaacgagcttcc
tgcaactctgtcttgaggaaacgttcagcagctgagagcaatccgagcactagggaagga
gagactcctccatccgacagctcctcggagaagaggataactgccaccatggacgacatg
ctttcggcacgtcccggctccctggcaggggaggaggaagaggtcaaagctttggaaacg
gcgaaggaaagcagcaagtttccctttggcattagtccagctcagagccacagaaatata
aaaattctggaggacgaacctcacagtaaagacgagacgccgctctgcaccctcctagac
tggcaggactctctggccaagcgctgcatctgtgtctctaacatcatcaggagtttatcg
ttcgtgccgggcaatgactttgagatgtctaaacatcccgggctgctgctgattctaggg
aaactgattctcttacaccacaagcatccagaacgcaaacaggcacccctgacctatgag
aaagaggaggagcaggaccaaggggtgagctgcaacaaggtggagtggtggtgggactgc
ttggagatgctgcgtgaaaatacgctggtcacgttggccaacatttctggccagctggac
ctgtccccttacccggaaagcatctgtttgcccatcctggatggactcctccactgggca
gtatgtccgtcagcagaggcccaggatccctttccaacactggggcccaacgcggtcctc
tcccctcagagactggttttggaaacacttagcaaactcagcatccaggacaacaatgtg
gatttgattcttgcaactccccccttcagtcgcttggagaagctgtacagcaccatggtg
cggttccttagtgacagaaagaacccggtgtgtcgagagatggctgtggtactactggcc
aacttggcacagggggacagcctggcagcaagagcgattgctgtgcagaagggcagcatt
ggcaacttgctgggcttcttggaggacagcctggccgccacgcagttccagcagagccag
gccggcttgatgcacatgcagaacccaccctttgagtcgacgagcgtggacatgatgcgc
cgagctgctcgggcgctgctcgccctggccaaggtggacgagaaccactcggagttcacg
ttatacgagtcgcggctgttggacatctccgtgtcgcctttgatgaactctttggtttca
caagttatttgtgatgtactgtttttaattggccagtcatga
DBGET
integrated database retrieval system
